prot_C-linearis_contig10.555.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig10.555.1
Unique Nameprot_C-linearis_contig10.555.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length226
Homology
BLAST of mRNA_C-linearis_contig10.555.1 vs. uniprot
Match: A0A6H5JJK0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJK0_9PHAE)

HSP 1 Score: 266 bits (681), Expect = 6.470e-79
Identity = 139/222 (62.61%), Postives = 167/222 (75.23%), Query Frame = 0
Query:    1 GKDQLQVLFEGIAREDRMVPTVQHRFNSVDDVIQHLTLVVWADTRPRLVVLDDVWEREVVDTLQPTGLQLLVDTRRSSVVAAGGGRTDVGGMERAQAHELLKKKSCAVALPETEAGQVAEACGWHALTLAIAGTLRSVTSSPNSAPTWQALHSEIVRKKATARGPRMETDVGDDPTKLLLLPVLDLSLDSLGKDEQHLFLGLVVLARGVLAPVPMLASIWQN 222
            G+DQLQ LFE + R       +  RFNS +++IQ+LT++V  D  PRLVVLDDVWER VVDTL+PTGL+LLV TR  SVVA  GGRT VG M+  +A ELLK +S A+ALP+TEA QVA ACGWHALTLAIAG+LR V   PNSA TW+ L SE+ + K + RGP+M+ D+GDDPTK  L PVL+LSL+SLG D + LFL L+VLARGV AP PMLASIW  
Sbjct:  296 GEDQLQALFEALTRGAFPAAKLPPRFNSPEEIIQYLTVLVAEDKLPRLVVLDDVWERAVVDTLRPTGLRLLVTTRLDSVVAMRGGRTTVGNMDGGEARELLKSRSGAIALPKTEADQVAAACGWHALTLAIAGSLRFVKDDPNSASTWRRLASEMTQTKNSVRGPKMDADIGDDPTKKSLFPVLELSLESLGGDRERLFLSLLVLARGVSAPAPMLASIWDK 517          
BLAST of mRNA_C-linearis_contig10.555.1 vs. uniprot
Match: A0A6H5JSG2_9PHAE (AAA domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSG2_9PHAE)

HSP 1 Score: 186 bits (471), Expect = 1.180e-50
Identity = 112/223 (50.22%), Postives = 142/223 (63.68%), Query Frame = 0
Query:    1 GKDQLQVLFEGIAREDRMVPTVQHRFNSVDDVIQHLTLVVWADTR-PRLVVLDDVWEREVVDTLQPTGLQLLVDTRRSSVVAAGGGRTDVGGMERAQAHELLKKKSCAVALPETEAGQVAEACGWHALTLAIAGTLRSVTSSPNSAPTWQALHSEIVRKKATARGPRMETDVGDDPTKLLLLPVLDLSLDSLGKDEQHLFLGLVVLARGVLAPVPMLASIWQN 222
            G  +L  L E +ARE   +  V    + +DD ++ +   V  D   PRL++LDDVW  EVV+ L+PTGLQ++V TR +SV    G    VG ME  +A ELL+KKS AVALP  EA QVA  CG H LTLAIAG+LR V  +P+SA  W+ LHSEI R K + RG +M TD  ++P++  L PVL LS + L   EQ  FL LVVLARGV APV MLA++W  
Sbjct:  278 GNLKLPALVERLARE---MDVVSENMDGLDDCVRDIAFAVARDNSVPRLLILDDVWHEEVVNALRPTGLQIVVTTRLASV----GRGMIVGDMEDGEARELLRKKSGAVALPAPEANQVARDCGCHPLTLAIAGSLRCVREAPDSALAWRELHSEIGRIKRSRRGLQMTTDSDEEPSQSPLFPVLRLSFERLRVQEQDSFLSLVVLARGVPAPVAMLANLWDK 493          
BLAST of mRNA_C-linearis_contig10.555.1 vs. uniprot
Match: D7G7W8_ECTSI (NB-ARC and TPR repeat-containig protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7W8_ECTSI)

