Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 1 |
| Model size | 466 |
| Cds size | 465 |
| Stop | 0 |
| Start | 1 |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622927325.5517957-CDS-C-linearis_contig10:1506688..1507153 | 1622927325.5517957-CDS-C-linearis_contig10:1506688..1507153 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig10 1506689..1507153 + |
| 1690879627.5702534-CDS-C-linearis_contig10:1506688..1507153 | 1690879627.5702534-CDS-C-linearis_contig10:1506688..1507153 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig10 1506689..1507153 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig10.501.1 >prot_C-linearis_contig10.501.1 ID=prot_C-linearis_contig10.501.1|Name=mRNA_C-linearis_contig10.501.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=155bp
MKTAHTLHQLGACAQEAGKLVEAEELLRRCLSIKEAKLDPEDIGVARTVN
QLGVCVREAGRLQEAEGYFRRCLGIVESKLGLDDGKMAITVSVQRGGRQF
EWLEKAHDLLNQYLEIGEAGRGCESRGVDEDLQQLSLCLREIRKFTRHLR
YLKIW back to topmRNA from alignment at C-linearis_contig10:1506689..1507153+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_C-linearis_contig10.501.1 ID=mRNA_C-linearis_contig10.501.1|Name=mRNA_C-linearis_contig10.501.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=465bp|location=Sequence derived from alignment at C-linearis_contig10:1506689..1507153+ (Chordaria linearis ClinC8C monoicous)
ATGAAAACGGCCCACACGCTACACCAGCTGGGTGCATGCGCTCAAGAGGC
AGGGAAGCTGGTGGAGGCAGAGGAGTTGTTGAGGCGCTGTCTGTCGATTA
AGGAAGCCAAGCTGGACCCAGAGGATATAGGTGTAGCCAGGACAGTGAAC
CAGCTGGGTGTTTGCGTTCGAGAGGCAGGCCGGTTGCAGGAAGCGGAGGG
ATATTTTAGGCGCTGCCTGGGGATCGTGGAGTCGAAGCTTGGTCTAGATG
ACGGGAAGATGGCCATTACAGTAAGCGTTCAGCGGGGCGGACGGCAATTC
GAGTGGCTAGAGAAGGCGCATGATCTTTTGAACCAGTACCTAGAAATCGG
GGAAGCTGGTCGGGGCTGCGAGAGTAGGGGTGTAGACGAAGACTTGCAGC
AGCTAAGTTTGTGCCTTCGAGAGATACGCAAGTTTACCCGTCACCTCAGA
TATTTGAAAATCTGG back to topCoding sequence (CDS) from alignment at C-linearis_contig10:1506689..1507153+ >mRNA_C-linearis_contig10.501.1 ID=mRNA_C-linearis_contig10.501.1|Name=mRNA_C-linearis_contig10.501.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=930bp|location=Sequence derived from alignment at C-linearis_contig10:1506689..1507153+ (Chordaria linearis ClinC8C monoicous)
ATGAAAACGGCCCACACGCTACACCAGCTGGGTGCATGCGCTCAAGAGGC
AGGGAAGCTGGTGGAGGCAGAGGAGTTGTTGAGGCGCTGTCTGTCGATTA
AGGAAGCCAAGCTGGACCCAGAGGATATAGGTGTAGCCAGGACAGTGAAC
CAGCTGGGTGTTTGCGTTCGAGAGGCAGGCCGGTTGCAGGAAGCGGAGGG
ATATTTTAGGCGCTGCCTGGGGATCGTGGAGTCGAAGCTTGGTCTAGATG
ACGGGAAGATGGCCATTACAGTAAGCGTTCAGCGGGGCGGACGGCAATTC
GAGTGGCTAGAGAAGGCGCATGATCTTTTGAACCAGTACCTAGAAATCGG
GGAAGCTGGTCGGGGCTGCGAGAGTAGGGGTGTAGACGAAGACTTGCAGC
AGCTAAGTTTGTGCCTTCGAGAGATACGCAAGTTTACCCGTCACCTCAGA
TATTTGAAAATCTGGATGAAAACGGCCCACACGCTACACCAGCTGGGTGC
ATGCGCTCAAGAGGCAGGGAAGCTGGTGGAGGCAGAGGAGTTGTTGAGGC
GCTGTCTGTCGATTAAGGAAGCCAAGCTGGACCCAGAGGATATAGGTGTA
GCCAGGACAGTGAACCAGCTGGGTGTTTGCGTTCGAGAGGCAGGCCGGTT
GCAGGAAGCGGAGGGATATTTTAGGCGCTGCCTGGGGATCGTGGAGTCGA
AGCTTGGTCTAGATGACGGGAAGATGGCCATTACAGTAAGCGTTCAGCGG
GGCGGACGGCAATTCGAGTGGCTAGAGAAGGCGCATGATCTTTTGAACCA
GTACCTAGAAATCGGGGAAGCTGGTCGGGGCTGCGAGAGTAGGGGTGTAG
ACGAAGACTTGCAGCAGCTAAGTTTGTGCCTTCGAGAGATACGCAAGTTT
ACCCGTCACCTCAGATATTTGAAAATCTGG back to top
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