mRNA_C-linearis_contig97.17102.1 (mRNA) Chordaria linearis ClinC8C monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Homology

BLAST of mRNA_C-linearis_contig97.17102.1 vs. uniprot
Match: D8LL05_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LL05_ECTSI)

HSP 1 Score: 280 bits (715), Expect = 5.280e-90
Identity = 150/162 (92.59%), Postives = 156/162 (96.30%), Query Frame = 2

Query:   95 MAAGQHQQSIDLSVLSLEQLNQMKTQHEEEVQTLSGNFMKLRDAQARYSESISAVEALGSKVEDKEILVPLTQSLYVPGRIVEADKMLVDVGTGYYVQKDQQKTAEFLGRKKEMVTTNLESLRSAVDAKRKNLEAIVMVMRRKIGEIETKRAEFKGGEEAKA 580
            MA GQ QQSIDLSVLSLEQLNQMKTQHEEEVQTLSGNFMKLRDAQAR+SESISAVEALGSK EDKEILVPLTQSLYVPGRIVEADKM+VDVGTGYYVQKDQQKTAEFLGRKK+MVTTNLESLR+A+D KRKNLEAIVMVMRRKIG+IETKRAEFK  EEAKA
Sbjct:    1 MAGGQQQQSIDLSVLSLEQLNQMKTQHEEEVQTLSGNFMKLRDAQARFSESISAVEALGSKTEDKEILVPLTQSLYVPGRIVEADKMMVDVGTGYYVQKDQQKTAEFLGRKKDMVTTNLESLRNAIDVKRKNLEAIVMVMRRKIGDIETKRAEFKSSEEAKA 162

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BLAST of mRNA_C-linearis_contig97.17102.1 vs. uniprot
Match: A0A835ZFR4_9STRA (Prefoldin subunit-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFR4_9STRA)

HSP 1 Score: 176 bits (447), Expect = 6.680e-50
Identity = 91/154 (59.09%), Postives = 118/154 (76.62%), Query Frame = 2

Query:   95 MAAGQHQQSIDLSVLSLEQLNQMKTQHEEEVQTLSGNFMKLRDAQARYSESISAVEALGSKVEDKEILVPLTQSLYVPGRIVEADKMLVDVGTGYYVQKDQQKTAEFLGRKKEMVTTNLESLRSAVDAKRKNLEAIVMVMRRKIGEIETKRAEF 556
            MA+   Q+ +DLS LSLEQLNQ+KTQH+EEVQTL+ N+  LRD  ARY E+ SAVEA+G K E +EILVPLTQSLYVPG+++E DK LVD+GTGYY +K Q++T EFL RK  MV  NL SLR  ++ KRK  E + MVMR+++ +IE  R+++
Sbjct:    1 MASVVGQREVDLSSLSLEQLNQLKTQHQEEVQTLTANYAALRDGLARYQEAKSAVEAMGRKAEGREILVPLTQSLYVPGKVIEGDKFLVDIGTGYYAEKSQRETEEFLTRKAGMVEANLASLREVIEMKRKAFETLTMVMRQRLSQIEENRSKY 154

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BLAST of mRNA_C-linearis_contig97.17102.1 vs. uniprot
Match: A0A2P6NP58_9EUKA (Prefoldin subunit 5 n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6NP58_9EUKA)

HSP 1 Score: 132 bits (331), Expect = 4.370e-33
Identity = 67/142 (47.18%), Postives = 105/142 (73.94%), Query Frame = 2

Query:  113 QQSIDLSVLSLEQLNQMKTQHEEEVQTLSGNFMKLRDAQARYSESISAVEALGSKVEDKEILVPLTQSLYVPGRIVEADKMLVDVGTGYYVQKDQQKTAEFLGRKKEMVTTNLESLRSAVDAKRKNLEAIVMVMRRKIGEIE 538
            QQ ID+S LSLEQLN  K Q EEEVQ LS ++ +L+ A AR+++S  A+ A+ ++ E K +LVPLT SL+VPG++   +++L+D+GTGYYV K  ++ ++F  RK +M+  N + +  AV  KRKNLE++++VM++KIG+++
Sbjct:    6 QQGIDISQLSLEQLNTFKQQFEEEVQVLSNSWQQLKLASARFTDSKDALSAIKTENEGKAMLVPLTTSLFVPGQLTNTEQVLIDIGTGYYVTKPVKQASDFFDRKIKMINDNADQVAQAVSVKRKNLESVLLVMQQKIGQMQ 147