HSP 1 Score: 185 bits (469), Expect = 3.970e-50
Identity = 112/223 (50.22%), Postives = 140/223 (62.78%), Query Frame = 0
Query:    1 GKDQLQVLFEGIAREDRMVPTVQHRFNSVDDVIQHLTLVVWADTR-PRLVVLDDVWEREVVDTLQPTGLQLLVDTRRSSVVAAGGGRTDVGGMERAQAHELLKKKSCAVALPETEAGQVAEACGWHALTLAIAGTLRSVTSSPNSAPTWQALHSEIVRKKATARGPRMETDVGDDPTKLLLLPVLDLSLDSLGKDEQHLFLGLVVLARGVLAPVPMLASIWQN 222
            G  +L  L + +ARE   +  V    + +DD ++ +   V  D   PRL+VLDDVW  EV+D L+PTGLQ+LV TR +SV   G G   VG ME  +A ELL KKS AVALP  EA QVA  CG H LTL IAG+LR V  +P+SA  W+ LHSEI R K ++RG  M TD  ++P++  L PVL LS + L   EQ  FL L VLARGV APV MLA++W  
Sbjct:  278 GNLKLPALVQRLARE---MDVVSENMDGLDDCVRDIAFAVARDNSVPRLLVLDDVWHEEVMDALRPTGLQILVTTRLASV---GRGML-VGDMEEGEARELLSKKSGAVALPVPEANQVARDCGCHPLTLVIAGSLRCVREAPDSALAWRELHSEIERIKRSSRGLEMATDSDEEPSQSSLFPVLSLSFERLKVQEQDSFLSLAVLARGVPAPVAMLANLWDK 493          
BLAST of mRNA_C-linearis_contig10.555.1 vs. uniprot
Match: A0A6H5J6Q8_9PHAE (NB-ARC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J6Q8_9PHAE)

HSP 1 Score: 181 bits (458), Expect = 2.130e-49
Identity = 110/223 (49.33%), Postives = 133/223 (59.64%), Query Frame = 0
Query:    1 GKDQLQVLFEGIAREDRMVPTVQHRFNSVDDVIQHLTLVVWADTRPRLVVLDDVWEREVVDTLQPTGLQLLVDTRRSSVVAAGGGRTDVGGMERAQAHELLKKKSCAVALPETEAGQVAEACGWHALTLAIAGTLRSVTSSPNSAPTWQALHSEIVRKKATARGPRMETDVGDDPTKLLLLPVLDLSLDSLGKDEQHLFLGLVVLARGVLAPVPMLASIWQNV 223
            G+DQL  L + +AR+      +  +FNS++D+IQHLT+VV  D  PRL+VLDDV ER VVDTL+PTGL+LLV TR  S+VA  GGRT VG M+RA+A ELLK KS A+ LPETEA Q                                           T  GP+M+ D+GD+PTK  L  VLDLSL  LG+ +  LFL LVVLARGV AP PMLASIW  V
Sbjct:  251 GEDQLFALCDILARKVTPATKLPQQFNSLEDIIQHLTVVVAEDRLPRLMVLDDVLERAVVDTLRPTGLRLLVTTRLDSLVAVRGGRTVVGNMDRAEARELLKSKSGAIELPETEADQT-----------------------------------------KTILGPQMDADIGDNPTKESLFHVLDLSLKYLGRHQHRLFLSLVVLARGVSAPAPMLASIWDMV 432          
BLAST of mRNA_C-linearis_contig10.555.1 vs. uniprot
Match: A0A6H5KK53_9PHAE (NB-ARC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KK53_9PHAE)

