Homology
BLAST of mRNA_C-linearis_contig10.463.1 vs. uniprot
Match:
A0A6H5JBH3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBH3_9PHAE)
HSP 1 Score: 93.6 bits (231), Expect = 3.720e-18
Identity = 52/155 (33.55%), Postives = 84/155 (54.19%), Query Frame = 0
Query: 13 CLDALAITLNAAVERGLWYSSTSTKELQMVCLDLCVACRSSWNISTMHVVVTATTSRHLWLHGGQDDDGKKRHDA-LRVPRLPVRAVTVSKWPKRVLPCPPNRERPLSHIRR------VLRRGSNRLGWGPRWWPETLEEVRFGDEFNRPVNDLV 160
CL+ALA+ + ++G+W++ST T L+ VCLD+ ++CR+ HV VT T R LWL G +D + R+P VR V++ ++P +VL P ERP + + V + + WWP+++EE+RFG FN P++ +
Sbjct: 8 CLEALAVAIRNTSDKGVWFASTRT--LKTVCLDIYLSCRNRATARACHVEVTVDTPRRLWLRGEEDALSLNSNGPPSRIPPPAVRVVSLEEYPAQVLARAPKEERPTTTLDASGLPADVGQVALDEPKQSREWWPDSVEELRFGSRFNHPLDSSI 160
BLAST of mRNA_C-linearis_contig10.463.1 vs. uniprot
Match:
A0A6H5KPY7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPY7_9PHAE)
HSP 1 Score: 61.6 bits (148), Expect = 3.810e-7
Identity = 53/177 (29.94%), Postives = 70/177 (39.55%), Query Frame = 0
Query: 13 CLDALAITLNAAVERGLWYSSTSTKELQMVCLDLCVACRSSWNISTMHVVVTATTSRHLWLHGGQDDDGKKRHDALRVPRLPVRAVTVSK---------------------------------WPKRVLPCPPNRERPLSHIRRVLRRGSNRLGWGPRWWPETLEEVRFGDEFNRPV 156
CL L + LN + WY TSTKELQ+ L+LC+ACR + T+H+ V A T R L KR RVPRL R T + WP+R+ + PL NRL G W P +L +V G +FN+P+
Sbjct: 136 CLKTLTVALNETCDGKSWY--TSTKELQLASLELCMACR---HYQTLHLTVDAHTPRRLLAAADAPSPHPKRLCGTRVPRLRARRATWNVPTASGMRTSIFATMDVDYLEFGQAFHGSLDAIVWPRRLKTIEFRQSSPL-----------NRLLDGVSW-PASLRKVCLGHDFNQPI 295
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig10.463.1 vs. uniprot
Analysis Date: 2022-09-16 (
Diamond blastp: OGS1.0 vs UniRef90 )
Total hits: 2
M V Q T T K R A G G I A C L D A L A I T L N A A V E R G L W Y S S T S T K E L Q M V C L D L C V A C R S S W N I S T M H V V V T A T T S R H L W L H G G Q D D D G K K R H D A L R V P R L P V R A V T V S K W P K R V L P C P P N R E R P L S H I R R V L R R G S N R L G W G P R W W P E T L E E V R F G D E F N R P V N D L V W P A S L Q Q L S F G Y L F N Q P I A G V V W P A S L Q Q L S F G H S F N Q Y F T G V K W P A S L Q P L S F G R G F N Q H I A R V A W P A S L Q L L S F D N S F N Q P V N D V M W L T S L Q T L S L R H R F N R P L Q E * 20 40 60 80 100 120 140 160 180 200 220 240 260 Expect = 3.72e-18 / Id = 33.55 Expect = 3.81e-7 / Id = 29.94 Sequence A0A6H5JBH3_9PHAE A0A6H5KPY7_9PHAE back to top
InterPro
Analysis Name:
InterProScan on OGS1.0
Date Performed: 2022-09-29
M V Q T T K R A G G I A C L D A L A I T L N A A V E R G L W Y S S T S T K E L Q M V C L D L C V A C R S S W N I S T M H V V V T A T T S R H L W L H G G Q D D D G K K R H D A L R V P R L P V R A V T V S K W P K R V L P C P P N R E R P L S H I R R V L R R G S N R L G W G P R W W P E T L E E V R F G D E F N R P V N D L V W P A S L Q Q L S F G Y L F N Q P I A G V V W P A S L Q Q L S F G H S F N Q Y F T G V K W P A S L Q P L S F G R G F N Q H I A R V A W P A S L Q L L S F D N S F N Q P V N D V M W L T S L Q T L S L R H R F N R P L Q E * 20 40 60 80 100 120 140 160 180 200 220 240 260 Expect = 2.1E-4 / Score = 21.4 Score = Sequence PF05725 PTHR32134
IPR Term IPR Description Source Source Term Source Description Alignment
IPR008615 FNIP PFAM PF05725 FNIP coord: 174..215 None No IPR available PANTHER PTHR32134 UNCHARACTERIZED coord: 139..266
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence
>prot_C-linearis_contig10.463.1 ID=prot_C-linearis_contig10.463.1|Name=mRNA_C-linearis_contig10.463.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=269bp back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
Term Definition
IPR008615 FNIP