prot_C-linearis_contig10.545.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig10.545.1
Unique Nameprot_C-linearis_contig10.545.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length146
Homology
BLAST of mRNA_C-linearis_contig10.545.1 vs. uniprot
Match: A0A6H5L8M0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L8M0_9PHAE)

HSP 1 Score: 204 bits (519), Expect = 3.950e-60
Identity = 105/135 (77.78%), Postives = 117/135 (86.67%), Query Frame = 0
Query:    1 MCSRNECRRVESLRSAATGDTASALPSHCAHAEVVTEADRTSQ-MPKADALFSGGGVTSALAKVPAGTFNPPTAAAMRARADQAAKEGVPLLVRAGNTKYFAVRDGQKFNRTVIGEWGHMKYEKGGNKMFQCKLA 134
            +CSR +CRR+E L SAATGDTASALPS CAHAEVV EA+RTS  MPKADAL S G   SAL KVPAGTFNP T A+MRARADQAAKEG+PLLVR GNTKYFAVRDGQKFNRTVIGEWGH+KY++ G+K+FQCK +
Sbjct:  401 LCSRPDCRRIEGLSSAATGDTASALPSRCAHAEVVIEAERTSMPMPKADALLSAGDFKSALDKVPAGTFNPRTVASMRARADQAAKEGLPLLVRVGNTKYFAVRDGQKFNRTVIGEWGHVKYDQRGSKVFQCKAS 535          
BLAST of mRNA_C-linearis_contig10.545.1 vs. uniprot
Match: A0A6H5L6Z2_9PHAE (CxC4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6Z2_9PHAE)

HSP 1 Score: 200 bits (508), Expect = 8.860e-58
Identity = 103/135 (76.30%), Postives = 116/135 (85.93%), Query Frame = 0
Query:    1 MCSRNECRRVESLRSAATGDTASALPSHCAHAEVVTEADRTSQ-MPKADALFSGGGVTSALAKVPAGTFNPPTAAAMRARADQAAKEGVPLLVRAGNTKYFAVRDGQKFNRTVIGEWGHMKYEKGGNKMFQCKLA 134
            +CSR +CRR+E L SAATGDTASALPS CAHAEVV EA++TS  MPKADAL S G   SAL KVPAGTFN  T A+MRARADQAAKEG+PLLVR GNTKYFAVRDGQKFNRTVIGEWGH+KY++ G+K+FQCK +
Sbjct:  317 LCSRPDCRRIEGLSSAATGDTASALPSRCAHAEVVIEAEKTSMPMPKADALLSAGDFESALDKVPAGTFNQRTVASMRARADQAAKEGLPLLVRVGNTKYFAVRDGQKFNRTVIGEWGHVKYDQRGSKVFQCKAS 451          
BLAST of mRNA_C-linearis_contig10.545.1 vs. uniprot
Match: A0A6H5KZ13_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZ13_9PHAE)

HSP 1 Score: 146 bits (369), Expect = 4.790e-41
Identity = 72/91 (79.12%), Postives = 80/91 (87.91%), Query Frame = 0
Query:   44 MPKADALFSGGGVTSALAKVPAGTFNPPTAAAMRARADQAAKEGVPLLVRAGNTKYFAVRDGQKFNRTVIGEWGHMKYEKGGNKMFQCKLA 134
            MPKADAL S G   SAL KVPAGTFNP T A+MRARADQAAKEG+PLLVR GNTKYFAVRDGQKFNRTVIGEWGH+KY++ G+K+FQCK +
Sbjct:    3 MPKADALLSAGDFKSALDKVPAGTFNPRTVASMRARADQAAKEGLPLLVRVGNTKYFAVRDGQKFNRTVIGEWGHVKYDQRGSKVFQCKAS 93          
BLAST of mRNA_C-linearis_contig10.545.1 vs. uniprot
Match: A0A6H5JH13_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JH13_9PHAE)

HSP 1 Score: 149 bits (375), Expect = 7.290e-39
Identity = 82/137 (59.85%), Postives = 101/137 (73.72%), Query Frame = 0
Query:    1 MCSRNECRRVESLRS--AATGDTASALPSHCAHAEVVTEADRTSQ-MPKADALFSGGGVTSALAKVPAGTFNPPTAAAMRARADQAAKEGVPLLVRAGNTKYFAVRDGQKFNRTVIGEWGHMKYE-KGGNKMFQCKL 133
            MCSR+ECRRV ++++  AA G T S LP+ C HAEVV EA+R+S  MPKAD LFS G    AL  VP GTFN  T  AM  RADQAA+ GVP+LV  G+T+ F ++DG + NRTVIGEW H+KY+ KGG+KMFQCK+
Sbjct:  646 MCSRDECRRVGNVQTSAAAAGVTGSPLPARCPHAEVVLEAERSSTPMPKADPLFSAGEFREALTTVPPGTFNKSTTRAMHTRADQAAQAGVPVLVGLGSTRCFEIKDGHENNRTVIGEWAHVKYDDKGGSKMFQCKV 782          
BLAST of mRNA_C-linearis_contig10.545.1 vs. uniprot
Match: A0A6H5KLI9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLI9_9PHAE)