HSP 1 Score: 137 bits (345), Expect = 8.730e-35
Identity = 74/118 (62.71%), Postives = 87/118 (73.73%), Query Frame = 0
Query:    1 GKDQLQVLFEGIAREDRMVPTVQHRFNSVDDVIQHLTLVVWADTRPRLVVLDDVWEREVVDTLQPTGLQLLVDTRRSSVVAAGGGRTDVGGMERAQAHELLKKKSCAVALPETEAGQV 118
            G+DQLQ LFEG+AR       +  RFNS++++IQHLT++V  D  PRLVVLDDVWER VVD L+PTGL+LLV TR  SVVA  GGRT VG M   +A ELLK KS A+ LPETEA QV
Sbjct:  293 GEDQLQALFEGLARLAIPEAKLPQRFNSLEEIIQHLTVLVAEDKLPRLVVLDDVWERAVVDILRPTGLRLLVTTRLDSVVAVRGGRTVVGNMATGEARELLKSKSGAITLPETEADQV 410          
BLAST of mRNA_C-linearis_contig10.555.1 vs. uniprot
Match: A0A6H5LJA6_9PHAE (NB-ARC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LJA6_9PHAE)

HSP 1 Score: 133 bits (334), Expect = 1.770e-32
Identity = 94/231 (40.69%), Postives = 120/231 (51.95%), Query Frame = 0
Query:    2 KDQLQVLFEGIAREDRMVPT-----VQHRFNSVDDVIQHLTLVVWADTRPRLVVLDDVWEREVVDTLQPTGLQLLVDTRRSSVVAAGGGRTDVGGMERAQAHELLKKKSCAVALP----ETEAGQVAEACGWHALTLAIAGTLRSVTSSPNSAPTWQALHSEI--VRKKATARGPRMETDVGDDPTKLLLLPVLDLSLDSLGKDEQHLFLGLVVLARGVLAPVPMLASIWQ 221
            K+ L  L +G+ARE    PT     V H   S++ V QHL  V  A T PRLVVLDDVWEREVVD L   GL++LV TR  SVV   GG  ++G M   +A ELL K S  V  P     T+  +V   CG   L LAIAG++  V     +A  W+ L  E   V KK   RG +  +          +  VL  S D+L   +Q   L + VLA G LAP+ ML ++W+
Sbjct:   79 KNSLLSLLQGLAREMSAAPTDTPHGVPHVLESLEQVKQHLATVASAGTSPRLVVLDDVWEREVVDALLSLGLKVLVTTRDRSVVGVSGGLLELGDMTEEEALELLLKTSRTVGQPGHEVRTQMTKVVVLCGHLPLVLAIAGSMSVVKGKGLTAVAWEELIKEFENVAKKMRVRGEQSSS----------IKVVLGTSFDALAARKQEESLKMTVLAAGALAPIEMLRNLWE 299          
BLAST of mRNA_C-linearis_contig10.555.1 vs. uniprot
Match: D7G722_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G722_ECTSI)

HSP 1 Score: 133 bits (334), Expect = 4.910e-32
Identity = 91/231 (39.39%), Postives = 121/231 (52.38%), Query Frame = 0
Query:    2 KDQLQVLFEGIAREDRMVPT-----VQHRFNSVDDVIQHLTLVVWADTRPRLVVLDDVWEREVVDTLQPTGLQLLVDTRRSSVVAAGGGRTDVGGMERAQAHELLKKKSCAVALP----ETEAGQVAEACGWHALTLAIAGTLRSVTSSPNSAPTWQALHSEI--VRKKATARGPRMETDVGDDPTKLLLLPVLDLSLDSLGKDEQHLFLGLVVLARGVLAPVPMLASIWQ 221
            K  L  L +G+A +    PT     V H  + ++ V QHL  V    T PRLVVLDDVWEREVVD   P G ++L+ TR  SVV    GR ++G M   +A ELL+K S  V  P     T+  +V   CG   L LAIAG++  V     +A  W+ L  E+  V KK  ARG +  +          +  VL+ S DSL   +Q  FL + VLA G LAP+ ML ++W+
Sbjct:  338 KSSLLALLQGLAWDVGAAPTDAPHGVPHVLDRLEQVQQHLAAVASTGTSPRLVVLDDVWEREVVDAFVPLGFKVLLTTRDRSVVGLPAGRLELGDMTEEEALELLRKTSGTVGQPGDDVRTKMTKVVALCGHLPLVLAIAGSMSVVRGKGLTAVAWEELAKELENVAKKMRARGEQSSS----------MKVVLETSFDSLAVRKQEEFLKMAVLAAGALAPIEMLRNLWE 558          
BLAST of mRNA_C-linearis_contig10.555.1 vs. uniprot
Match: D7G720_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G720_ECTSI)