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BLAST of mRNA_C-linearis_contig97.17102.1 vs. uniprot
Match: A0A7S3NIR8_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NIR8_9STRA)

HSP 1 Score: 131 bits (330), Expect = 7.050e-33
Identity = 72/149 (48.32%), Postives = 107/149 (71.81%), Query Frame = 2

Query:  113 QQSIDLSVLSLEQLNQMKTQHEEEVQTLSGNFMKLRDAQARYSESISAVEA--LGSKVEDKEILVPLTQSLYVPGRIVEADKMLVDVGTGYYVQKDQQKTAEFLGRKKEMVTTNLESLRSAVDAKRKNLEAIVMVMRRKIGEIETKRAE 553
            QQ ID+S LSLEQLN MK +HEE VQ LS     ++ A+ R+ ES + ++   L  + E KE+LVPLTQSLYV G +++AD++LVD+GTGY++QK  Q   E + RK ++VT N++S+ + V+ K++NL AIV VM+ K+ +I+ ++AE
Sbjct:    5 QQQIDISKLSLEQLNSMKQEHEESVQELSSQLETMKLAEGRFRESRNTLDIIKLDDQAEGKEMLVPLTQSLYVSGNVLDADQVLVDIGTGYFLQKSVQGAQEMIDRKLKVVTQNMDSIHTVVNQKQENLNAIVTVMQYKMQQIQKQKAE 153

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BLAST of mRNA_C-linearis_contig97.17102.1 vs. uniprot
Match: A0A7S2C3Z7_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2C3Z7_9STRA)

HSP 1 Score: 129 bits (323), Expect = 7.370e-32
Identity = 65/148 (43.92%), Postives = 104/148 (70.27%), Query Frame = 2

Query:  122 IDLSVLSLEQLNQMKTQHEEEVQTLSGNFMKLRDAQARYSESISAVEALGSKVEDKEILVPLTQSLYVPGRIVEADKMLVDVGTGYYVQKDQQKTAEFLGRKKEMVTTNLESLRSAVDAKRKNLEAIVMVMRRKIGEIETKRAEFKGG 565
            IDLS + + QLN +KT HE+E+  L+GN+  L+ AQ++ + ++  +  +GS+ E +EILVPLT SLYVPG I + +K+L+DVGTGY+V+K   K  +F+ RK +MVT N + +++    K+KNLE IVM+MR+++  ++  + + K G
Sbjct:   12 IDLSQMDINQLNDLKTSHEQEIDQLTGNWRTLKHAQSKLNTAVVCLNEVGSQ-EGREILVPLTPSLYVPGTICDTNKVLLDVGTGYFVEKSLAKAKDFVDRKNKMVTVNADQIQNVTQQKQKNLETIVMIMRQRMAMMQQAQEDAKAG 158

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BLAST of mRNA_C-linearis_contig97.17102.1 vs. uniprot
Match: M4B879_HYAAE (Uncharacterized protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4B879_HYAAE)

HSP 1 Score: 126 bits (317), Expect = 4.360e-31
Identity = 65/142 (45.77%), Postives = 105/142 (73.94%), Query Frame = 2

Query:  122 IDLSVLSLEQLNQMKTQHEEEVQTLSGNFMKLRDAQARYSESISAVEALGSKVEDKEILVPLTQSLYVPGRIVEADKMLVDVGTGYYVQKDQQKTAEFLGRKKEMVTTNLESLRSAVDAKRKNLEAIVMVMRRKIGEIETKR 547
            ++L  LSLEQL+ +KTQ E+E+Q L+ +F  LR+AQ+R+SES +A++++ +   +K++LVPLT SL++PG+I   D +LVDVGTGY+V++   K  +F+ RK E + +N E L++ VD KR  LEA++M+M++K+ E +  R
Sbjct:    8 VNLVDLSLEQLSSLKTQLEKELQQLTVSFRGLREAQSRFSESKAALQSMAAVDLNKDVLVPLTASLFIPGKIASKDDVLVDVGTGYFVEQSISKAEQFMDRKVEFLQSNTEQLKTVVDGKRNTLEAVLMIMQQKVQEAQPTR 149

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BLAST of mRNA_C-linearis_contig97.17102.1 vs. uniprot
Match: F0YDJ5_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YDJ5_AURAN)

HSP 1 Score: 125 bits (315), Expect = 8.680e-31
Identity = 64/145 (44.14%), Postives = 100/145 (68.97%), Query Frame = 2

