prot_C-linearis_contig10.530.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig10.530.1
Unique Nameprot_C-linearis_contig10.530.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length282
Homology
BLAST of mRNA_C-linearis_contig10.530.1 vs. uniprot
Match: D8LRE7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRE7_ECTSI)

HSP 1 Score: 187 bits (475), Expect = 4.270e-50
Identity = 103/195 (52.82%), Postives = 130/195 (66.67%), Query Frame = 0
Query:   22 PFCMTCKLSQPELVGRCDADVFFKEP-----------VALEEFQIQTPAG-MGVRMICPSCRTNEFVQPPGVSRNGY-NMFSTRIRVAHNVDGVMIPLTGKHRCKNPACALVRGSARSKAEKEEQNQGGQQVSDIVWNDAAVISRCADGVSFNTMGDSYMQLLPAEIQAMLPYRWFTQNGTSLKLLDMVRGLDGD 203
            P   T  +S+    G  D     +E            VAL   +++T  G +GVRMICPSC TNEFV+ PGVS NG+ ++ S +IRVAH++ GV++P+ GK+RCKNPACAL   SAR  AEK E+N GG + S+IVW+DAAV S C +GVSFNTM   YMQLLPA + A LPYR+F QNGTS +LLDMV   +GD
Sbjct:  222 PTAATAAMSRAATDGGADMGELLREAAMAAFATIHVAVALYVHEVKTNGGEVGVRMICPSCLTNEFVETPGVSGNGFPSVSSQKIRVAHDIHGVVVPVFGKYRCKNPACALNVRSARQSAEKAEKN-GGPKASEIVWDDAAVTSHCKNGVSFNTMDTRYMQLLPAAVVAKLPYRFFKQNGTSERLLDMVSATEGD 415          
BLAST of mRNA_C-linearis_contig10.530.1 vs. uniprot
Match: D7FLQ5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLQ5_ECTSI)

HSP 1 Score: 179 bits (453), Expect = 3.010e-47
Identity = 100/195 (51.28%), Postives = 128/195 (65.64%), Query Frame = 0
Query:   22 PFCMTCKLSQPELVGRCDADVFFKEP-----------VALEEFQIQTPAG-MGVRMICPSCRTNEFVQPPGVSRNGY-NMFSTRIRVAHNVDGVMIPLTGKHRCKNPACALVRGSARSKAEKEEQNQGGQQVSDIVWNDAAVISRCADGVSFNTMGDSYMQLLPAEIQAMLPYRWFTQNGTSLKLLDMVRGLDGD 203
            P   T  +S+    G  D     +E            VAL   +++T  G +GVRMICPSC TNEFV+ PGVS NG+ ++ S +IRVAH++ GV++ + GK+RCKNPACAL   SAR  AEK E+N GG + S+IVW+DAAV S C +GV+FNTM   YMQLLPA + A LPYR+F QN TS +LLDMV   +GD
Sbjct:  120 PTAATAAMSRAATDGGADMGELLREAAMAAFATIHVAVALYVHEVKTNGGEVGVRMICPSCLTNEFVETPGVSGNGFPSVSSQKIRVAHDIHGVVVHVFGKYRCKNPACALNVRSARKSAEKAEKN-GGPKASEIVWDDAAVTSHCKNGVAFNTMDTRYMQLLPAAVVAKLPYRFFKQNITSERLLDMVSATEGD 313          
BLAST of mRNA_C-linearis_contig10.530.1 vs. uniprot
Match: D8LRE6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRE6_ECTSI)

HSP 1 Score: 152 bits (383), Expect = 2.440e-39
Identity = 89/253 (35.18%), Postives = 142/253 (56.13%), Query Frame = 0
Query:   42 VFFKEPVALEEFQIQTPAGMGVRMICPSCRTNEFVQPPGVSRNGYNMFSTRIRVAHNVDGVMIPLTGKHRCKNPACALVRGSARSKAEKEEQNQGGQQVSDIVWNDAAVISRCADGVSFNTMGDSYMQLLPAEI-QAMLPYRWFTQNGTSLKLLDMVRGLD-----GDVQEKDNMTGGILGLHSGRIIKADTSDRVAGKNTTFSVKGLYFVLGEDGKTHRFGSIKTESM-------ERYSEPRGLKGTLLDLQ 281
            +FF+E V  + F++ T  G GVRMICP C++N+FV+PPGVS +G+     ++RVAH+V GV++P+TG++ C  P C L   SA+  A +++       V+D  W++  +   C +GVSFNTM +S  Q +  +  +   P+  +  N +S+     V  L+     G  ++K +M   +L L  G+ + AD S R+ G+        LY ++ ED K H +G++K+ES        +RY+E R   GTL  LQ
Sbjct:  167 IFFEELVRDDRFKVNTRGGAGVRMICPGCKSNKFVKPPGVSGHGFPCMGAKLRVAHDVAGVVVPVTGRYACLGPGCPLRLESAKRSAARKK-----SVVADDGWDEDTIKKHCPNGVSFNTMDESKQQEIERKAGRGPTPWPPWKFNRSSITATPSVAVLNTIYAAGHEEDKGHMHRELLSLVDGQFVNADGSYRLIGR-ANHDAHCLYSLMREDAKIHAYGALKSESKVETLPLYKRYAERRRRSGTLTTLQ 413          
BLAST of mRNA_C-linearis_contig10.530.1 vs. uniprot
Match: A0A6H5JTJ4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTJ4_9PHAE)

