mRNA_C-linearis_contig99.17155.1 (mRNA) Chordaria linearis ClinC8C monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Homology

BLAST of mRNA_C-linearis_contig99.17155.1 vs. uniprot
Match: D7G7W0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G7W0_ECTSI)

HSP 1 Score: 535 bits (1378), Expect = 1.680e-161
Identity = 560/1608 (34.83%), Postives = 682/1608 (42.41%), Query Frame = 1

Query:    1 MDIEEIDGNSSQEDRPPXXXXXXXXXXRPKSXXXXXXXXXXTQSPAIASVASGSSTLIRFLGPAGSPSLSAWEDVNRQCPVCQQTGFSSRSLALHVNKCLDVGSNAGAGVADEAGEAAAVGAKETAKKRVGNAGGRNAATAGAARXXXXXXXXTSNASHAAGAGSLEGEGVARTTPQAVPSKSKSPTSNG--------KAAKKLKTQQDGREAASERQGPGS---------DHATDKARSGTNS-----LQPSFAGSKPAGLAQQXXXXXXXXXXXXXXXTPLRRRGLGLARPPRVHPTGSDTAPTTNAAAAVSRVPNGSDERALNEIARAQLSYVLEASVNMPASAPQAGGWLGTQLFPKPGAEDSLKDGQCADCCCDRTARGQGACLAKCGASARVWAAGRGGKKIAANENSRVRPRPASWGACPSRSSGRRGWLEIWP--GDVDGGNDDDCWGDGDGYVTLRPFPSAAEPKATPXXXXXXXXXXXXXXXXXXXXXXXXXXSSLVVQAGGGPSLSSKGQKQGSSPAPTSRADRFLQVFARLQPARSALNLHESPPPSSKEKPKAKASEARHAEVEGAGARLRSRVAGDGGVNXXXXXXXXXXXXXXXGRQDVVSPGRKDSMTASVAVEFGEGEAKAGAGGTAGSCEVRGVGILATPSPKRDALGTLTLPSAGVSDAVGQRSSANINIVPDRSR-----AASSSSSPH-----------------CNSLGTSSTSVKSNSSVNKVRRK-ESRKPPSPTPTPAMPPTYTPQVGEPRGTGCLANSPLANTKGSVKQKSLLEAAPSVPPTSTSTPHLSG-------------------------------------------AMSVENVAIGMTKRPKPASVARTELNTAARGGGEPLPRDGSSRTSGRMIGRLTGASVTAKRSSAARDSDKREETLXXXXXXXXXXXXXXXXXXXXXXXPDAKHAAPVSSRWGAPRSRGALACRASSGLLRSADHAASPSXXXXXXXXXXXXXXXXXXXXASDRFVESSVSDXXXXXXXXXXXXXXXPFQGRKADVPQKGSLTVVCDHGATLRSSWSIDDSQEVGRLLFGASLGYDAVWYLDPADEDCVGVRRYRILPHPLLAPTGGWISERGRLRDDPYTIIKAIPSPTTKSXXXXXXXXXXXXXXXXXLXXXXXXXXXXXXXPAQAPLGRRHPAA-PYQRQQQQHRRQQHGNLGNEGLPKST---PTQGSNPSTNTSXNAGRRRGRG-------SSWYPSGESHDERASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSKVFALPGAAPAKGRGSLHVGGATSPPAKALEASDTGDKVTCPVCNRGMDHCKPGQRQQHVHTCLLKQSSSTKKAPXXXKTPATAPVTPTPQTPGSAVGVGAGGSGYGNMARSSVEETGPFAFGQGRKGREAPGP---------SSAS--DADAGAADSPRSTRVSLQGVFSPKPARRSPKTGDIPIQLEHRRDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNRKSGVGTKTNGFRGSTGTAEVRVPASKSTVAPKAKGPAECPVCQLHFGGRLGDWERQQHIKQCLES 4488
            MD EEID NSSQE   P          R K+            SPA+A     SSTL RFLGPAG PS SAW+DVNRQCPVCQQTGFSSRSLALHVN CL+  + A     D +   +A G ++ A   VGN  GRN ATA            +S  +   G+GS EG    R + +  P KSK+    G        KAAKK KT Q  R   +ER    +         + A DK +S T +     L  S   S P G  Q                 PLRRR LGLARP + H   SD  PT  AA+  SR   G D RAL+EIA+AQL Y+ EAS   PA     GGWLGT+LFP P  E    D    DC C  T  G+GA  + CG    V   G G       EN RVR RPASWGA P+    + GW   WP  G VD G  D CWGDGDGY+TL+ FP    P  T                           + + V A     L  +G     SPAP+SR DRFLQVF+RLQPAR AL LHE  PP+    P+       +A+V+  G R           N               G Q    PG   +M  SV  E G G   +   GTA SCE   V  L  P PKR AL T++  SA  +    +R  A I   P +S      A+  S S H                  N  G   +        N+   +  SRK   P PT     T+  Q     G     ++P  N+   VK  + +   P+      ++                                                A++ EN+ IG   R + A V R  ++    G  +P PR GSS  S  +   + GA+V  KR+S++ + + R  ++                       P  + A P SS+W   RSRGALA RASSGLLRSAD AA                       A+D  V+ + S+                 +GRKADV QKGSLTVV +HGATLR SWSID S E+GRL FGA L YDAVWYL PAD DCVGV RY ++PHP LAPTGGWIS  GRLRDDPY I+KA  +P+ +                                  +   G+R P   P+  Q         G +G EGL KST      G   +  +  +AGR RG           + P+ ESH +R S                                       S+V  LP A  A G   L    ATSP AKALEA+D+GDKVTCPVCNRGMDH K GQRQQHVH CL+KQ SS KK      T      TP+   P             G   RSS++  G    G+    R    P         SSA+  +  +G ++ PRS+RVSLQGVFSPKPA                RD                                               TN    S GTA               KG  ECPVC + FGGR G WERQ H++QCL+S
Sbjct:    2 MDAEEIDDNSSQEANLPPATLTLATKKRTKTKK---------DSPAVAP----SSTLTRFLGPAGPPSRSAWDDVNRQCPVCQQTGFSSRSLALHVNDCLERRARA-----DASDSESAAGGRKDAAGGVGNPDGRNTATA-----TTVGNEASSAVTDVTGSGSREGN-TRRMSREGTP-KSKAVHGRGGEKQVRQDKAAKKTKTLQGERAIDTERAASATSKARVSHTRNQAADKTKSNTRAALQHRLPNSTQSSSPDGSQQP---------------NPLRRRALGLARP-KGHQIVSDAMPTPAAASNASRARKGCDSRALDEIAQAQLLYLREASARGPA---HGGGWLGTKLFPAPDEEGESADDGSMDCWCVGTGGGEGAYRSSCG----VGECGTGRNTRMRKENRRVRGRPASWGARPNDE--QWGWFGTWPAGGSVDDGGVD-CWGDGDGYLTLKAFP----PPET-------------LVESDGEDERDGGGAVMPVDAARSMRLGEEG-----SPAPSSRVDRFLQVFSRLQPARRALRLHE--PPTPXXXPQDSGDNRANAKVKNVGTRSPPTAVAPTNKNTVASSS---------GPQQAERPGGSPTMRPSVEREPG-GAGNSARTGTARSCEGERVRELTMPPPKRTALETISEVSANNN----RRPGATIASSPVQSTSPAIIASFKSVSGHKISRKQPPQEPPQQRKPANRSGEEGSRRHEQEDRNRTSSEGSSRKLSLPAPTVRRTSTFEVQACS-GGVENSVSAPKGNSPRVVKTPAKIYGPPNESAADAASQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQTRRPVAVANENLTIGE-HRKRTAHVDRAPVDATTHGVPQPPPRHGSSTGSDEVKRSMPGATVAKKRASSSHERNVRVSSMDAGGHRRSQRDPP----------PGLQRAIPTSSQWNGSRSRGALASRASSGLLRSADLAARSENQRKENENAKVAPA------ANDGVVDLAGSNSSQLEEC----------EGRKADVRQKGSLTVVWEHGATLRDSWSIDSSHELGRLAFGALLDYDAVWYLSPADTDCVGVLRYSVVPHPRLAPTGGWISGSGRLRDDPYIIVKAEAAPSIRPSKAASRDRGD----------------------GRGGSGQRQPNLDPHHHQ---------GRVGVEGLTKSTHGAADGGYTAAAPSRGHAGRSRGTNXXXXXXAERYEPAEESHSDRVSAGPTAEGGRRTQPQTP-----------------------SRV--LPKAVSAGGSFGL----ATSPSAKALEANDSGDKVTCPVCNRGMDHWKSGQRQQHVHACLMKQPSSAKK------TRLAGDATPSASRPS------------GITHRSSLQFDGSSDPGESTTPRPERRPGVRRTEGTGSSANRQEGPSGPSEGPRSSRVSLQGVFSPKPA----------------RDPDG--------------------------------------------TNTVSASRGTAPXXXXXXXXXXX-XXKGLTECPVCGVSFGGRQGQWERQAHVQQCLDS 1353

