prot_C-linearis_contig10.589.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig10.589.1
Unique Nameprot_C-linearis_contig10.589.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length183
Homology
BLAST of mRNA_C-linearis_contig10.589.1 vs. uniprot
Match: D7G8P7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8P7_ECTSI)

HSP 1 Score: 263 bits (673), Expect = 1.450e-87
Identity = 142/182 (78.02%), Postives = 164/182 (90.11%), Query Frame = 0
Query:    1 MDEDVALAALLTALEDLHNIRNEMHA--SQGFLNMAKARRTMGRNSVSVLDTREQYSAEVTISIDAECDSEGRLEASKSIFSRNRIEAATPPVVVRDGSLRQRGGVVAPVEIEESLLQPDQDAPVRGDSMSLFATLVPPPLRKSKKNFTSVVEYAVEASNLAHRILYLREVLGDAKGQLPAE 180
            MDED AL+ALLTAL+DLHNIRNEMH    QGFLNMA+ARR+MGRNSVSVLDTRE+Y+AEVTI+I+ E  SEGRL+ S+S+FSRNR+E A   VV+RDGSLRQRGG  A VEIEESLLQPDQDAPVRGDSMSLFATLVPPPLRKSKKNFTSVV+YAVEASNLAHRI++L+++L +AKGQ+P +
Sbjct:    1 MDEDAALSALLTALDDLHNIRNEMHTCLKQGFLNMARARRSMGRNSVSVLDTREEYAAEVTIAIE-EDTSEGRLQESRSMFSRNRVEPAGSAVVIRDGSLRQRGGGGAHVEIEESLLQPDQDAPVRGDSMSLFATLVPPPLRKSKKNFTSVVDYAVEASNLAHRIIHLQKML-EAKGQMPKD 180          
BLAST of mRNA_C-linearis_contig10.589.1 vs. uniprot
Match: A0A7S2H454_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2H454_9STRA)

HSP 1 Score: 79.3 bits (194), Expect = 2.560e-15
Identity = 55/173 (31.79%), Postives = 91/173 (52.60%), Query Frame = 0
Query:    2 DEDVALAALLTALEDLHNIRNEMHAS--QGFLNMAKARRTMGRNSVSVLDTREQYSAEVTISIDAECDSEGRLEASKSIFSRNRIEAATPPVVVRDGSLRQRGGVVAPVEIEESLLQPDQDAPVRGDSMSLFATLVPPPLRKSKKNFTSVVEYAVEASNLAHRILYLREVLGD 172
            D D  L ++L+  ++ +  +  +  +  +GFLNMAKAR+++GR S++ LD RE   A+ TI    +CD          I+ R+      P     + +LR+RG      +  E +    + A    D M LF  LVPPP+R++ + FT+ +E+ V A+NLA +I+   + L D
Sbjct:    4 DADSKLLSILSQTDEFYAEQQRIAKAIRKGFLNMAKARQSLGRGSLTALDCRENVCAQFTIDAHTDCD---------DIWRRHSDTLNAP----EEKALRRRGAG-GNGKTNEDIQSVSEGAEDHNDPMLLFGGLVPPPMRRAGQEFTAAIEHIVTAANLAAKIIESEKELRD 162          
BLAST of mRNA_C-linearis_contig10.589.1 vs. uniprot
Match: A0A7S2BYK8_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BYK8_9STRA)

HSP 1 Score: 78.2 bits (191), Expect = 1.820e-14
Identity = 57/174 (32.76%), Postives = 95/174 (54.60%), Query Frame = 0
Query:    3 EDVALAALLTALEDLHNIRNEMHAS--QGFLNMAKARRTMGRNSVSVLDTREQYSAEVTISIDAECDSEGRLEASKSIFSRNRIEAATPPVVVRDGSLRQRG--GVVAPVEIEESLLQPDQDAPVRGDSMS---------LFATLVPPPLRKSKKNFTSVVEYAVEASNLAHRI 163
            ED AL AL   ++ L+  +  +  S  +GFLN+ KAR++MGRN++S L+ RE   A+V +    E       E +  ++ R+R       V  ++G++R+RG  G+  P++ E+++     D P   D++          LF  LVPPP+RK+K +F   VE+ + A+N+A  I
Sbjct:   12 EDEALVALFEKVDGLYAEQQRIAKSMRKGFLNITKARQSMGRNALSALNCRELVDAQVRVDATHE-------EDAGMLWERHRESPGA--VASQNGAVRRRGAGGLSGPID-EDTVSSHTPDEPAADDAVQGAAQKNTLMLFGGLVPPPMRKAKADFALAVEHCIAAANVAQSI 175          
BLAST of mRNA_C-linearis_contig10.589.1 vs. uniprot
Match: A0A7S2S2U0_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S2U0_9STRA)