Query:  122 IDLSVLSLEQLNQMKTQHEEEVQTLSGNFMKLRDAQARYSESISAVEALGSKVEDKEILVPLTQSLYVPGRIVEADKMLVDVGTGYYVQKDQQKTAEFLGRKKEMVTTNLESLRSAVDAKRKNLEAIVMVMRRKIGEIETKRAEF 556
            +D+S LSL+QLNQ+K+QHE+E+  L      L+ A+ R+ +S  A+ A+    E K +LVPLTQSLYVPG++ + D +LV++GTGYY++K +      + RK ++V  N E++ + V  K +N EAIVM+M+ K+ +I+ K+AEF
Sbjct:    1 MDISTLSLDQLNQLKSQHEQELNQLRERHSSLKQAEGRFRQSKDALAAISKDDEGKSMLVPLTQSLYVPGKLCDVDSLLVELGTGYYLEKKKDDADAMIDRKIKLVADNAENITTVVAQKTRNHEAIVMMMQHKMAQIQEKKAEF 145

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BLAST of mRNA_C-linearis_contig97.17102.1 vs. uniprot
Match: A0A7S2SQJ9_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SQJ9_9STRA)

HSP 1 Score: 122 bits (307), Expect = 1.360e-29
Identity = 63/135 (46.67%), Postives = 97/135 (71.85%), Query Frame = 2

Query:  122 IDLSVLSLEQLNQMKTQHEEEVQTLSGNFMKLRDAQARYSESISAVEALGSKVEDKEILVPLTQSLYVPGRIVEADKMLVDVGTGYYVQKDQQKTAEFLGRKKEMVTTNLESLRSAVDAKRKNLEAIVMVMRRKI 526
            IDLS + ++QL Q+K QHE+E+  L+ N+ +L++AQ +   S  A++ + S+ E  +ILVPLT+SLYVPG IVEAD++LV++GTGYY +K+     + +GRK  M++ N ++++  V  KR NLE IVMVMR ++
Sbjct:   16 IDLSQMPMDQLMQLKEQHEQEISELTTNWRQLKEAQIKLEASTEALKTVSSR-EGTDILVPLTESLYVPGNIVEADRVLVELGTGYYAEKNVPDAQDLIGRKVAMISANADNMQETVTQKRNNLETIVMVMRSRL 149

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BLAST of mRNA_C-linearis_contig97.17102.1 vs. uniprot
Match: H3G733_PHYRM (Uncharacterized protein n=14 Tax=Phytophthora TaxID=4783 RepID=H3G733_PHYRM)

HSP 1 Score: 121 bits (304), Expect = 2.220e-29
Identity = 63/137 (45.99%), Postives = 100/137 (72.99%), Query Frame = 2

Query:  113 QQSIDLSVLSLEQLNQMKTQHEEEVQTLSGNFMKLRDAQARYSESISAVEALGSKVEDKEILVPLTQSLYVPGRIVEADKMLVDVGTGYYVQKDQQKTAEFLGRKKEMVTTNLESLRSAVDAKRKNLEAIVMVMRRK 523
            Q  ++L  LSLEQLN +K Q E+E+Q L+ +F  LR+AQ+R++ES  A++A+ +   DKE+LVPLT S++VPG++    ++LVDVGTGY+V++   K  +F+ RK E + +N E L++ +D KR  LEA++M+M++K
Sbjct:    4 QNEVNLVDLSLEQLNSLKGQLEKELQQLTTSFGGLREAQSRFTESKEALKAMAAADLDKEVLVPLTASMFVPGKLSNKTEVLVDVGTGYFVEQSVDKAEQFMDRKVEFLQSNTEQLKTVIDGKRNMLEAVLMIMQQK 140

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BLAST of mRNA_C-linearis_contig97.17102.1 vs. uniprot
Match: A0A068S4K0_9FUNG (Prefoldin-domain-containing protein n=2 Tax=Lichtheimia TaxID=688353 RepID=A0A068S4K0_9FUNG)

HSP 1 Score: 121 bits (304), Expect = 3.340e-29
Identity = 68/141 (48.23%), Postives = 98/141 (69.50%), Query Frame = 2

