prot_C-linearis_contig10.487.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig10.487.1
Unique Nameprot_C-linearis_contig10.487.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length1297
Homology
BLAST of mRNA_C-linearis_contig10.487.1 vs. uniprot
Match: A0A6H5L446_9PHAE (UDENN domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L446_9PHAE)

HSP 1 Score: 497 bits (1279), Expect = 8.810e-153
Identity = 388/786 (49.36%), Postives = 447/786 (56.87%), Query Frame = 0
Query:  160 PGPTIASPGGPS------AEVSPRNGPGGAWEGLTLTHPLSGDEKDLAFMEFAVIGAGPSTLAGSHPLQPWGQHAEVLSRFPSAEGKGPAGARGKGDGSFVQGLGEFCFPSGARISLVRGG-AAGTLESVPEDRMHLVQFTDCENASTYGCCVTVTHVLQDPSPRLVKRLQEREKMHAAARTLQSFMRSTRSSASG-------GGSSGHLCSTPTPT-GFVGGXXXXXSRFGFQTPPPGSGSAGGPV---DPSNGQGSELSPTSFSGMINRFFSSNPGAEIDTPPFADNDGEVGRSGLPAAAAAAMASGRAY--------SPPRSASAGGERGSPVRGSGTA------VAAAAAAEKTRSPSGVSSXXXXXXXXXXXXXRRRAPSSPCPKTQISADY---PLGAGSQRARSAGYSGGXXXXSMRNGMMREKGNQGTSAGGESVPKNVPGMFSDDESESDAGRSSDTDRDDSFGRGLDNPAAAAASGHISTSSSAVETEVGGRSSGRLGAAGRFEGRDGLDGRKQYPSGRSPI-----RGSDGAGAPSTPPGVTLTSWVAGPHDAVAGAAAGEIVGGTEDGEVTTAAAAAEAEGPSWVVLVERCYVMVSCHRNHPLMFKALRAIADADRSARPGASSSPSPPHSHTVGGATSTTFGGRAGHGASLSPPRMRLGSGIXXXXXXXXXXXXXXXXX---VAXXAAEEAKDRHRRMLRDKFLHQVRTDNSCTEEGKKVSLHCPAYLRAPLEVASTALEQWSTAVLFCCVSEQATLQALDVLLLEKTLVVCG 902
            PGP  AS  G         E+SPR+     WEGLTLT PL+GDEK+L FMEFAV+G  PSTL+G+ PL+PWGQ  EVLS FP  EG   +G RGK DGSFVQGLGEFCFP GA ISLVRG    GT E+VPEDRMHL+QFTDC+NASTYGCC+TVTHVL DPSPRLV+RLQERE+MH AARTLQ F   + +  S        G S+G+ C+TPT T G  GG     SRFGFQTPP               ++ QG+  + +SFSGMINRFFS NPG   D           G SG+ AA  AA+A G           SPPRS          VRG  T+      VAA A +    SP    +  XXX        R+RAPSSPCP+T  S +Y   P G  S R+RSAG+  GXXXX    G  R  G         +V KNVPGMFSDDESESDAG SS TD  DS G G            +S S S V          R G +G   G         Y  G  P      R S     P TPPGVTL +    P    A AA   ++GG   G      A+A     SW V VE+ YVMVS HRNHPLMFK L+AIADA+RSARPGA+ S S   S +                ASLSPPR+  G  +                    VA  AAE+AK+RHRRM+RDKFL QVRTD  C EEGKKVSL+CPA+LRAPLE+   +LE WSTAVLF CVSE+  L+ALD+LLLEKTLVVCG
Sbjct:    3 PGPANASIDGTKNDPENGPEISPRH----RWEGLTLTPPLTGDEKNLTFMEFAVVGVSPSTLSGTQPLEPWGQAPEVLSGFPVTEGDDASG-RGKRDGSFVQGLGEFCFPCGANISLVRGREGTGTREAVPEDRMHLLQFTDCDNASTYGCCLTVTHVLHDPSPRLVQRLQERERMHQAARTLQRFFTLSAACLSTDEGHHWRGDSTGYGCATPTRTPGEEGGSF---SRFGFQTPPXXXXXXXXXXXXXSAASEQGNSPA-SSFSGMINRFFS-NPGVVAD-----------GGSGV-AAVGAAVADGGGTGPGDDSDKSPPRS----------VRGERTSLRKKRPVAAVAVSPSRPSPP---ASPXXXAALSSSRLRQRAPSSPCPRTSPSGEYCHHPTGM-SGRSRSAGH--GXXXXGNVAGRERSDG---------TVKKNVPGMFSDDESESDAGYSS-TDGGDSLGGGSFEA--------VSFSGSQVANGT------RRGQSGGVRG---------YAKGSCPEMPGAERSSGTPMTPRTPPGVTLRNRTVNPRTVAAAAA---VIGGATKGR----RASAGRGRLSWSVQVEKGYVMVSSHRNHPLMFKVLKAIADAERSARPGANPSSS---SLSPXXXXXXXXXXXXXVIASLSPPRLPSGGVVGVNKSGGGKEKSPSASRFRSVAAAAAEQAKERHRRMVRDKFLQQVRTDKRCIEEGKKVSLYCPAFLRAPLELTPPSLELWSTAVLFGCVSERTILRALDLLLLEKTLVVCG 707          
BLAST of mRNA_C-linearis_contig10.487.1 vs. uniprot
Match: A0A4D9CNF6_9STRA (UDENN domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CNF6_9STRA)

