Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name | Value |
Hectar predicted targeting category | other localisation |
Exons | 1 |
Model size | 645 |
Cds size | 393 |
Stop | 1 |
Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
1622927325.856887-UTR-C-linearis_contig10:2025130..2025380 | 1622927325.856887-UTR-C-linearis_contig10:2025130..2025380 | Chordaria linearis ClinC8C monoicous | UTR | C-linearis_contig10 2025131..2025380 + |
1690879627.708938-UTR-C-linearis_contig10:2025130..2025380 | 1690879627.708938-UTR-C-linearis_contig10:2025130..2025380 | Chordaria linearis ClinC8C monoicous | UTR | C-linearis_contig10 2025131..2025380 + |
1622927325.880024-UTR-C-linearis_contig10:2025773..2025775 | 1622927325.880024-UTR-C-linearis_contig10:2025773..2025775 | Chordaria linearis ClinC8C monoicous | UTR | C-linearis_contig10 2025774..2025775 + |
1690879627.7344365-UTR-C-linearis_contig10:2025773..2025775 | 1690879627.7344365-UTR-C-linearis_contig10:2025773..2025775 | Chordaria linearis ClinC8C monoicous | UTR | C-linearis_contig10 2025774..2025775 + |
The following CDS feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
1622927325.8699446-CDS-C-linearis_contig10:2025380..2025773 | 1622927325.8699446-CDS-C-linearis_contig10:2025380..2025773 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig10 2025381..2025773 + |
1690879627.7233772-CDS-C-linearis_contig10:2025380..2025773 | 1690879627.7233772-CDS-C-linearis_contig10:2025380..2025773 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig10 2025381..2025773 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig10.535.1 >prot_C-linearis_contig10.535.1 ID=prot_C-linearis_contig10.535.1|Name=mRNA_C-linearis_contig10.535.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=131bp
MAFLLPLLPPPARPAAAATLIVFFFSSDSSSDDDDESSEDDEELLEDDEE LLEDDEEELSSEDDSEEEVVDSAAAAVTPPPPGFPPPPPLPGEAPAGGVA LLLFLFLFFFLFVVDIATSSSSPPPAAPAG* back to topmRNA from alignment at C-linearis_contig10:2025131..2025775+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_C-linearis_contig10.535.1 ID=mRNA_C-linearis_contig10.535.1|Name=mRNA_C-linearis_contig10.535.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=645bp|location=Sequence derived from alignment at C-linearis_contig10:2025131..2025775+ (Chordaria linearis ClinC8C monoicous) ATTGCTCTCTCCGTGCCCTTCTGCTGTTTCCGTCTGGCCGTCCGGCCCGG
CGGCGGTGTCCTTGCCGCCCCCTGTGCTGGCCGTCGCCGTCCCCAGGTTC
TTGAGCTGCCCGACGATCCGGCCCAGCGGCCCGCCCCAGGCATTCTGCCC
AGGGACGGCGGCGCTTGAGGCGGCACAGTCGCCTAGTCCTCGGCCTCTCC
CCCTGCCAGCGGGCACCAGGTCGGGCTTCTTGGCGCTGGCTACGCCGCGC
ATGGCTTTCTTGTTGCCGCTGCTGCCGCCGCCGGCCCGCCCAGCTGCTGC
CGCTACCTTGATCGTTTTTTTCTTCTCGTCGGATTCCTCGTCAGATGATG
ATGATGAGTCCTCGGAAGATGATGAGGAGCTGCTGGAAGACGACGAGGAG
CTGCTTGAGGACGACGAGGAGGAGCTCTCGTCAGAAGACGACTCCGAAGA
GGAAGTGGTAGACTCGGCGGCAGCGGCGGTAACTCCTCCGCCGCCGGGCT
TTCCACCGCCTCCGCCACTACCAGGGGAAGCGCCCGCCGGTGGCGTCGCC
TTGCTCTTGTTCTTGTTTCTCTTTTTCTTTCTCTTTGTGGTTGACATTGC
CACCTCTTCCTCCTCCCCGCCCCCCGCCGCCCCAGCCGGGTAGAC back to topCoding sequence (CDS) from alignment at C-linearis_contig10:2025131..2025775+ >mRNA_C-linearis_contig10.535.1 ID=mRNA_C-linearis_contig10.535.1|Name=mRNA_C-linearis_contig10.535.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=786bp|location=Sequence derived from alignment at C-linearis_contig10:2025131..2025775+ (Chordaria linearis ClinC8C monoicous) ATGGCTTTCTTGTTGCCGCTGCTGCCGCCGCCGGCCCGCCCAGCTGCTGC CGCTACCTTGATCGTTTTTTTCTTCTCGTCGGATTCCTCGTCAGATGATG ATGATGAGTCCTCGGAAGATGATGAGGAGCTGCTGGAAGACGACGAGGAG CTGCTTGAGGACGACGAGGAGGAGCTCTCGTCAGAAGACGACTCCGAAGA GGAAGTGGTAGACTCGGCGGCAGCGGCGGTAACTCCTCCGCCGCCGGGCT TTCCACCGCCTCCGCCACTACCAGGGGAAGCGCCCGCCGGTGGCGTCGCC TTGCTCTTGTTCTTGTTTCTCTTTTTCTTTCTCTTTGTGGTTGACATTGC CACCTCTTCCTCCTCCCCGCCCCCCGCCGCCCCAGCCGGGTAGATGGCTT TCTTGTTGCCGCTGCTGCCGCCGCCGGCCCGCCCAGCTGCTGCCGCTACC TTGATCGTTTTTTTCTTCTCGTCGGATTCCTCGTCAGATGATGATGATGA GTCCTCGGAAGATGATGAGGAGCTGCTGGAAGACGACGAGGAGCTGCTTG AGGACGACGAGGAGGAGCTCTCGTCAGAAGACGACTCCGAAGAGGAAGTG GTAGACTCGGCGGCAGCGGCGGTAACTCCTCCGCCGCCGGGCTTTCCACC GCCTCCGCCACTACCAGGGGAAGCGCCCGCCGGTGGCGTCGCCTTGCTCT TGTTCTTGTTTCTCTTTTTCTTTCTCTTTGTGGTTGACATTGCCACCTCT TCCTCCTCCCCGCCCCCCGCCGCCCCAGCCGGGTAG back to top
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