prot_C-linearis_contig10.535.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig10.535.1
Unique Nameprot_C-linearis_contig10.535.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length131
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig10.535.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 38..65
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 18..93
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..1
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..17
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 10..17
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 115..130
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 2..9
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 94..114
NoneNo IPR availableTMHMMTMhelixcoord: 92..114

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig10contigC-linearis_contig10:2025381..2025773 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig10.535.1mRNA_C-linearis_contig10.535.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig10 2025131..2025775 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig10.535.1 ID=prot_C-linearis_contig10.535.1|Name=mRNA_C-linearis_contig10.535.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=131bp
MAFLLPLLPPPARPAAAATLIVFFFSSDSSSDDDDESSEDDEELLEDDEE
LLEDDEEELSSEDDSEEEVVDSAAAAVTPPPPGFPPPPPLPGEAPAGGVA
LLLFLFLFFFLFVVDIATSSSSPPPAAPAG*
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