mRNA_C-linearis_contig97.17102.1 (mRNA) Chordaria linearis ClinC8C monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_C-linearis_contig97.17102.1
Unique Name	mRNA_C-linearis_contig97.17102.1
Type	mRNA
Organism	Chordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)

Homology

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BLAST of mRNA_C-linearis_contig97.17102.1 vs. uniprot
Match: D8LL05_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LL05_ECTSI)

HSP 1 Score: 280 bits (715), Expect = 5.280e-90
Identity = 150/162 (92.59%), Postives = 156/162 (96.30%), Query Frame = 2

Query:   95 MAAGQHQQSIDLSVLSLEQLNQMKTQHEEEVQTLSGNFMKLRDAQARYSESISAVEALGSKVEDKEILVPLTQSLYVPGRIVEADKMLVDVGTGYYVQKDQQKTAEFLGRKKEMVTTNLESLRSAVDAKRKNLEAIVMVMRRKIGEIETKRAEFKGGEEAKA 580
            MA GQ QQSIDLSVLSLEQLNQMKTQHEEEVQTLSGNFMKLRDAQAR+SESISAVEALGSK EDKEILVPLTQSLYVPGRIVEADKM+VDVGTGYYVQKDQQKTAEFLGRKK+MVTTNLESLR+A+D KRKNLEAIVMVMRRKIG+IETKRAEFK  EEAKA
Sbjct:    1 MAGGQQQQSIDLSVLSLEQLNQMKTQHEEEVQTLSGNFMKLRDAQARFSESISAVEALGSKTEDKEILVPLTQSLYVPGRIVEADKMMVDVGTGYYVQKDQQKTAEFLGRKKDMVTTNLESLRNAIDVKRKNLEAIVMVMRRKIGDIETKRAEFKSSEEAKA 162

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BLAST of mRNA_C-linearis_contig97.17102.1 vs. uniprot
Match: A0A835ZFR4_9STRA (Prefoldin subunit-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFR4_9STRA)

HSP 1 Score: 176 bits (447), Expect = 6.680e-50
Identity = 91/154 (59.09%), Postives = 118/154 (76.62%), Query Frame = 2

Query:   95 MAAGQHQQSIDLSVLSLEQLNQMKTQHEEEVQTLSGNFMKLRDAQARYSESISAVEALGSKVEDKEILVPLTQSLYVPGRIVEADKMLVDVGTGYYVQKDQQKTAEFLGRKKEMVTTNLESLRSAVDAKRKNLEAIVMVMRRKIGEIETKRAEF 556
            MA+   Q+ +DLS LSLEQLNQ+KTQH+EEVQTL+ N+  LRD  ARY E+ SAVEA+G K E +EILVPLTQSLYVPG+++E DK LVD+GTGYY +K Q++T EFL RK  MV  NL SLR  ++ KRK  E + MVMR+++ +IE  R+++
Sbjct:    1 MASVVGQREVDLSSLSLEQLNQLKTQHQEEVQTLTANYAALRDGLARYQEAKSAVEAMGRKAEGREILVPLTQSLYVPGKVIEGDKFLVDIGTGYYAEKSQRETEEFLTRKAGMVEANLASLREVIEMKRKAFETLTMVMRQRLSQIEENRSKY 154

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BLAST of mRNA_C-linearis_contig97.17102.1 vs. uniprot
Match: A0A2P6NP58_9EUKA (Prefoldin subunit 5 n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6NP58_9EUKA)

HSP 1 Score: 132 bits (331), Expect = 4.370e-33
Identity = 67/142 (47.18%), Postives = 105/142 (73.94%), Query Frame = 2

