prot_C-linearis_contig10.514.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig10.514.1
Unique Nameprot_C-linearis_contig10.514.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length210
Homology
BLAST of mRNA_C-linearis_contig10.514.1 vs. uniprot
Match: A0A6H5KWP7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWP7_9PHAE)

HSP 1 Score: 273 bits (699), Expect = 1.560e-90
Identity = 166/189 (87.83%), Postives = 174/189 (92.06%), Query Frame = 0
Query:   24 ARTVSG---DTQLATPAPEANIPRQGHGAFDTFRFVEELEGAGVPRDQAITMMNQVLLAISEANTRQITLVATKEDLLSLQSEINEKVFSSTLRYDLAQRHLKELMQRDLSQVKADVRSEEKFDFAKLHDEITELEKRVFQRRETDEVRXXXXXXXXXXXXXXVILQYGIGFFGSVIAMGLAVARIASL 209
            ART S    D  LATPAPEA+ PRQGHGAFDT+RFV ELE AGVP+ QA+ +M QVLLAISEANTRQI LVATK+DLLSLQSEINEKV+SSTLRYDLAQRHLKELMQRDL QVKADVRSEEKFDFAKLHDEITELEKRVFQRRETDEVRXXXXXXXXXXXXXXVILQYGIGFFGSVIAMGLAVARIA+L
Sbjct:   29 ARTFSSAPDDMLLATPAPEASNPRQGHGAFDTYRFVTELERAGVPKGQAVMIMEQVLLAISEANTRQIALVATKQDLLSLQSEINEKVYSSTLRYDLAQRHLKELMQRDLMQVKADVRSEEKFDFAKLHDEITELEKRVFQRRETDEVRXXXXXXXXXXXXXXVILQYGIGFFGSVIAMGLAVARIAAL 217          
BLAST of mRNA_C-linearis_contig10.514.1 vs. uniprot
Match: D7FZX0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZX0_ECTSI)

HSP 1 Score: 257 bits (657), Expect = 2.450e-84
Identity = 161/201 (80.10%), Postives = 168/201 (83.58%), Query Frame = 0
Query:   33 LATPAPEANIPRQGHGAFDTFRFVEELEGAGVPRDQAITMMNQVLLAISEANTRQITLVATKEDLLSLQSEINEKVFSSTLRYD------------------------LAQRHLKELMQRDLSQVKADVRSEEKFDFAKLHDEITELEKRVFQRRETDEVRXXXXXXXXXXXXXXVILQYGIGFFGSVIAMGLAVARIASL 209
            LATPAPE + PRQGHGAFDT+RFV ELE AGVP+ QA+ +M QVLLAISEANTRQI LVATK+DLLSLQSEINEKVFSSTLRYD                        LAQRHLKELMQRDL QVKADVRSEEKFDFAKLHDEITELEKRVFQRRETDEVRXXXXXXXXXXXXXXVILQYGIGFFGSVIAMGLAVARIA+L
Sbjct:    3 LATPAPETSNPRQGHGAFDTYRFVTELERAGVPKGQAVMIMEQVLLAISEANTRQIALVATKQDLLSLQSEINEKVFSSTLRYDPAAPSIQSETIRRVLVGRCGCVSDLAQRHLKELMQRDLMQVKADVRSEEKFDFAKLHDEITELEKRVFQRRETDEVRXXXXXXXXXXXXXXVILQYGIGFFGSVIAMGLAVARIAAL 203          
BLAST of mRNA_C-linearis_contig10.514.1 vs. uniprot
Match: A0A6A3YP61_9STRA (Uncharacterized protein n=4 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6A3YP61_9STRA)

