Homology
BLAST of mRNA_C-linearis_contig97.17074.1 vs. uniprot
Match:
D8LKZ6_ECTSI (Endo/excinuclease amino terminal domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKZ6_ECTSI)
HSP 1 Score: 332 bits (851), Expect = 1.570e-107
Identity = 218/360 (60.56%), Postives = 231/360 (64.17%), Query Frame = 1
Query: 370 RKKFFHCYLLQSQDPKHKRSTYIGFTVDPSRRIRQHNGGINGGAYRTKRKRPWDMVAIVHGFPSKSSALQFETAWQHPQRDRRIKVKVRDLPVDSRRTVGVPSKLRLCKAMLCLDPWARYGLGIRFLREEYATCYAKLHLPLXXXVDGDPDTELSTGVQQGLPVYTPPPASPENRLEAYRCALCGGSSGVTVDGGPLVWRVDDSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGETQEGEEGESEDDDF-------LKLSGCSQGSRAGGRIAQTRRVPASGGRSGRECRPSPSPAGGQDSVVLVDTTSDRHDSENNSEVRDGE--TQPSPPRLPLAERLRLRRLGSC 1422
RKKFFHCYLLQSQDPKHKRSTYIGFTVDP RRIRQHNG I GGA+RTKRKRPWDMVAIVHGFPSKSSALQFE AWQHPQRDRRIKVKV DLPVDSRRTVGVP KLRLCKAMLCLDPWARYGLGIRFLREEYA Y+KL+LP V GDPDTELSTG Q+GLPVY PP S E RLEA XXXXXXXXXXXXXXXXXX + GEE L L + S G Q R PASG G SP+ A G + VDTTSDR+DS+ + E + T SPP+LPLAERLRLRRL C
Sbjct: 7 RKKFFHCYLLQSQDPKHKRSTYIGFTVDPGRRIRQHNGDIIGGAFRTKRKRPWDMVAIVHGFPSKSSALQFEAAWQHPQRDRRIKVKVPDLPVDSRRTVGVPGKLRLCKAMLCLDPWARYGLGIRFLREEYAASYSKLNLPQPLPVKGDPDTELSTGAQEGLPVYKSPPGSQEERLEAQXXXXXX-----------XXXXXXXXXXXXXXXXXXXXXXXXXXDGDGHDSDGAGGWSSDAGSTDFISQPYPGEEXXXXXXXXXXXSCWRLSLERAGKDSEGSG---QPERFPASGEMPGGV--KSPALANGNKHISFVDTTSDRYDSDGSEEGDQMKKITGQSPPKLPLAERLRLRRLRDC 350
BLAST of mRNA_C-linearis_contig97.17074.1 vs. uniprot
Match:
A0A836CE53_9STRA (GIY-YIG domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CE53_9STRA)
HSP 1 Score: 150 bits (380), Expect = 9.570e-40
Identity = 70/122 (57.38%), Postives = 85/122 (69.67%), Query Frame = 1
Query: 427 STYIGFTVDPSRRIRQHNGGINGGAYRTKRKRPWDMVAIVHGFPSKSSALQFETAWQHPQRDRRIKVKVRDLPVDSRRTVGVPSKLRLCKAMLCLDPWARYGLGIRFLREEYATCYAKLHLP 792
STYIGFTV P RRIRQHNG I GA RT+ KRPW M +V GFPSKS+ALQFE AWQHP +DR +K KV L + R + G+ +KL +CKA++CL+PW RYGLG F + A + LP
Sbjct: 2 STYIGFTVHPKRRIRQHNGEIKAGARRTRMKRPWQMALVVTGFPSKSAALQFEWAWQHPYKDRHVKGKVGALALKGRGSYGLKAKLAICKALMCLEPWCRYGLGTHFADNDIAAVFRAAALP 123
BLAST of mRNA_C-linearis_contig97.17074.1 vs. uniprot
Match:
A0A5J4Y6I9_9CHLO (Structure-specific endonuclease subunit SLX1 homolog n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4Y6I9_9CHLO)
HSP 1 Score: 142 bits (358), Expect = 2.480e-35
Identity = 70/129 (54.26%), Postives = 86/129 (66.67%), Query Frame = 1