Query:  113 QQSIDLSVLSLEQLNQMKTQHEEEVQTLSGNFMKLRDAQARYSESISAVEALGSKVEDKEILVPLTQSLYVPGRIVEADKMLVDVGTGYYVQKDQQKTAEFLGRKKEMVTTNLESLRSAVDAKRKNLEAIVMVMRRKIGEIE 538
            QQ ID+S LSLEQLN  K Q EEEVQ LS ++ +L+ A AR+++S  A+ A+ ++ E K +LVPLT SL+VPG++   +++L+D+GTGYYV K  ++ ++F  RK +M+  N + +  AV  KRKNLE++++VM++KIG+++
Sbjct:    6 QQGIDISQLSLEQLNTFKQQFEEEVQVLSNSWQQLKLASARFTDSKDALSAIKTENEGKAMLVPLTTSLFVPGQLTNTEQVLIDIGTGYYVTKPVKQASDFFDRKIKMINDNADQVAQAVSVKRKNLESVLLVMQQKIGQMQ 147

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BLAST of mRNA_C-linearis_contig97.17102.1 vs. uniprot
Match: A0A7S3NIR8_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NIR8_9STRA)

HSP 1 Score: 131 bits (330), Expect = 7.050e-33
Identity = 72/149 (48.32%), Postives = 107/149 (71.81%), Query Frame = 2

Query:  113 QQSIDLSVLSLEQLNQMKTQHEEEVQTLSGNFMKLRDAQARYSESISAVEA--LGSKVEDKEILVPLTQSLYVPGRIVEADKMLVDVGTGYYVQKDQQKTAEFLGRKKEMVTTNLESLRSAVDAKRKNLEAIVMVMRRKIGEIETKRAE 553
            QQ ID+S LSLEQLN MK +HEE VQ LS     ++ A+ R+ ES + ++   L  + E KE+LVPLTQSLYV G +++AD++LVD+GTGY++QK  Q   E + RK ++VT N++S+ + V+ K++NL AIV VM+ K+ +I+ ++AE
Sbjct:    5 QQQIDISKLSLEQLNSMKQEHEESVQELSSQLETMKLAEGRFRESRNTLDIIKLDDQAEGKEMLVPLTQSLYVSGNVLDADQVLVDIGTGYFLQKSVQGAQEMIDRKLKVVTQNMDSIHTVVNQKQENLNAIVTVMQYKMQQIQKQKAE 153

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BLAST of mRNA_C-linearis_contig97.17102.1 vs. uniprot
Match: A0A7S2C3Z7_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2C3Z7_9STRA)

HSP 1 Score: 129 bits (323), Expect = 7.370e-32
Identity = 65/148 (43.92%), Postives = 104/148 (70.27%), Query Frame = 2

Query:  122 IDLSVLSLEQLNQMKTQHEEEVQTLSGNFMKLRDAQARYSESISAVEALGSKVEDKEILVPLTQSLYVPGRIVEADKMLVDVGTGYYVQKDQQKTAEFLGRKKEMVTTNLESLRSAVDAKRKNLEAIVMVMRRKIGEIETKRAEFKGG 565
            IDLS + + QLN +KT HE+E+  L+GN+  L+ AQ++ + ++  +  +GS+ E +EILVPLT SLYVPG I + +K+L+DVGTGY+V+K   K  +F+ RK +MVT N + +++    K+KNLE IVM+MR+++  ++  + + K G
Sbjct:   12 IDLSQMDINQLNDLKTSHEQEIDQLTGNWRTLKHAQSKLNTAVVCLNEVGSQ-EGREILVPLTPSLYVPGTICDTNKVLLDVGTGYFVEKSLAKAKDFVDRKNKMVTVNADQIQNVTQQKQKNLETIVMIMRQRMAMMQQAQEDAKAG 158

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BLAST of mRNA_C-linearis_contig97.17102.1 vs. uniprot
Match: M4B879_HYAAE (Uncharacterized protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4B879_HYAAE)

HSP 1 Score: 126 bits (317), Expect = 4.360e-31
Identity = 65/142 (45.77%), Postives = 105/142 (73.94%), Query Frame = 2

