Homology
BLAST of mRNA_C-linearis_contig101.723.1 vs. uniprot
Match:
D7G071_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G071_ECTSI)
HSP 1 Score: 298 bits (764), Expect = 1.640e-100
Identity = 162/215 (75.35%), Postives = 173/215 (80.47%), Query Frame = 0
Query: 1 MRSSRAIAAGAVAVLAVLLCHH-RGQAFFVGNPAAGLLDRAGYSRNQVQAH-----RSAGVIRSRLTATMTMTPETTEDTVSVLNDDGTRKTGEQIREEFFMAALTGQERGLPPGSYLNDTVDEGPDVAQVSVVWQPYEDKVSAPAGSNLLRSALGCGAMVLDNTFCLTGQCEACMAEVDGNVVLSCMVPVPNDGRTDVEALVCDSDAAWDDMMV 209
M SRA+AA AVA V L H RGQAFFVG PA L A YSR R AGV+R+RLTATM PE T DTV+VLNDDGTRK+GEQIREEFFMAA+TGQERGLPPGSYLNDTV+ GP V QVSVVWQPYEDKV APAGS+LL+SA CGAMV+DNTFCLTGQCEACMAEVDG VVLSCMVPVP DGRTDVEALVC+SDAAWDDMMV
Sbjct: 1 MSFSRAVAASAVAAFGVFLSHQQRGQAFFVGTPAVDLRRTAVYSRGLAAGSISKKGRRAGVVRARLTATMA--PEQT-DTVNVLNDDGTRKSGEQIREEFFMAAMTGQERGLPPGSYLNDTVEAGPGVEQVSVVWQPYEDKVLAPAGSSLLKSATECGAMVIDNTFCLTGQCEACMAEVDGEVVLSCMVPVPADGRTDVEALVCNSDAAWDDMMV 212
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig101.723.1 vs. uniprot
Analysis Date: 2022-09-16 (
Diamond blastp: OGS1.0 vs UniRef90 )
Total hits: 1
M R S S R A I A A G A V A V L A V L L C H H R G Q A F F V G N P A A G L L D R A G Y S R N Q V Q A H R S A G V I R S R L T A T M T M T P E T T E D T V S V L N D D G T R K T G E Q I R E E F F M A A L T G Q E R G L P P G S Y L N D T V D E G P D V A Q V S V V W Q P Y E D K V S A P A G S N L L R S A L G C G A M V L D N T F C L T G Q C E A C M A E V D G N V V L S C M V P V P N D G R T D V E A L V C D S D A A W D D M M V * 20 40 60 80 100 120 140 160 180 200 Expect = 1.64e-100 / Id = 75.35 Sequence D7G071_ECTSI
Match Name E-value Identity Description
D7G071_ECTSI 1.640e-100 75.35 Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name:
InterProScan on OGS1.0
Date Performed: 2022-09-29
M R S S R A I A A G A V A V L A V L L C H H R G Q A F F V G N P A A G L L D R A G Y S R N Q V Q A H R S A G V I R S R L T A T M T M T P E T T E D T V S V L N D D G T R K T G E Q I R E E F F M A A L T G Q E R G L P P G S Y L N D T V D E G P D V A Q V S V V W Q P Y E D K V S A P A G S N L L R S A L G C G A M V L D N T F C L T G Q C E A C M A E V D G N V V L S C M V P V P N D G R T D V E A L V C D S D A A W D D M M V * 20 40 60 80 100 120 140 160 180 200 Score = Score = Score = Score = Score = Score = 0.71 Score = Sequence SIGNAL_PEPTIDE_N_REGION SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION NON_CYTOPLASMIC_DOMAIN SIGNAL_PEPTIDE SignalP-noTM SSF54292
IPR Term IPR Description Source Source Term Source Description Alignment
None No IPR available PHOBIUS SIGNAL_PEPTIDE_N_REGION Signal peptide N-region coord: 1..5 None No IPR available PHOBIUS SIGNAL_PEPTIDE_C_REGION Signal peptide C-region coord: 22..26 None No IPR available PHOBIUS SIGNAL_PEPTIDE_H_REGION Signal peptide H-region coord: 6..21 None No IPR available PHOBIUS NON_CYTOPLASMIC_DOMAIN Non cytoplasmic domain coord: 27..209 None No IPR available PHOBIUS SIGNAL_PEPTIDE Signal Peptide coord: 1..26 None No IPR available SIGNALP_EUK SignalP-noTM SignalP-noTM coord: 1..26 IPR036010 2Fe-2S ferredoxin-like superfamily SUPERFAMILY 54292 2Fe-2S ferredoxin-like coord: 125..188
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence
>prot_C-linearis_contig101.723.1 ID=prot_C-linearis_contig101.723.1|Name=mRNA_C-linearis_contig101.723.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=210bp back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
Term Definition
IPR036010 2Fe-2S_ferredoxin-like_sf