Homology
BLAST of mRNA_C-linearis_contig10.509.1 vs. uniprot
Match:
D7FZX5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FZX5_ECTSI)
HSP 1 Score: 412 bits (1058), Expect = 2.610e-142
Identity = 215/301 (71.43%), Postives = 247/301 (82.06%), Query Frame = 0
Query: 1 MKPPQTPTRAGGQGAGRSKGPAPRTPSVNRLAVAERGVGARVERGEAAPVEAPFAQSARAWRSGGDRKIMFDNRGGAALTPEALRPMALVAILHVCSWLLLATGMFQIVVSKLGDFRFPLHWVGVLLMLLGLVTILVRVYTNRCGTKPDWAGFIAVFTGAACMASWLLADGPLYRRVKAAERCTDENVFELCGIDEVYEDEFSQENLADTNKCVCQVASGAWDLCVDFTSDCENIPGNRRYLLMSLVTLWIGLGLSFVVAVVSMRVVASTYDAGAIAEAREKERVKEKAASASAPTAP-FG 300
M+ P TPTR G +SK PRTPS NRLAVAERGVGARVERGE APV+ F QSARAWRSGGDRKIMFDNRGG ALTPEA RP ALVAI+HVC+WLL+A GMFQIV+SK DFR+PLHWVGVL++LLGLVT LVRVYTNRCGT P W+ IAV T AAC++SWLLADGPLY+ VK AE CTDENV ELCG ++V E+ E++ D N CVC+VASGAWDLCVDFTS+CENI +RR+LLMSL++LW+GLGL+F+VAVVSMRVVA+TYDA AIA+A EK+ +K K A SA AP FG
Sbjct: 1 MEAPSTPTRGNGVVQTKSKAGGPRTPSANRLAVAERGVGARVERGETAPVDPHFQQSARAWRSGGDRKIMFDNRGGHALTPEAQRPPALVAIMHVCAWLLIAAGMFQIVMSKCADFRYPLHWVGVLMVLLGLVTALVRVYTNRCGTNPKWSAGIAVATVAACLSSWLLADGPLYKEVKTAEVCTDENVRELCGYEDVDEN-LLPEDIPDLNVCVCRVASGAWDLCVDFTSNCENITSDRRFLLMSLISLWVGLGLAFIVAVVSMRVVATTYDAAAIAKAEEKKLMKAKFAKDSATAAPPFG 300
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig10.509.1 vs. uniprot
Analysis Date: 2022-09-16 (
Diamond blastp: OGS1.0 vs UniRef90 )
Total hits: 1
M K P P Q T P T R A G G Q G A G R S K G P A P R T P S V N R L A V A E R G V G A R V E R G E A A P V E A P F A Q S A R A W R S G G D R K I M F D N R G G A A L T P E A L R P M A L V A I L H V C S W L L L A T G M F Q I V V S K L G D F R F P L H W V G V L L M L L G L V T I L V R V Y T N R C G T K P D W A G F I A V F T G A A C M A S W L L A D G P L Y R R V K A A E R C T D E N V F E L C G I D E V Y E D E F S Q E N L A D T N K C V C Q V A S G A W D L C V D F T S D C E N I P G N R R Y L L M S L V T L W I G L G L S F V V A V V S M R V V A S T Y D A G A I A E A R E K E R V K E K A A S A S A P T A P F G V * 50 100 150 200 250 300 Expect = 2.61e-142 / Id = 71.43 Sequence D7FZX5_ECTSI
Match Name E-value Identity Description
D7FZX5_ECTSI 2.610e-142 71.43 Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name:
InterProScan on OGS1.0
Date Performed: 2022-09-29
M K P P Q T P T R A G G Q G A G R S K G P A P R T P S V N R L A V A E R G V G A R V E R G E A A P V E A P F A Q S A R A W R S G G D R K I M F D N R G G A A L T P E A L R P M A L V A I L H V C S W L L L A T G M F Q I V V S K L G D F R F P L H W V G V L L M L L G L V T I L V R V Y T N R C G T K P D W A G F I A V F T G A A C M A S W L L A D G P L Y R R V K A A E R C T D E N V F E L C G I D E V Y E D E F S Q E N L A D T N K C V C Q V A S G A W D L C V D F T S D C E N I P G N R R Y L L M S L V T L W I G L G L S F V V A V V S M R V V A S T Y D A G A I A E A R E K E R V K E K A A S A S A P T A P F G V * 50 100 150 200 250 300 Score = Score = Score = Score = Score = Score = Score = Score = Score = Score = Score = Score = Score = Sequence TRANSMEMBRANE NON_CYTOPLASMIC_DOMAIN CYTOPLASMIC_DOMAIN TRANSMEMBRANE CYTOPLASMIC_DOMAIN TRANSMEMBRANE CYTOPLASMIC_DOMAIN TRANSMEMBRANE NON_CYTOPLASMIC_DOMAIN TMhelix TMhelix TMhelix TMhelix
IPR Term IPR Description Source Source Term Source Description Alignment
None No IPR available PHOBIUS TRANSMEMBRANE Transmembrane region coord: 241..262 None No IPR available PHOBIUS NON_CYTOPLASMIC_DOMAIN Non cytoplasmic domain coord: 111..121 None No IPR available PHOBIUS CYTOPLASMIC_DOMAIN Cytoplasmic domain coord: 142..149 None No IPR available PHOBIUS TRANSMEMBRANE Transmembrane region coord: 122..141 None No IPR available PHOBIUS CYTOPLASMIC_DOMAIN Cytoplasmic domain coord: 1..87 None No IPR available PHOBIUS TRANSMEMBRANE Transmembrane region coord: 150..169 None No IPR available PHOBIUS CYTOPLASMIC_DOMAIN Cytoplasmic domain coord: 263..301 None No IPR available PHOBIUS TRANSMEMBRANE Transmembrane region coord: 88..110 None No IPR available PHOBIUS NON_CYTOPLASMIC_DOMAIN Non cytoplasmic domain coord: 170..240 None No IPR available TMHMM TMhelix coord: 150..169 None No IPR available TMHMM TMhelix coord: 241..263 None No IPR available TMHMM TMhelix coord: 88..110 None No IPR available TMHMM TMhelix coord: 120..137
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence
>prot_C-linearis_contig10.509.1 ID=prot_C-linearis_contig10.509.1|Name=mRNA_C-linearis_contig10.509.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=302bp back to top