HSP 1 Score: 70.1 bits (170), Expect = 3.500e-11
Identity = 50/157 (31.85%), Postives = 86/157 (54.78%), Query Frame = 0
Query:   28 QGFLNMAKARRTMGRNSVSVLDTREQYSAEVTISIDAECDSEGRLEASKSIFSRNRIEAATPPVVVRDGS--LRQRGGVVAPVEIEESLLQPDQDAPVRGDSMSLFATLVPPPLRKSKKNFTSVVEYAVEASNLAHRILYLREVLGDAKGQLPAERA 182
            +GFLN+ KAR++MGR +++ LD RE+  A  + S+D    S+   +++  ++ R R  A+      R G+  LR+RG      +  E+    D++   R D + LF  LVPP LR+++ +F   +++ + A+N+ HR + LR  +GD     P   A
Sbjct:   41 RGFLNVTKARQSMGRGALTALDCREEMVA--SFSLDQSDVSQVDEQSALILWRRFRRVAS------RSGAKTLRRRGSTPPSSDEPENTSVDDREE-AREDPVLLFGGLVPPTLRRAQADFQVALDFYISAANVIHRAMQLRARIGDLPAASPGPEA 188          
BLAST of mRNA_C-linearis_contig10.589.1 vs. uniprot
Match: A0A835YMR8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YMR8_9STRA)

HSP 1 Score: 70.1 bits (170), Expect = 3.650e-11
Identity = 61/174 (35.06%), Postives = 83/174 (47.70%), Query Frame = 0
Query:    9 ALLTALEDLHNIRNEMHA--SQGFLNMAKARRTMGRNS----VSVLDTREQYSAEVTISI---DAECDSEGRLEASK----SIFSRNRIEAA---TPPVVVRDGSLRQRGGVVAPVEIEESLLQPDQDAPVRGDSMSLFATLVPPPLRKSKKNFTSVVEYAVEASNLAHRILYL 166
            ALL A ++LHN + E+     QGF NM KAR   G  +    ++VLDTRE++ A VT+ +   D +      L A K      F R   + A   +   V    SLRQR    +              A    DSM LF  LVPP LRK+K+NF+S ++Y   A+ L  R+  L
Sbjct:   28 ALLEAADELHNAKAELSLCLKQGFFNMTKARLAAGGGAHSAGITVLDTREEFHAAVTVELLDKDPDASPARELRALKLPAGHAFQRAGNDDAPHSSGGSVNGSSSLRQRNHAGSXXXXXXXXXXXXXAA--GKDSMQLFGGLVPPALRKAKRNFSSALDYVFLAAELTQRVALL 199          
BLAST of mRNA_C-linearis_contig10.589.1 vs. uniprot
Match: A0A2C9M4G9_BIOGL (Uncharacterized protein n=1 Tax=Biomphalaria glabrata TaxID=6526 RepID=A0A2C9M4G9_BIOGL)

HSP 1 Score: 56.2 bits (134), Expect = 1.540e-6
Identity = 52/172 (30.23%), Postives = 79/172 (45.93%), Query Frame = 0
Query:   28 QGFLNMAKARRTMGRNSVS---VLDTREQYSAEVTISIDAECDSEGRLEASKSIFSR--------NRIEAATPPVVVRDGSL-------------------RQRGGVVAPVEIEESLLQPDQDAPVR--GDSMSLFATLVPPPLRKSKKNFTSVVEYAVEASNLAHRILYLR 167
            QGFL+M++AR++MG  +VS   ++      S +V +  D    S       + +F          +  E  TPPV+  D S                    ++ G  VAP ++E S    D D   R   +S+SLF  LVPP LR S+K+F   ++  VE +NL HR+  L+
Sbjct:    3 QGFLDMSRARKSMGVKNVSADQIISANILASVKVNVDEDLIQPSNEEEVGERELFQMLQNADKKFDEQEKTTPPVISSDSSSGPRKRHTEKSSKSDPDKQDKENGTKVAP-QVESS---EDSDISNRVVTNSLSLFGILVPPTLRASQKHFNDSLKVCVELANLKHRLHILK 170          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig10.589.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D7G8P7_ECTSI1.450e-8778.02Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S2H454_9STRA2.560e-1531.79Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S2BYK8_9STRA1.820e-1432.76Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A7S2S2U0_9STRA3.500e-1131.85Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A835YMR8_9STRA3.650e-1135.06Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A2C9M4G9_BIOGL1.540e-630.23Uncharacterized protein n=1 Tax=Biomphalaria glabr... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR040357Vma22/CCDC115PANTHERPTHR31996FAMILY NOT NAMEDcoord: 3..167

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig10contigC-linearis_contig10:2717328..2718475 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig10.589.1mRNA_C-linearis_contig10.589.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig10 2717328..2720464 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig10.589.1 ID=prot_C-linearis_contig10.589.1|Name=mRNA_C-linearis_contig10.589.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=183bp
MDEDVALAALLTALEDLHNIRNEMHASQGFLNMAKARRTMGRNSVSVLDT
REQYSAEVTISIDAECDSEGRLEASKSIFSRNRIEAATPPVVVRDGSLRQ
RGGVVAPVEIEESLLQPDQDAPVRGDSMSLFATLVPPPLRKSKKNFTSVV
EYAVEASNLAHRILYLREVLGDAKGQLPAERA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR040357Vma22/CCDC115