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BLAST of mRNA_C-linearis_contig99.17155.1 vs. uniprot
Match: A0A7S4J0S2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4J0S2_9STRA)

HSP 1 Score: 61.6 bits (148), Expect = 9.020e-6
Identity = 36/107 (33.64%), Postives = 58/107 (54.21%), Query Frame = 1

Query: 2896 PQKGSLTVVCDHGATLRSSWSIDDSQ-EVGRLLFGASLGYDAVWYLDPA---------DEDCVGVRRYRILPHPLLAPT---------GGWISERGRLRDDPYTIIK 3159
            P  G++ +V + GAT+R  + ID+++  +G+L  G    Y    +L P          D++C+GV RY+I+  P+   T          GWIS+RGRL+ +PY I+K
Sbjct:  374 PVLGTVRIVSEKGATIREIFDIDEAKLSLGKLKHGDVRQYVEKRFLPPPEDEDEFDNDDDECIGVYRYKIILKPVDKETVDSELDHFNHGWISDRGRLKCEPYKILK 480

The following BLAST results are available for this feature:

BLAST of mRNA_C-linearis_contig99.17155.1 vs. uniprot

BLAST of mRNA_C-linearis_contig99.17155.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 2

ZOOM

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POSITION

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Match Name	E-value	Identity	Description
D7G7W0_ECTSI	1.680e-161	34.83	Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2...	[more]
A0A7S4J0S2_9STRA	9.020e-6	33.64	Hypothetical protein (Fragment) n=1 Tax=Odontella ...	[more]