Query:  107 QHQQSIDLSVLSLEQLNQMKTQHEEEVQTLSGNFMKLRDAQARYSESISAVEALGS-KVEDKEILVPLTQSLYVPGRIVEADKMLVDVGTGYYVQKDQQKTAEFLGRKKEMVTTNLESLRSAVDAKRKNLEAIVMVMRRKI 526
            Q QQ+++++ L L  L Q+KTQ EEE+  L+ ++ KLR AQAR+S+   +VE+L S K +DK ILVPLT SLYVPG++ + +K++VDVGTGYYV+K       F   K+E V  NLE L+  ++ K+ +L AIV VM+ K+
Sbjct:    4 QQQQTVNITDLDLPSLQQVKTQLEEELSHLTQSYGKLRGAQARFSDCADSVESLKSEKADDKTILVPLTSSLYVPGKLSDVEKVIVDVGTGYYVEKSLDGATSFYKTKEEYVKQNLEKLQETINGKQSSLRAIVNVMQDKV 144

The following BLAST results are available for this feature:

BLAST of mRNA_C-linearis_contig97.17102.1 vs. uniprot

BLAST of mRNA_C-linearis_contig97.17102.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25

ZOOM

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POSITION

0


Match Name	E-value	Identity	Description
D8LL05_ECTSI	5.280e-90	92.59	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A835ZFR4_9STRA	6.680e-50	59.09	Prefoldin subunit-domain-containing protein n=1 Ta...	[more]
A0A2P6NP58_9EUKA	4.370e-33	47.18	Prefoldin subunit 5 n=1 Tax=Planoprotostelium fung...	[more]
A0A7S3NIR8_9STRA	7.050e-33	48.32	Hypothetical protein n=1 Tax=Aureoumbra lagunensis...	[more]
A0A7S2C3Z7_9STRA	7.370e-32	43.92	Hypothetical protein n=1 Tax=Florenciella parvula ...	[more]
M4B879_HYAAE	4.360e-31	45.77	Uncharacterized protein n=1 Tax=Hyaloperonospora a...	[more]
F0YDJ5_AURAN	8.680e-31	44.14	Uncharacterized protein n=1 Tax=Aureococcus anopha...	[more]
A0A7S2SQJ9_9STRA	1.360e-29	46.67	Hypothetical protein n=1 Tax=Rhizochromulina marin...	[more]
H3G733_PHYRM	2.220e-29	45.99	Uncharacterized protein n=14 Tax=Phytophthora TaxI...	[more]
A0A068S4K0_9FUNG	3.340e-29	48.23	Prefoldin-domain-containing protein n=2 Tax=Lichth...	[more]

Pages

Properties


Property Name	Value
Taxonomic scope	Eukaryota
Seed ortholog score	282.7
Seed ortholog evalue	1.1e-73
Seed eggNOG ortholog	2880.D8LL05
Preferred name	PFDN5
KEGG rclass	RC00055,RC00523
KEGG ko	ko:K01881,ko:K03678,ko:K04797,ko:K09504
KEGG Reaction	R03661
KEGG Pathway	ko00970,ko03018,ko05203,map00970,map03018,map05203
KEGG Module	M00359,M00360,M00391
Hectar predicted targeting category	other localisation
GOs	GO:0001654,GO:0003674,GO:0003712,GO:0003714,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005829,GO:0006355,GO:0006357,GO:0007021,GO:0007275,GO:0007423,GO:0008092,GO:0008150,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0009966,GO:0009968,GO:0009987,GO:0010468,GO:0010556,GO:0010557,GO:0010558,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0010646,GO:0010648,GO:0015631,GO:0016043,GO:0016272,GO:0019219,GO:0019222,GO:0022607,GO:0023051,GO:0023057,GO:0030111,GO:0030178,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0032153,GO:0032501,GO:0032502,GO:0032784,GO:0032786,GO:0032968,GO:0032991,GO:0034243,GO:0034622,GO:0043010,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043933,GO:0044085,GO:0044424,GO:0044444,GO:0044464,GO:0045892,GO:0045893,GO:0045934,GO:0045935,GO:0045944,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048585,GO:0048731,GO:0048856,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051173,GO:0051252,GO:0051253,GO:0051254,GO:0051286,GO:0060041,GO:0060255,GO:0060828,GO:0065003,GO:0065007,GO:0071840,GO:0080090,GO:0090090,GO:0140110,GO:1902679,GO:1902680,GO:1903506,GO:1903507,GO:1903508,GO:2000112,GO:2000113,GO:2001141
EggNOG free text desc.	sister chromatid segregation
EggNOG OGs	COG1730@1,KOG3048@2759
Ec32 ortholog description	Prefoldin
Ec32 ortholog	Ec-11_006250.1
EC	6.1.1.15
COG Functional cat.	O
Best tax level	Eukaryota
Best eggNOG OG	NA\|NA\|NA
BRITE	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03019,ko03029,ko03110
Exons	5
Model size	1388
Cds size	489
Stop	1
Start	1