Query:  122 IDLSVLSLEQLNQMKTQHEEEVQTLSGNFMKLRDAQARYSESISAVEALGSKVEDKEILVPLTQSLYVPGRIVEADKMLVDVGTGYYVQKDQQKTAEFLGRKKEMVTTNLESLRSAVDAKRKNLEAIVMVMRRKIGEIETKR 547
            ++L  LSLEQL+ +KTQ E+E+Q L+ +F  LR+AQ+R+SES +A++++ +   +K++LVPLT SL++PG+I   D +LVDVGTGY+V++   K  +F+ RK E + +N E L++ VD KR  LEA++M+M++K+ E +  R
Sbjct:    8 VNLVDLSLEQLSSLKTQLEKELQQLTVSFRGLREAQSRFSESKAALQSMAAVDLNKDVLVPLTASLFIPGKIASKDDVLVDVGTGYFVEQSISKAEQFMDRKVEFLQSNTEQLKTVVDGKRNTLEAVLMIMQQKVQEAQPTR 149

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BLAST of mRNA_C-linearis_contig97.17102.1 vs. uniprot
Match: F0YDJ5_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YDJ5_AURAN)

HSP 1 Score: 125 bits (315), Expect = 8.680e-31
Identity = 64/145 (44.14%), Postives = 100/145 (68.97%), Query Frame = 2

Query:  122 IDLSVLSLEQLNQMKTQHEEEVQTLSGNFMKLRDAQARYSESISAVEALGSKVEDKEILVPLTQSLYVPGRIVEADKMLVDVGTGYYVQKDQQKTAEFLGRKKEMVTTNLESLRSAVDAKRKNLEAIVMVMRRKIGEIETKRAEF 556
            +D+S LSL+QLNQ+K+QHE+E+  L      L+ A+ R+ +S  A+ A+    E K +LVPLTQSLYVPG++ + D +LV++GTGYY++K +      + RK ++V  N E++ + V  K +N EAIVM+M+ K+ +I+ K+AEF
Sbjct:    1 MDISTLSLDQLNQLKSQHEQELNQLRERHSSLKQAEGRFRQSKDALAAISKDDEGKSMLVPLTQSLYVPGKLCDVDSLLVELGTGYYLEKKKDDADAMIDRKIKLVADNAENITTVVAQKTRNHEAIVMMMQHKMAQIQEKKAEF 145

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BLAST of mRNA_C-linearis_contig97.17102.1 vs. uniprot
Match: A0A7S2SQJ9_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SQJ9_9STRA)

HSP 1 Score: 122 bits (307), Expect = 1.360e-29
Identity = 63/135 (46.67%), Postives = 97/135 (71.85%), Query Frame = 2

Query:  122 IDLSVLSLEQLNQMKTQHEEEVQTLSGNFMKLRDAQARYSESISAVEALGSKVEDKEILVPLTQSLYVPGRIVEADKMLVDVGTGYYVQKDQQKTAEFLGRKKEMVTTNLESLRSAVDAKRKNLEAIVMVMRRKI 526
            IDLS + ++QL Q+K QHE+E+  L+ N+ +L++AQ +   S  A++ + S+ E  +ILVPLT+SLYVPG IVEAD++LV++GTGYY +K+     + +GRK  M++ N ++++  V  KR NLE IVMVMR ++
Sbjct:   16 IDLSQMPMDQLMQLKEQHEQEISELTTNWRQLKEAQIKLEASTEALKTVSSR-EGTDILVPLTESLYVPGNIVEADRVLVELGTGYYAEKNVPDAQDLIGRKVAMISANADNMQETVTQKRNNLETIVMVMRSRL 149

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BLAST of mRNA_C-linearis_contig97.17102.1 vs. uniprot
Match: H3G733_PHYRM (Uncharacterized protein n=14 Tax=Phytophthora TaxID=4783 RepID=H3G733_PHYRM)

HSP 1 Score: 121 bits (304), Expect = 2.220e-29
Identity = 63/137 (45.99%), Postives = 100/137 (72.99%), Query Frame = 2

