prot_C-linearis_contig10.501.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig10.501.1
Unique Nameprot_C-linearis_contig10.501.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length155
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig10.501.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019734Tetratricopeptide repeatSMARTSM00028tpr_5coord: 4..37
e-value: 12.0
score: 14.2
coord: 46..79
e-value: 11.0
score: 14.7
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 1..95
e-value: 1.2E-20
score: 75.7
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 3..75
NoneNo IPR availablePFAMPF13424TPR_12coord: 3..77
e-value: 1.3E-15
score: 57.4
NoneNo IPR availablePANTHERPTHR45783FAMILY NOT NAMEDcoord: 3..139
NoneNo IPR availablePANTHERPTHR45783:SF3KINESIN LIGHT CHAINcoord: 3..139
IPR013026Tetratricopeptide repeat-containing domainPROSITEPS50293TPR_REGIONcoord: 4..79
score: 8.722

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig10contigC-linearis_contig10:1506689..1507153 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig10.501.1mRNA_C-linearis_contig10.501.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig10 1506689..1507153 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig10.501.1 ID=prot_C-linearis_contig10.501.1|Name=mRNA_C-linearis_contig10.501.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=155bp
MKTAHTLHQLGACAQEAGKLVEAEELLRRCLSIKEAKLDPEDIGVARTVN
QLGVCVREAGRLQEAEGYFRRCLGIVESKLGLDDGKMAITVSVQRGGRQF
EWLEKAHDLLNQYLEIGEAGRGCESRGVDEDLQQLSLCLREIRKFTRHLR
YLKIW
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019734TPR_repeat
IPR011990TPR-like_helical_dom_sf
IPR013026TPR-contain_dom