HSP 1 Score: 83.2 bits (204), Expect = 2.510e-12
Identity = 51/143 (35.66%), Postives = 68/143 (47.55%), Query Frame = 0
Query:  202 FMEFAVIGAGPSTLAGSHPLQPWGQHAE----VLSRFPSAEGKGPAGARGKGDGSFVQGLGEFCFPSGARISLVRGGAAGTLESVPEDRMHLVQFTDCENASTYGCCVTVTHVLQDPSPRLVKRLQEREKMHAAARTLQSFMR 340
            F EFA++G   S L G     P  Q  E    V+   P  E K    +R          + EFCFP G R+ L              D+ H++QFTD + A++YG C+T+     D  P L+K LQ   + HAAARTLQ F+R
Sbjct:   61 FSEFAIVGIQESILRGEVSPAPCMQPVEAMEVVMGESPEEEAKPRELSR----------ISEFCFPQGGRLDLAPATQINVWTGTHRDQTHVLQFTDEQGATSYGVCLTIYEARVDCPPSLIKALQAVRRKHAAARTLQYFVR 193          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig10.487.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5L446_9PHAE8.810e-15349.36UDENN domain-containing protein n=2 Tax=Ectocarpus... [more]
A0A4D9CNF6_9STRA2.510e-1235.66UDENN domain-containing protein n=2 Tax=Monodopsid... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 29..56

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig10contigC-linearis_contig10:1227542..1241017 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig10.487.1mRNA_C-linearis_contig10.487.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig10 1225850..1241227 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig10.487.1 ID=prot_C-linearis_contig10.487.1|Name=mRNA_C-linearis_contig10.487.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=1297bp
MALSSDPATLEDQYGLPEDLSSEEAGMYINGLTQTCAALRCRIAELENDN
RNLRGTRKNLDPAQGPAAAAAAAAGKVAGVYGGGGVRGVAGEDAIMQGMM
ALVSPPAGVVAERGRGGTGGSVARREGGFKGGGRVSSIPNRARYSVGASR
FSLPSNLSPPGPTIASPGGPSAEVSPRNGPGGAWEGLTLTHPLSGDEKDL
AFMEFAVIGAGPSTLAGSHPLQPWGQHAEVLSRFPSAEGKGPAGARGKGD
GSFVQGLGEFCFPSGARISLVRGGAAGTLESVPEDRMHLVQFTDCENAST
YGCCVTVTHVLQDPSPRLVKRLQEREKMHAAARTLQSFMRSTRSSASGGG
SSGHLCSTPTPTGFVGGGGGGSSRFGFQTPPPGSGSAGGPVDPSNGQGSE
LSPTSFSGMINRFFSSNPGAEIDTPPFADNDGEVGRSGLPAAAAAAMASG
RAYSPPRSASAGGERGSPVRGSGTAVAAAAAAEKTRSPSGVSSRSPPPVS
AVSSPPRRRAPSSPCPKTQISADYPLGAGSQRARSAGYSGGGGGGSMRNG
MMREKGNQGTSAGGESVPKNVPGMFSDDESESDAGRSSDTDRDDSFGRGL
DNPAAAAASGHISTSSSAVETEVGGRSSGRLGAAGRFEGRDGLDGRKQYP
SGRSPIRGSDGAGAPSTPPGVTLTSWVAGPHDAVAGAAAGEIVGGTEDGE
VTTAAAAAEAEGPSWVVLVERCYVMVSCHRNHPLMFKALRAIADADRSAR
PGASSSPSPPHSHTVGGATSTTFGGRAGHGASLSPPRMRLGSGIGGGGRK
GRSRSVGRFRFVAAAAAEEAKDRHRRMLRDKFLHQVRTDNSCTEEGKKVS
LHCPAYLRAPLEVASTALEQWSTAVLFCCVSEQATLQALDVLLLEKTLVV
CGIYGSYGSSVPARPFQVGRRVRARGAADADGRVGQSRAGPGRGAGAVRP
SQLRLGRGERARSRRQAILGPAVHGGDGREAARCGRRRERAQEGKHLEGQ
QGPRRRNLGRTLTSQQEVGQRRRRQQKPRSAQRFLYKQLAGRRQGPPRKD
GRGVVVVVIIHGPPVSLRLPGEHLHGRSYTRGEGHRGSAAVFGEGARVFP
LRGPRRERDVEEVRRLQLDNEKLRLPPGLVHGAPRGAPEVPSGRCAHADV
RLLRGALPAKGFQDDRGKPRRRRPRAWPRPTAARRAQRGQQQQRQQGGIG
VAAPSPSFVREAFPGPLRRGRAARFCVGEGQGPRGRREAAGSPPPLPNRG
RVWRLLLMSASAAVCWPGWLCGVVSSKACLDQVAGAERERGLASCR*
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