Query:  113 QQSIDLSVLSLEQLNQMKTQHEEEVQTLSGNFMKLRDAQARYSESISAVEALGSKVEDKEILVPLTQSLYVPGRIVEADKMLVDVGTGYYVQKDQQKTAEFLGRKKEMVTTNLESLRSAVDAKRKNLEAIVMVMRRK 523
            Q  ++L  LSLEQLN +K Q E+E+Q L+ +F  LR+AQ+R++ES  A++A+ +   DKE+LVPLT S++VPG++    ++LVDVGTGY+V++   K  +F+ RK E + +N E L++ +D KR  LEA++M+M++K
Sbjct:    4 QNEVNLVDLSLEQLNSLKGQLEKELQQLTTSFGGLREAQSRFTESKEALKAMAAADLDKEVLVPLTASMFVPGKLSNKTEVLVDVGTGYFVEQSVDKAEQFMDRKVEFLQSNTEQLKTVIDGKRNMLEAVLMIMQQK 140

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BLAST of mRNA_C-linearis_contig97.17102.1 vs. uniprot
Match: A0A068S4K0_9FUNG (Prefoldin-domain-containing protein n=2 Tax=Lichtheimia TaxID=688353 RepID=A0A068S4K0_9FUNG)

HSP 1 Score: 121 bits (304), Expect = 3.340e-29
Identity = 68/141 (48.23%), Postives = 98/141 (69.50%), Query Frame = 2

Query:  107 QHQQSIDLSVLSLEQLNQMKTQHEEEVQTLSGNFMKLRDAQARYSESISAVEALGS-KVEDKEILVPLTQSLYVPGRIVEADKMLVDVGTGYYVQKDQQKTAEFLGRKKEMVTTNLESLRSAVDAKRKNLEAIVMVMRRKI 526
            Q QQ+++++ L L  L Q+KTQ EEE+  L+ ++ KLR AQAR+S+   +VE+L S K +DK ILVPLT SLYVPG++ + +K++VDVGTGYYV+K       F   K+E V  NLE L+  ++ K+ +L AIV VM+ K+
Sbjct:    4 QQQQTVNITDLDLPSLQQVKTQLEEELSHLTQSYGKLRGAQARFSDCADSVESLKSEKADDKTILVPLTSSLYVPGKLSDVEKVIVDVGTGYYVEKSLDGATSFYKTKEEYVKQNLEKLQETINGKQSSLRAIVNVMQDKV 144

The following BLAST results are available for this feature:

BLAST of mRNA_C-linearis_contig97.17102.1 vs. uniprot

BLAST of mRNA_C-linearis_contig97.17102.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25

ZOOM

x 1

POSITION

0


Match Name	E-value	Identity	Description
D8LL05_ECTSI	5.280e-90	92.59	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A835ZFR4_9STRA	6.680e-50	59.09	Prefoldin subunit-domain-containing protein n=1 Ta...	[more]
A0A2P6NP58_9EUKA	4.370e-33	47.18	Prefoldin subunit 5 n=1 Tax=Planoprotostelium fung...	[more]
A0A7S3NIR8_9STRA	7.050e-33	48.32	Hypothetical protein n=1 Tax=Aureoumbra lagunensis...	[more]
A0A7S2C3Z7_9STRA	7.370e-32	43.92	Hypothetical protein n=1 Tax=Florenciella parvula ...	[more]
M4B879_HYAAE	4.360e-31	45.77	Uncharacterized protein n=1 Tax=Hyaloperonospora a...	[more]
F0YDJ5_AURAN	8.680e-31	44.14	Uncharacterized protein n=1 Tax=Aureococcus anopha...	[more]
A0A7S2SQJ9_9STRA	1.360e-29	46.67	Hypothetical protein n=1 Tax=Rhizochromulina marin...	[more]
H3G733_PHYRM	2.220e-29	45.99	Uncharacterized protein n=14 Tax=Phytophthora TaxI...	[more]
A0A068S4K0_9FUNG	3.340e-29	48.23	Prefoldin-domain-containing protein n=2 Tax=Lichth...	[more]