HSP 1 Score: 132 bits (332), Expect = 9.310e-32
Identity = 91/231 (39.39%), Postives = 122/231 (52.81%), Query Frame = 0
Query:    2 KDQLQVLFEGIAREDRMVPT-----VQHRFNSVDDVIQHLTLVVWADTRPRLVVLDDVWEREVVDTLQPTGLQLLVDTRRSSVVAAGGGRTDVGGMERAQAHELLKKKSCAVALP----ETEAGQVAEACGWHALTLAIAGTLRSVTSSPNSAPTWQALHSEI--VRKKATARGPRMETDVGDDPTKLLLLPVLDLSLDSLGKDEQHLFLGLVVLARGVLAPVPMLASIWQ 221
            K  L  L +G+AR+    PT     V    +S++ V QHL  V    T  RLVVLDDVWEREVVD   P G ++L+ TR  SVV    GR ++G +   +A ELL+K S AV  P     T+  +V   CG   L LAIAG++  V     +A  W+ L  E+  V KK  ARG +  +          +  VL+ S DSL   +Q  FL + VLA G LAP+ ML ++W+
Sbjct:  321 KSSLLALLQGLARDVGAAPTDAPCGVPRVLDSLEQVRQHLAAVTSTGTSQRLVVLDDVWEREVVDAFVPLGFKVLLTTRDRSVVGVPAGRLELGDVTEEEALELLRKTSGAVGQPGDDVRTKMTKVVALCGHLPLVLAIAGSMSVVRGKGLTAVAWEELAKELENVAKKMRARGEQSSS----------MKVVLETSFDSLAVRKQEEFLKMAVLAAGALAPIEMLRNLWE 541          
BLAST of mRNA_C-linearis_contig10.555.1 vs. uniprot
Match: D7FUD7_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUD7_ECTSI)

HSP 1 Score: 131 bits (330), Expect = 1.700e-31
Identity = 90/230 (39.13%), Postives = 123/230 (53.48%), Query Frame = 0
Query:    2 KDQLQVLFEGIAREDRMVPT-----VQHRFNSVDDVIQHLTLVVWADTRPRLVVLDDVWEREVVDTLQPTGLQLLVDTRRSSVVAAGGGRTDVGGMERAQAHELLKKKSCAVALPET---EAGQVAEACGWHALTLAIAGTLRSVTSSPNSAPTWQALHSEI--VRKKATARGPRMETDVGDDPTKLLLLPVLDLSLDSLGKDEQHLFLGLVVLARGVLAPVPMLASIWQ 221
            K+ L  L +G+ARE    PT     V H  +S++ V QHL  V      PRLVVLDDVWEREVVD   P G +LL+ TR  S+V    GR ++G M   +A ELL+K S  V   +    +  +V   CG   L LAIAG++ +V     +A  W+ L  E   V KK  ARG +  +          +  VL+ + DSL   +Q  FL + VLA G LAP+ ML+++W+
Sbjct:  123 KNSLLPLLQGLAREVGAAPTDAPHGVPHALDSLEQVQQHLAAVASTRNSPRLVVLDDVWEREVVDAFVPLGFKLLLTTRDRSIVCDPAGRLELGDMTEEEALELLRKTSGTVDPGDDVRMKMTKVVALCGHLPLVLAIAGSMSAVKGKGLTAVAWEELAKEFENVAKKMRARGQQSSS----------IKVVLETTFDSLATRKQKEFLMMAVLAAGALAPIEMLSNLWE 342          
BLAST of mRNA_C-linearis_contig10.555.1 vs. uniprot
Match: D8LGG5_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGG5_ECTSI)