HSP 1 Score: 103 bits (257), Expect = 1.260e-23
Identity = 68/199 (34.17%), Postives = 115/199 (57.79%), Query Frame = 0
Query:   14 SRTRLPVEPIARTVSGDTQLAT-----PAPEANIPRQGHGAFDTFRFVEELEGAGVPRDQAITMMNQVLLAISEANTRQITLVATKEDLLSLQSEINEKVFSSTLRYDLAQRHLKELMQRDLSQVKADVRSEEKFDFAKLHDEITELEKR-VFQRRETDEVRXXXXXXXXXXXXXXVILQYGIGFFGSVIAMGLAVARI 206
            SRT     PI R+     QLAT         +++P      FDT + V+ L+  G   DQ+  ++  +  A++++   Q  ++ATK + + L++E++E+VF+STL++D+AQRH +EL++RD + +K D+R  EK DF K+  EI ELEK+ + Q++  DE                 +LQY +GF G+++A+G A+ R+
Sbjct:   45 SRTSNQDSPILRSTLATMQLATGGRWFSTSSSDVPLH----FDTHKVVKSLQENGFSVDQSEAILQVMKDAMADSLEAQSRILATKSEHVELKAELSERVFNSTLKFDIAQRHSRELLERDFNTLKQDIRMLEKIDFDKIRMEIAELEKKFLLQKQAEDETLNELRLSMEKVEKR--MLQYAVGFAGTIMAVGAALMRL 237          
BLAST of mRNA_C-linearis_contig10.514.1 vs. uniprot
Match: A0A329SD34_9STRA (Uncharacterized protein n=1 Tax=Phytophthora cactorum TaxID=29920 RepID=A0A329SD34_9STRA)

HSP 1 Score: 103 bits (257), Expect = 1.280e-23
Identity = 58/158 (36.71%), Postives = 100/158 (63.29%), Query Frame = 0
Query:   50 FDTFRFVEELEGAGVPRDQAITMMNQVLLAISEANTRQITLVATKEDLLSLQSEINEKVFSSTLRYDLAQRHLKELMQRDLSQVKADVRSEEKFDFAKLHDEITELEKR-VFQRRETDEVRXXXXXXXXXXXXXXVILQYGIGFFGSVIAMGLAVARI 206
            FDT   V+ L+G G   DQ+  ++  +  A++++   Q  ++ATK + + L++E++E+VF+STL++D+AQRH +EL++RD + +K D+R  EK DF K+  EI ELEK+ + Q++  DE                 +LQY +GF G+++A+G A+ R+
Sbjct:   83 FDTHNVVKSLQGKGFSTDQSEAILQVMKDAMADSLEAQARILATKSEHVELKAELSERVFNSTLKFDIAQRHSRELLERDFNTLKQDIRMLEKIDFDKIRMEIAELEKKFLLQKQAEDETLNELRLSMEKVEKR--MLQYAVGFAGTIMAVGAALMRL 238          
BLAST of mRNA_C-linearis_contig10.514.1 vs. uniprot
Match: K3WEB9_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WEB9_GLOUD)

HSP 1 Score: 102 bits (253), Expect = 2.000e-23
Identity = 56/158 (35.44%), Postives = 102/158 (64.56%), Query Frame = 0
Query:   50 FDTFRFVEELEGAGVPRDQAITMMNQVLLAISEANTRQITLVATKEDLLSLQSEINEKVFSSTLRYDLAQRHLKELMQRDLSQVKADVRSEEKFDFAKLHDEITELEKR-VFQRRETDEVRXXXXXXXXXXXXXXVILQYGIGFFGSVIAMGLAVARI 206
            FDT R V+ L+  G   +Q+  +++ +  A++++   Q  ++ATK + + L++E++E+VF+STL++D+AQRH++EL++RD + +K D+R  EK DF K+  EI E+EK+ + Q++  DE                 +LQY +GF G+++A+G A+ R+
Sbjct:   43 FDTHRVVKRLQEQGFSAEQSEAILDVMKDAMADSLDAQSRILATKSEHVELKAELSERVFNSTLKFDIAQRHMRELLERDFNNLKQDIRMLEKIDFDKIRVEIAEIEKKFLLQKQAEDETLNELRLSMEKVEKR--MLQYAVGFAGTIMAVGAALMRL 198          
BLAST of mRNA_C-linearis_contig10.514.1 vs. uniprot
Match: D0NG13_PHYIT (Uncharacterized protein n=2 Tax=Phytophthora infestans TaxID=4787 RepID=D0NG13_PHYIT)