Pages

Properties


Property Name	Value
Taxonomic scope	Eukaryota
Seed ortholog score	282.7
Seed ortholog evalue	1.1e-73
Seed eggNOG ortholog	2880.D8LL05
Preferred name	PFDN5
KEGG rclass	RC00055,RC00523
KEGG ko	ko:K01881,ko:K03678,ko:K04797,ko:K09504
KEGG Reaction	R03661
KEGG Pathway	ko00970,ko03018,ko05203,map00970,map03018,map05203
KEGG Module	M00359,M00360,M00391
Hectar predicted targeting category	other localisation
GOs	GO:0001654,GO:0003674,GO:0003712,GO:0003714,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005829,GO:0006355,GO:0006357,GO:0007021,GO:0007275,GO:0007423,GO:0008092,GO:0008150,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0009966,GO:0009968,GO:0009987,GO:0010468,GO:0010556,GO:0010557,GO:0010558,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0010646,GO:0010648,GO:0015631,GO:0016043,GO:0016272,GO:0019219,GO:0019222,GO:0022607,GO:0023051,GO:0023057,GO:0030111,GO:0030178,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0032153,GO:0032501,GO:0032502,GO:0032784,GO:0032786,GO:0032968,GO:0032991,GO:0034243,GO:0034622,GO:0043010,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043933,GO:0044085,GO:0044424,GO:0044444,GO:0044464,GO:0045892,GO:0045893,GO:0045934,GO:0045935,GO:0045944,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048585,GO:0048731,GO:0048856,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051173,GO:0051252,GO:0051253,GO:0051254,GO:0051286,GO:0060041,GO:0060255,GO:0060828,GO:0065003,GO:0065007,GO:0071840,GO:0080090,GO:0090090,GO:0140110,GO:1902679,GO:1902680,GO:1903506,GO:1903507,GO:1903508,GO:2000112,GO:2000113,GO:2001141
EggNOG free text desc.	sister chromatid segregation
EggNOG OGs	COG1730@1,KOG3048@2759
Ec32 ortholog description	Prefoldin
Ec32 ortholog	Ec-11_006250.1
EC	6.1.1.15
COG Functional cat.	O
Best tax level	Eukaryota
Best eggNOG OG	NA\|NA\|NA
BRITE	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03019,ko03029,ko03110
Exons	5
Model size	1388
Cds size	489
Stop	1
Start	1

Relationships

The following UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1622930835.676109-UTR-C-linearis_contig97:395761..396566	1622930835.676109-UTR-C-linearis_contig97:395761..396566	Chordaria linearis ClinC8C monoicous	UTR	C-linearis_contig97 395762..396566 -
1690881274.4426694-UTR-C-linearis_contig97:395761..396566	1690881274.4426694-UTR-C-linearis_contig97:395761..396566	Chordaria linearis ClinC8C monoicous	UTR	C-linearis_contig97 395762..396566 -
1622930835.7502809-UTR-C-linearis_contig97:398143..398162	1622930835.7502809-UTR-C-linearis_contig97:398143..398162	Chordaria linearis ClinC8C monoicous	UTR	C-linearis_contig97 398144..398162 -
1690881274.5003262-UTR-C-linearis_contig97:398143..398162	1690881274.5003262-UTR-C-linearis_contig97:398143..398162	Chordaria linearis ClinC8C monoicous	UTR	C-linearis_contig97 398144..398162 -
1622930835.7872128-UTR-C-linearis_contig97:398602..398677	1622930835.7872128-UTR-C-linearis_contig97:398602..398677	Chordaria linearis ClinC8C monoicous	UTR	C-linearis_contig97 398603..398677 -
1690881274.5104632-UTR-C-linearis_contig97:398602..398677	1690881274.5104632-UTR-C-linearis_contig97:398602..398677	Chordaria linearis ClinC8C monoicous	UTR	C-linearis_contig97 398603..398677 -