HSP 1 Score: 133 bits (334), Expect = 2.570e-37
Identity = 73/120 (60.83%), Postives = 86/120 (71.67%), Query Frame = 0
Query:   16 AATGDTASALPSHCAHAEVVTEADRTSQ-MPKADALFSGGGVTSALAKVPAGTFNPPTAAAMRARADQAAKEGVPLLVRAGNTKYFAVRDGQKFNRTVIGEWGHMKYE-KGGNKMFQCKL 133
            AATG T S LP+ C   EVV E +R+S  MPKAD LFS G    AL  VP GTFN  T  AM  RADQAAKEGVP+LV  G+T+ F ++DG + NRTVIGEW H+KY+ KGG+KMFQCK+
Sbjct:   10 AATGVTGSPLPARCPPVEVVLEVERSSTPMPKADPLFSAGEFREALTTVPPGTFNESTTRAMHTRADQAAKEGVPVLVGLGSTRCFGIKDGHENNRTVIGEWAHVKYDDKGGSKMFQCKV 129          
BLAST of mRNA_C-linearis_contig10.545.1 vs. uniprot
Match: D7FN79_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FN79_ECTSI)

HSP 1 Score: 130 bits (328), Expect = 6.180e-33
Identity = 75/139 (53.96%), Postives = 99/139 (71.22%), Query Frame = 0
Query:    1 MCSRNECRRVESLRS--AATGDTASALPSHCAHAEVVTEADRTSQ-MPKADALFSGGGVTSALAK-VPAGTFNPPTAAAMRARADQAAKEGVPLLVRAGNTKYFAVRDGQKFNRTVIGEWGHMKYE-KGGNKMFQCKLA 134
            +CSR +CRRV++ ++  AATG T SALP+ C HAEVV +A+R+S  MP AD LFS      AL   VPAG F+  T  AM ARADQAA++GVP+LV  G+TKYF + DG + NR V+G W H+KY+ + G+K+FQCK+ 
Sbjct:  370 ICSRKDCRRVKNPQTSAAATGGTDSALPAPCCHAEVVLQAERSSMPMPTADPLFSAEEFRHALTTAVPAGAFSEGTTRAMHARADQAAEDGVPVLVGLGSTKYFGITDGLQNNRKVVGGWAHVKYDDRDGSKIFQCKVG 508          
BLAST of mRNA_C-linearis_contig10.545.1 vs. uniprot
Match: A0A6H5KVV8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVV8_9PHAE)

HSP 1 Score: 113 bits (282), Expect = 5.120e-28
Identity = 67/140 (47.86%), Postives = 90/140 (64.29%), Query Frame = 0
Query:    1 MCSRNECRRVESL--RSAATGDTASALPSHCAHAEVVTEADRTSQMPKADA---LFSGGGVTSALAKVPAGTFNPPTAAAMRARADQAAKEGVPLLVRAGNTKYFAVRDGQKFNRTVIGEWGHMKYEKGGNKM-FQCKLA 134
            MCSR EC+ +E+L  ++AA GDT   L  HCAHA+VV +A + S +P A A   L S      AL  VP GTFN  T  A+RAR  +A + G+P+LV+ G+TK+FAVRDG  FNR ++G W H+K E+ G K   +CK+ 
Sbjct:  107 MCSRPECKTIETLSAKAAAGGDTECVLRRHCAHADVVVQA-KASSVPMAGATALLPSAEEFLRALDAVPTGTFNKHTMQAIRARVARAEELGIPVLVKLGDTKFFAVRDGPNFNRNIVGGWAHVKCEESGGKTTLRCKVG 245          
BLAST of mRNA_C-linearis_contig10.545.1 vs. uniprot
Match: A0A6H5KAW8_9PHAE (CxC4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAW8_9PHAE)

HSP 1 Score: 105 bits (261), Expect = 1.760e-23
Identity = 62/115 (53.91%), Postives = 76/115 (66.09%), Query Frame = 0
Query:    1 MCSRNECRRVESLRSAATGDTASALPSHCAHAEVVTEADRTSQ-MPKADALFSGGGVTSALAKVPAGTFNPPTAAAMRARADQAAKEGVPLLVRAGNTKYFAVRDGQKFNRTVIG 114
            MCSRN+C        +ATG T   LP+ C HAEVV EA+ +S  MPKAD +FS      AL  VP GTFN  T  AM  RADQAA+EGVP+LV  G+T+YF ++DG + +RTVIG
Sbjct:  157 MCSRNDC--------SATGVTDPPLPARCPHAEVVLEAEGSSTPMPKADPVFSAEEFRQALTTVPPGTFNESTTRAMHTRADQAAQEGVPVLVGLGSTRYFGIKDGHENDRTVIG 263          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig10.545.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
A0A6H5L8M0_9PHAE3.950e-6077.78Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L6Z2_9PHAE8.860e-5876.30CxC4 domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A6H5KZ13_9PHAE4.790e-4179.12Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JH13_9PHAE7.290e-3959.85Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KLI9_9PHAE2.570e-3760.83Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FN79_ECTSI6.180e-3353.96Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KVV8_9PHAE5.120e-2847.86Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KAW8_9PHAE1.760e-2353.91CxC4 domain-containing protein n=1 Tax=Ectocarpus ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig10contigC-linearis_contig10:2158640..2159722 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig10.545.1mRNA_C-linearis_contig10.545.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig10 2157597..2159771 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig10.545.1 ID=prot_C-linearis_contig10.545.1|Name=mRNA_C-linearis_contig10.545.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=146bp
MCSRNECRRVESLRSAATGDTASALPSHCAHAEVVTEADRTSQMPKADAL
FSGGGVTSALAKVPAGTFNPPTAAAMRARADQAAKEGVPLLVRAGNTKYF
AVRDGQKFNRTVIGEWGHMKYEKGGNKMFQCKLAFDKGEQRQPVQ*
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