HSP 1 Score: 87.8 bits (216), Expect = 1.890e-16
Identity = 61/178 (34.27%), Postives = 86/178 (48.31%), Query Frame = 0
Query:   41 DVFFKEPV-----------ALEEFQIQTPAG--MGVRMICPSCRTNEFVQPPGVSRNGYNMFSTRIRVAHNVDGVMIPLTGKHRCKNPACALVRGSARSKAEKEEQNQGGQQVSDIVWNDAAVISRCADGVSFNTMGDSYMQLLPAEIQAMLPYRWFTQNGTSLKLLDMVRGLDGDVQ 205
            DV  KEP            AL   ++ T  G   GVRMICP C++N  V+P GVS + +     R + +    G +   + K   + P   +V                   V+D  W++A +   C +G S   M D+YMQLLP E  + LP+R+F+QNGTS  LLD VR  +GD+Q
Sbjct:  155 DVLLKEPAMAVFATTQVVFALHVHEVVTTPGGAKGVRMICPGCKSNSEVKPLGVSGHDFPNGGAR-KASRTFAGALS--SWKVPRRRPTKNVV-------------------VADDGWDEATIREHCPNGASCTVMDDTYMQLLPEETVSRLPFRYFSQNGTSETLLDQVRATEGDLQ 310          
BLAST of mRNA_C-linearis_contig10.530.1 vs. uniprot
Match: A0A6H5KAB7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAB7_9PHAE)

HSP 1 Score: 62.8 bits (151), Expect = 1.230e-7
Identity = 64/238 (26.89%), Postives = 99/238 (41.60%), Query Frame = 0
Query:   55 IQTPAGM-GVRMICPSCRTNEFVQPPGVSRNGYNMFSTRIRVAHNVDGVMIPLTGKHRCKNPACALVRGSARSKAEKEEQNQGGQQVSDIVWNDAAVISRCADGVSFNTMGDSYMQLLPAEIQAMLPYRWFTQNGTSLKLLDMVRGLDGDVQEKDNMTGGILGLHS---GRIIKADTSDRVAGKNTTFSVKGLYFVLGEDGKTHRFGSIKTESME-------RYSEPRGLKGTLLDLQ 281
            + TP+G  GVRMICP C++N  V+PPGVS + +                  P  G  +    A     G+  S             ++D  W++A     C +G SF TM D  + +   + + +    W  +           R L     +  + T     +HS   G+ +  D + R+ G     S   L F+LGED K H +G++++E  E       RY+E R   GTLL L+
Sbjct:  119 VTTPSGAKGVRMICPGCKSNSEVKPPGVSGHDF------------------PNAGAQK----ASRTFAGTLSSWKVPRRWPTKKVVIADDGWDEATSREHCPNGASFITMDDRIL-VAGEQGRELREIHWCIR----------FRVLSSSTGQGAHATR----IHSQCEGQFLCMDGTWRI-GLRVIDSPDCLCFLLGEDAKVHSYGAVQSERKEEIYLLLNRYAERRRRNGTLLALE 318          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig10.530.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D8LRE7_ECTSI4.270e-5052.82Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FLQ5_ECTSI3.010e-4751.28Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LRE6_ECTSI2.440e-3935.18Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JTJ4_9PHAE1.890e-1634.27Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KAB7_9PHAE1.230e-726.89Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig10contigC-linearis_contig10:1872345..1874370 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig10.530.1mRNA_C-linearis_contig10.530.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig10 1872274..1874609 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig10.530.1 ID=prot_C-linearis_contig10.530.1|Name=mRNA_C-linearis_contig10.530.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=282bp
MNAGETRVAVRNAPNSRHNWDPFCMTCKLSQPELVGRCDADVFFKEPVAL
EEFQIQTPAGMGVRMICPSCRTNEFVQPPGVSRNGYNMFSTRIRVAHNVD
GVMIPLTGKHRCKNPACALVRGSARSKAEKEEQNQGGQQVSDIVWNDAAV
ISRCADGVSFNTMGDSYMQLLPAEIQAMLPYRWFTQNGTSLKLLDMVRGL
DGDVQEKDNMTGGILGLHSGRIIKADTSDRVAGKNTTFSVKGLYFVLGED
GKTHRFGSIKTESMERYSEPRGLKGTLLDLQ*
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