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1622930835.690568-CDS-C-linearis_contig97:396566..396722	1622930835.690568-CDS-C-linearis_contig97:396566..396722	Chordaria linearis ClinC8C monoicous	CDS	C-linearis_contig97 396567..396722 -
1690881274.456488-CDS-C-linearis_contig97:396566..396722	1690881274.456488-CDS-C-linearis_contig97:396566..396722	Chordaria linearis ClinC8C monoicous	CDS	C-linearis_contig97 396567..396722 -
1622930835.7042818-CDS-C-linearis_contig97:397128..397257	1622930835.7042818-CDS-C-linearis_contig97:397128..397257	Chordaria linearis ClinC8C monoicous	CDS	C-linearis_contig97 397129..397257 -
1690881274.4666224-CDS-C-linearis_contig97:397128..397257	1690881274.4666224-CDS-C-linearis_contig97:397128..397257	Chordaria linearis ClinC8C monoicous	CDS	C-linearis_contig97 397129..397257 -
1622930835.7223856-CDS-C-linearis_contig97:397682..397751	1622930835.7223856-CDS-C-linearis_contig97:397682..397751	Chordaria linearis ClinC8C monoicous	CDS	C-linearis_contig97 397683..397751 -
1690881274.4767225-CDS-C-linearis_contig97:397682..397751	1690881274.4767225-CDS-C-linearis_contig97:397682..397751	Chordaria linearis ClinC8C monoicous	CDS	C-linearis_contig97 397683..397751 -
1622930835.7350152-CDS-C-linearis_contig97:398008..398143	1622930835.7350152-CDS-C-linearis_contig97:398008..398143	Chordaria linearis ClinC8C monoicous	CDS	C-linearis_contig97 398009..398143 -
1690881274.489971-CDS-C-linearis_contig97:398008..398143	1690881274.489971-CDS-C-linearis_contig97:398008..398143	Chordaria linearis ClinC8C monoicous	CDS	C-linearis_contig97 398009..398143 -

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_C-linearis_contig97.17102.1	prot_C-linearis_contig97.17102.1	Chordaria linearis ClinC8C monoicous	polypeptide	C-linearis_contig97 396567..398143 -

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at C-linearis_contig97:395762..398677-
coding sequence from alignment at C-linearis_contig97:395762..398677-

protein sequence of mRNA_C-linearis_contig97.17102.1

>prot_C-linearis_contig97.17102.1 ID=prot_C-linearis_contig97.17102.1|Name=mRNA_C-linearis_contig97.17102.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=163bp
MAAGQHQQSIDLSVLSLEQLNQMKTQHEEEVQTLSGNFMKLRDAQARYSE
SISAVEALGSKVEDKEILVPLTQSLYVPGRIVEADKMLVDVGTGYYVQKD
QQKTAEFLGRKKEMVTTNLESLRSAVDAKRKNLEAIVMVMRRKIGEIETK
RAEFKGGEEAKA*