HSP 1 Score: 130 bits (326), Expect = 6.100e-31
Identity = 94/232 (40.52%), Postives = 124/232 (53.45%), Query Frame = 0
Query:    2 KDQLQVLFEGIAREDRMVPT-----VQHRFNSVDDVIQHLTLVVWAD-TRPRLVVLDDVWEREVVDTLQPTGLQLLVDTRRSSVVAAGGGRTDVGGMERAQAHELLKKKSCAVALP----ETEAGQVAEACGWHALTLAIAGTLRSVTSSPNSAPTWQALHS--EIVRKKATARGPRMETDVGDDPTKLLLLPVLDLSLDSLGKDEQHLFLGLVVLARGVLAPVPMLASIWQ 221
            K+ L  L +G+ARE  + PT     V    +S++ V QHL  VV +  T PRLVVLDDVWEREVVD L P G ++L+ TR  SVV     R D+G M   +A ELL+K S  V  P      +  +V   CG   L LAIAG++ +V     +A  W+ L    E V KK  ARG +             +  VL+ S DSL   +Q  FL + VLA G LAP+ ML ++W+
Sbjct:  295 KNSLLPLLQGLAREMGVAPTDAPHAVPQVLDSLEQVQQHLAAVVASTGTSPRLVVLDDVWEREVVDALVPLGFKVLLTTRDWSVVVVPARRLDLGDMTEEEALELLRKTSGTVGQPGDYVRMKMTKVVALCGHLPLVLAIAGSMSAVKGKGLTAVAWEELAKSFENVAKKMRARGQQSSA----------IKVVLETSFDSLAVQKQEEFLRMSVLAAGALAPIEMLRNLWE 516          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig10.555.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 24
Match NameE-valueIdentityDescription
A0A6H5JJK0_9PHAE6.470e-7962.61Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JSG2_9PHAE1.180e-5050.22AAA domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7G7W8_ECTSI3.970e-5050.22NB-ARC and TPR repeat-containig protein n=1 Tax=Ec... [more]
A0A6H5J6Q8_9PHAE2.130e-4949.33NB-ARC domain-containing protein n=1 Tax=Ectocarpu... [more]
A0A6H5KK53_9PHAE8.730e-3562.71NB-ARC domain-containing protein n=1 Tax=Ectocarpu... [more]
A0A6H5LJA6_9PHAE1.770e-3240.69NB-ARC domain-containing protein n=1 Tax=Ectocarpu... [more]
D7G722_ECTSI4.910e-3239.39NB-ARC and TPR repeat-containing protein n=1 Tax=E... [more]
D7G720_ECTSI9.310e-3239.39NB-ARC and TPR repeat-containing protein n=1 Tax=E... [more]
D7FUD7_ECTSI1.700e-3139.13NB-ARC and TPR repeat-containing protein n=1 Tax=E... [more]
D8LGG5_ECTSI6.100e-3140.52NB-ARC and TPR repeat-containing protein n=1 Tax=E... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002182NB-ARCPFAMPF00931NB-ARCcoord: 43..159
e-value: 1.4E-5
score: 24.4
NoneNo IPR availableGENE3D3.40.50.300coord: 1..87
e-value: 6.2E-7
score: 31.1
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 198..220
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 221..225
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..197
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 23..200

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig10contigC-linearis_contig10:2372122..2372897 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig10.555.1mRNA_C-linearis_contig10.555.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig10 2372122..2372897 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig10.555.1 ID=prot_C-linearis_contig10.555.1|Name=mRNA_C-linearis_contig10.555.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=226bp
GKDQLQVLFEGIAREDRMVPTVQHRFNSVDDVIQHLTLVVWADTRPRLVV
LDDVWEREVVDTLQPTGLQLLVDTRRSSVVAAGGGRTDVGGMERAQAHEL
LKKKSCAVALPETEAGQVAEACGWHALTLAIAGTLRSVTSSPNSAPTWQA
LHSEIVRKKATARGPRMETDVGDDPTKLLLLPVLDLSLDSLGKDEQHLFL
GLVVLARGVLAPVPMLASIWQNVFV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002182NB-ARC
IPR027417P-loop_NTPase