HSP 1 Score: 100 bits (250), Expect = 1.340e-22
Identity = 57/158 (36.08%), Postives = 100/158 (63.29%), Query Frame = 0
Query:   50 FDTFRFVEELEGAGVPRDQAITMMNQVLLAISEANTRQITLVATKEDLLSLQSEINEKVFSSTLRYDLAQRHLKELMQRDLSQVKADVRSEEKFDFAKLHDEITELEKR-VFQRRETDEVRXXXXXXXXXXXXXXVILQYGIGFFGSVIAMGLAVARI 206
            FDT   V+ L+  G   DQ+  +++ +  A++++   Q  ++ATK + + L++E++E+VF+STL++D+AQRH +EL++RD + +K D+R  EK DF K+  EI ELEK+ + Q++  DE                 +LQY +GF G+++A+G A+ R+
Sbjct:   82 FDTHNVVKSLQDRGFSTDQSEAILHVMKDAMADSLEAQSRILATKSEHVELKAELSERVFNSTLKFDIAQRHSRELLERDFNTLKQDIRMLEKIDFDKIRMEIAELEKKFLLQKQAEDETLNELRLSMEKVEKR--MLQYAVGFAGTIMAVGAALMRL 237          
BLAST of mRNA_C-linearis_contig10.514.1 vs. uniprot
Match: W2H4H8_PHYPR (Uncharacterized protein n=13 Tax=Phytophthora TaxID=4783 RepID=W2H4H8_PHYPR)

HSP 1 Score: 100 bits (248), Expect = 2.480e-22
Identity = 57/158 (36.08%), Postives = 99/158 (62.66%), Query Frame = 0
Query:   50 FDTFRFVEELEGAGVPRDQAITMMNQVLLAISEANTRQITLVATKEDLLSLQSEINEKVFSSTLRYDLAQRHLKELMQRDLSQVKADVRSEEKFDFAKLHDEITELEKR-VFQRRETDEVRXXXXXXXXXXXXXXVILQYGIGFFGSVIAMGLAVARI 206
            FDT   V+ L+  G   DQ+  ++  +  A++++   Q  ++ATK + + L++E++E+VF+STL++D+AQRH +EL++RD + +K D+R  EK DF K+  EI ELEK+ + Q++  DE                 +LQY +GF G+++A+G A+ R+
Sbjct:   79 FDTHNVVKSLQDKGFSPDQSEAILQVMKDAMADSLEAQSRILATKSEHVELKAELSERVFNSTLKFDIAQRHSRELLERDFNTLKQDIRMLEKIDFDKIRMEIAELEKKFLLQKQAEDETLNELRLSMEKVEKR--MLQYAVGFAGTIMAVGAALLRL 234          
BLAST of mRNA_C-linearis_contig10.514.1 vs. uniprot
Match: G4YRP2_PHYSP (Uncharacterized protein n=4 Tax=Phytophthora TaxID=4783 RepID=G4YRP2_PHYSP)

HSP 1 Score: 98.6 bits (244), Expect = 2.910e-22
Identity = 60/161 (37.27%), Postives = 100/161 (62.11%), Query Frame = 0
Query:   50 FDTFRFVEELEGAGVPRDQA---ITMMNQVLLAISEANTRQITLVATKEDLLSLQSEINEKVFSSTLRYDLAQRHLKELMQRDLSQVKADVRSEEKFDFAKLHDEITELEKR-VFQRRETDEVRXXXXXXXXXXXXXXVILQYGIGFFGSVIAMGLAVARI 206
            FDT   V+ L+  G   DQ+   + +M + + A  EA +R   ++ATK + + L++E++E+VF+STL++D+AQRH +EL++RD + +K D+R  EK DF K+  EI ELEK+ + Q++  DE                 +LQY +GF G+++A+G A+ R+
Sbjct:   27 FDTHNVVKSLQERGFTVDQSEAILQVMKEAMAASLEAQSR---ILATKSEHVELKAELSERVFNSTLKFDIAQRHSRELLERDFNTLKQDIRMLEKIDFDKIRMEIAELEKKFLLQKQAEDETLNELRLSMEKVEKR--MLQYAVGFAGTIMAVGAALLRL 182          
BLAST of mRNA_C-linearis_contig10.514.1 vs. uniprot
Match: A0A8J5ITH5_9STRA (Uncharacterized protein n=1 Tax=Phytophthora aleatoria TaxID=2496075 RepID=A0A8J5ITH5_9STRA)