mRNA from alignment at C-linearis_contig97:395762..398677-

Legend: UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_C-linearis_contig97.17102.1 ID=mRNA_C-linearis_contig97.17102.1|Name=mRNA_C-linearis_contig97.17102.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=2916bp|location=Sequence derived from alignment at C-linearis_contig97:395762..398677- (Chordaria linearis ClinC8C monoicous)
AAGCGCCAGAGAGAGCGAGAGAGCGAGAGAGTGGAGCGTGCTTACGGCAG
CATCCCGCGAGGTAGGAGAAATAAGGTGAGAAGGTTCGATCTTTTGAGAG
GTAGACCTGTTGCTGAGCAATCTGAAATCCGCTGCTGCTGTCTGCTGCTT
TGTCCAGGGTTACTCTGTGCCCGCGATGGGAGTACTACCAATAGCGTGGG
AGTAGAGCTGTTCCGCACGTCACCCACTGTGTTACATGTGTGCAAAATGG
CCGCCGGTGTGGCCGCTAAAAGCACAAGCAGATCCCCCACTGCCTGCTTG
CAAAAGGCACGTCAAGAATAGCGTCGAAACACCTTCTGGTGATGCCACAC
AGCAGGTGACGTTTGAACCCGCAAATACCGGCAAGCGTTACTACTGCTGT
AAGTGTCGCACCTACCCATAATTAACATAAAGCTAAAGGCATGCATTCGT
GGCACATGGTCTATAAGACAGAGCTTGATGTCTTGCTGTGCTGCGAACCT
TCCACTTTTTGCAAGGCCGAGCGAAGCAAGCACCATGGCGGCGGGGCAGC
ATCAGCAGAGCATCGACCTTTCGGTCCTGTCGCTGGAGCAGCTCAACCAG
ATGAAGACCCAGCACGAGGAGGAGGTGCAGACCCTCTCGGGGAACTTCAT
GAAGCTCAGAGACGCGCAGGTTTGAAGAACACATCCATCGTTTGCTTGCT
TGGTTATAACCCTAAGTTTCTGGAAGCTCGGATTTCCGACCCATGTGCTG
GGTTCCATTCGTAATTTCCTTGCAATCCAAGCAATCGAGAGATAAATGCT
AATACCACGTCATGCCATGCTTCCTGAGTGGTAGACTACAGCCCACTACT
CCAGCCCTCTACGCCCCTTCACCACCACACACATCACACACCCCTTCAAC
GTCGAATTTGAATGGCATGGCGCCAGGCACGTTATTCTGAGTCCATCTCA
GCCGTGGAAGCGTTGGGGAGCAAGGTGGAGGACAAGGAAATTCTGGTAAG
AAGAAAGAGGACTTTCCGTTTTGCCGCACATCTTTTTTCGTCTTTTTCTT
TTGCCTCCAGTCATGAATTGATAAGAGTGAGACCGACAGATGCACCACCC
GTTATTGCCCTTCTGTCAGCGCTCAAGCCCCCTTTCCCGAGTATTGGGAT
GCAATCGCCCCCCAGTGCATCTCTACATACTGCTGTAGGTTGGATGTGGT
CAGATTTTTTCTTCTCTGCTTTTGAGTAATGTGAAGCATCTTCCAGGGTT
CTCTTGTGTCTTTGCAGTGCGATGCTGCTGCCACTGCCTCGTCGTTTCTC
CTTGCCATTACATTGTATTTTGCAACGTTACTCCGACGGTCTGGCTCGTG
TCGCCCCTCCTGCCGGCATGCGCTCGCCACTACTGCCGCTGCATGCATGC
TGCGTACCCTCGTTTGTCAGGTGCCGTTGACGCAATCGCTGTACGTGCCG
GGGCGTATCGTGGAGGCGGACAAGATGCTGGTGGACGTGGGGACGGGCTA
CTACGTGCAAAAGGACCAGCAGAAAACGGCAGAGTTCTTGGGCAGGAAAG
TGAGTGCGTCGTGAAGACATCCTTAAGGAGGTTGCGTGTGAGGTACGGGG
GTGTGCCCTGTAGCGAGTAGATTTTCTACGAGGGCATGTTATGTTGGAGT
AAAGCTCGTCGTTTGTAGCAGAAGGCAAGCGGGGTTCTCTTATCCTCTGA
CGACAAGCTCGCCCCTTTCCGGTTCCCCATTATCTTATTCTCCCCTACCC
CACGTGTTCCACCCGATCGGCAGTTGACGTTGGTGCTGCCTACCACTGGC
ACTGTTGTCCCGCCCTGCAACACGCAACACTCTTCTTACCTCTCCCTGCA
GCAGACTCGTACCCGCCCACGAAATCCTGTACACCCACCGTGCGAACACG
CCCGCGTTGTCTTCAACTTGCAACCATGTTTTTTCAATGGTACTGCTTTC
CTCAGAAAGAGATGGTGACGACCAACTTGGAGTCTCTACGCAGCGCGGTC
GACGCCAAACGCAAGAATCTCGAGGCGATTGTGATGGTGATGCGGAGAAA
GATCGGCGAGATAGAGACCAAGCGAGCGGAGTTCAAGGGTGGCGAGGAGG
CGAAAGCATGAAGGGGGAAGGGGCCGGGACTGGAGAGAGCTTACGCGTTT
ATAGTAGCGCGCGGATACGGATGGGTACTTTTCAGTTTTTATGTCAGGTG
GACTTGCCGTGGATCTGTGTGGTCTGATGCGCTGATTGTGTGGGCATGGC
CTCTACGCAGTCTGCTGGTAGCTGCAGCATCGTGCGGTGGGTCCCAGAAG
ATGAAGGTTCCTCTCTTACGGTTAGGCACTGGCATCCTTTCGGGTGCTTT
TCGAAGTTCGTCGTTGTTTATGAAAGCATCTTTTGTTTCGGACCCGTGTA
CTACATGGTACCAGCGACTTGTAGCTTGGCAGGGCGACTTTCGAAAGGTT
ATGGTAGGAAGCACGGGTTCGATCTTGCTTCACAGCAGTTCTGCGCAAAG
GGTAAATGTTGCGCCCTTGTGACGTTTTTTGCGGAAGATGCGCCTCGAGA
GTCTAGAGAACAGCAATCCGGATGTGCTAAGTTCTTGTGTTTTTTTTGGT
TGCTCTGACAATACAACGATCTTTTGATCTGTTCGACCGGCTTGTCGGCT
GGGACGAAATCGGTTCGGAAATGTATGTCCCCCAAGAATCAAGCCGCTCA
TGCTGTAGTAGTTGGAGTTAGGTGGTACAAACCAGCTTGACGATGTGTTT
TGAAGGGTCGTTGAACCGGATCGGTGCAGCACCAGGCCAAATAGAAGTAT
CATGAATGGTTAAAATCATCCAAAAGATGAGGGTGTGTGGGTACATGGAG
AACGGGACAAGCAATAGGTCGCTGCTCTGCTCAACTGCCAAACGTGAACG
AGCGCACATAGACCCG