HSP 1 Score: 97.8 bits (242), Expect = 5.210e-22
Identity = 57/158 (36.08%), Postives = 100/158 (63.29%), Query Frame = 0
Query:   50 FDTFRFVEELEGAGVPRDQAITMMNQVLLAISEANTRQITLVATKEDLLSLQSEINEKVFSSTLRYDLAQRHLKELMQRDLSQVKADVRSEEKFDFAKLHDEITELEKR-VFQRRETDEVRXXXXXXXXXXXXXXVILQYGIGFFGSVIAMGLAVARI 206
            FDT   V+ L+G    +DQ+  ++  +  A++++   Q  ++ATK + + L++E++E+VF+STL++D+AQRH +EL++RD + +K D+R  EK DF K+  EI ELEK+ + Q++  DE                 +LQY +GF G+++A+G A+ R+
Sbjct:   27 FDTHNVVKSLQG----KDQSEAILQVMKDAMADSLEAQARILATKSEHVELKAELSERVFNSTLKFDIAQRHSRELLERDFNTLKQDIRMLEKIDFDKIRMEIAELEKKFLLQKQAEDETLNELRLSMEKVEKR--MLQYAVGFAGTIMAVGAALMRL 178          
BLAST of mRNA_C-linearis_contig10.514.1 vs. uniprot
Match: A0A0P1ADT0_PLAHL (Uncharacterized membrane protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1ADT0_PLAHL)

HSP 1 Score: 98.6 bits (244), Expect = 5.530e-22
Identity = 56/158 (35.44%), Postives = 99/158 (62.66%), Query Frame = 0
Query:   50 FDTFRFVEELEGAGVPRDQAITMMNQVLLAISEANTRQITLVATKEDLLSLQSEINEKVFSSTLRYDLAQRHLKELMQRDLSQVKADVRSEEKFDFAKLHDEITELEKR-VFQRRETDEVRXXXXXXXXXXXXXXVILQYGIGFFGSVIAMGLAVARI 206
            FDT   V+ L+  G    Q+  +++ +  A++++   Q  ++ATK + + L++E++E+VF+STL++D+AQRH +EL++RD + +K D+R  EK DF K+  EI ELEK+ + Q++  DE                 +LQY +GF G+++A+G A+ R+
Sbjct:   54 FDTHHVVQSLQEKGFSIQQSEAILDVMKDAMADSLVAQARILATKSEHVELKAELSERVFNSTLKFDIAQRHSRELLERDFNTLKQDIRMLEKIDFDKIRMEIAELEKKFLLQKQAEDETLNELRLSMEKVEKR--MLQYAVGFAGTIMAVGAALLRL 209          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig10.514.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KWP7_9PHAE1.560e-9087.83Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FZX0_ECTSI2.450e-8480.10Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6A3YP61_9STRA1.260e-2334.17Uncharacterized protein n=4 Tax=Phytophthora fraga... [more]
A0A329SD34_9STRA1.280e-2336.71Uncharacterized protein n=1 Tax=Phytophthora cacto... [more]
K3WEB9_GLOUD2.000e-2335.44Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
D0NG13_PHYIT1.340e-2236.08Uncharacterized protein n=2 Tax=Phytophthora infes... [more]
W2H4H8_PHYPR2.480e-2236.08Uncharacterized protein n=13 Tax=Phytophthora TaxI... [more]
G4YRP2_PHYSP2.910e-2237.27Uncharacterized protein n=4 Tax=Phytophthora TaxID... [more]
A0A8J5ITH5_9STRA5.210e-2236.08Uncharacterized protein n=1 Tax=Phytophthora aleat... [more]
A0A0P1ADT0_PLAHL5.530e-2235.44Uncharacterized membrane protein n=1 Tax=Plasmopar... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR024461Coiled-coil domain-containing protein 90-likePFAMPF07798DUF1640coord: 50..206
e-value: 1.5E-6
score: 28.4
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 208..209
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 185..207
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..184
NoneNo IPR availableTMHMMTMhelixcoord: 184..206

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig10contigC-linearis_contig10:1657333..1660104 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig10.514.1mRNA_C-linearis_contig10.514.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig10 1657257..1661706 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig10.514.1 ID=prot_C-linearis_contig10.514.1|Name=mRNA_C-linearis_contig10.514.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=210bp
MQGRALVVGTRLASRTRLPVEPIARTVSGDTQLATPAPEANIPRQGHGAF
DTFRFVEELEGAGVPRDQAITMMNQVLLAISEANTRQITLVATKEDLLSL
QSEINEKVFSSTLRYDLAQRHLKELMQRDLSQVKADVRSEEKFDFAKLHD
EITELEKRVFQRRETDEVRFTQVHTEIAALERRVILQYGIGFFGSVIAMG
LAVARIASL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR024461DUF1640