Coding sequence (CDS) from alignment at C-linearis_contig97:395762..398677-

>mRNA_C-linearis_contig97.17102.1 ID=mRNA_C-linearis_contig97.17102.1|Name=mRNA_C-linearis_contig97.17102.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=978bp|location=Sequence derived from alignment at C-linearis_contig97:395762..398677- (Chordaria linearis ClinC8C monoicous)
ATGGCGGCGGGGCAGCATCAGCAGAGCATCGACCTTTCGGTCCTGTCGCT
GGAGCAGCTCAACCAGATGAAGACCCAGCACGAGGAGGAGGTGCAGACCC
TCTCGGGGAACTTCATGAAGCTCAGAGACGCGCAGATGGCGGCGGGGCAG
CATCAGCAGAGCATCGACCTTTCGGTCCTGTCGCTGGAGCAGCTCAACCA
GATGAAGACCCAGCACGAGGAGGAGGTGCAGACCCTCTCGGGGAACTTCA
TGAAGCTCAGAGACGCGCAGGCACGTTATTCTGAGTCCATCTCAGCCGTG
GAAGCGTTGGGGAGCAAGGTGGAGGACAAGGAAATTCTGGCACGTTATTC
TGAGTCCATCTCAGCCGTGGAAGCGTTGGGGAGCAAGGTGGAGGACAAGG
AAATTCTGGTGCCGTTGACGCAATCGCTGTACGTGCCGGGGCGTATCGTG
GAGGCGGACAAGATGCTGGTGGACGTGGGGACGGGCTACTACGTGCAAAA
GGACCAGCAGAAAACGGCAGAGTTCTTGGGCAGGAAAGTGCCGTTGACGC
AATCGCTGTACGTGCCGGGGCGTATCGTGGAGGCGGACAAGATGCTGGTG
GACGTGGGGACGGGCTACTACGTGCAAAAGGACCAGCAGAAAACGGCAGA
GTTCTTGGGCAGGAAAAAAGAGATGGTGACGACCAACTTGGAGTCTCTAC
GCAGCGCGGTCGACGCCAAACGCAAGAATCTCGAGGCGATTGTGATGGTG
ATGCGGAGAAAGATCGGCGAGATAGAGACCAAGCGAGCGGAGTTCAAGGG
TGGCGAGGAGGCGAAAGCATGAAAAGAGATGGTGACGACCAACTTGGAGT
CTCTACGCAGCGCGGTCGACGCCAAACGCAAGAATCTCGAGGCGATTGTG
ATGGTGATGCGGAGAAAGATCGGCGAGATAGAGACCAAGCGAGCGGAGTT
CAAGGGTGGCGAGGAGGCGAAAGCATGA