Query: 379 FFHCYLLQSQDPKHKRSTYIGFTVDPSRRIRQHNGGINGGAYRTKRKRPWDMVAIVHGFPSKSSALQFETAWQHPQRDRRIKVKVRDLPVDSRRTVGVPSKLRLCKAMLCLDPWARYGLGIRFLREEYA 765
F+ CYLL S DPK+K TYIGFTV+P RR+RQHNG I GA+RTKR RPWDMV +V+GFP+K ALQFE AWQHP + ++ + L + R G K+RL ML LDPW Y L ++ L YA
Sbjct: 4 FYGCYLLTSLDPKNKGRTYIGFTVNPRRRLRQHNGEITAGAHRTKRGRPWDMVLVVYGFPTKVQALQFEWAWQHPTASKAVREAAQRLGTIAMR--GAKGKVRLLFEMLSLDPWCYYPLTVQLLSTSYA 130
BLAST of mRNA_C-linearis_contig97.17074.1 vs. uniprot
Match:
D8QRY0_SELML (GIY-YIG domain-containing protein (Fragment) n=5 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8QRY0_SELML)
HSP 1 Score: 137 bits (344), Expect = 1.730e-34
Identity = 65/129 (50.39%), Postives = 88/129 (68.22%), Query Frame = 1
Query: 379 FFHCYLLQSQDPKHKRSTYIGFTVDPSRRIRQHNGGINGGAYRTKRKRPWDMVAIVHGFPSKSSALQFETAWQHPQRDRRIKVKVRDLPVDSRRTVGVPSKLRLCKAMLCLDPWARYGLGIRFLREEYA 765
F+ CYLL+S +P+ K TYIGFTV+P RRIRQHNG I GA+RTK+KRPW+MV V+GF SK+ ALQFE AWQHP+ + + + P + R G+ K+++ AMLC W+R L ++F E+A
Sbjct: 1 FYGCYLLRSINPRFKGQTYIGFTVNPRRRIRQHNGEITCGAFRTKKKRPWEMVLCVYGFSSKTDALQFEWAWQHPKLSKEVVLPAEVKPKNLR---GIAGKIKILHAMLCSPKWSRMKLTVQFFSSEHA 126
BLAST of mRNA_C-linearis_contig97.17074.1 vs. uniprot
Match:
A0A2I0KXX6_PUNGR (GIY-YIG domain-containing protein n=1 Tax=Punica granatum TaxID=22663 RepID=A0A2I0KXX6_PUNGR)
HSP 1 Score: 135 bits (340), Expect = 1.870e-34
Identity = 64/118 (54.24%), Postives = 82/118 (69.49%), Query Frame = 1
Query: 373 KKFFHCYLLQSQDPKHKRSTYIGFTVDPSRRIRQHNGGINGGAYRTKRKRPWDMVAIVHGFPSKSSALQFETAWQHPQRDRRIKVKVRDLPVDSRRTVGVPSKLRLCKAMLCLDPWAR 726
++F+ CYLL S P+HK TYIGFTV+P RRIRQHNG + GA+RTK KRPW+MV ++GFP+ SALQFE AWQHP R V VR+ + + G+ +K++L AML L PW R
Sbjct: 27 RRFYGCYLLVSLSPRHKGQTYIGFTVNPRRRIRQHNGELRSGAWRTKNKRPWEMVVCIYGFPTNVSALQFEWAWQHP----RESVAVREAAANFKSLSGITNKIKLAYAMLTLPPWQR 140
BLAST of mRNA_C-linearis_contig97.17074.1 vs. uniprot
Match:
UPI001F03346F (structure-specific endonuclease subunit SLX1 homolog n=1 Tax=Xenia sp. Carnegie-2017 TaxID=2897299 RepID=UPI001F03346F)
HSP 1 Score: 138 bits (348), Expect = 3.440e-34
Identity = 78/195 (40.00%), Postives = 109/195 (55.90%), Query Frame = 1
Query: 364 EARKKFFHCYLLQSQDPKHKRSTYIGFTVDPSRRIRQHNGGIN-GGAYRTKRKRPWDMVAIVHGFPSKSSALQFETAWQHPQRDRRIKVKVRDLPVDSRRTVGVPSKLRLCKAMLCLDPWARYGLGIRFLREEYATCYAKL-----HLPLXXXVDGDPDTELSTGVQQGLPVYTPPPASP---ENRLEAYRCALC 921
E +F+ CYLL S +PK+K TYIGFTVDP+RRIRQHNGGI GGA++T ++ PW+M+ +HGFP++ SAL+FE AWQHP + RR+K V + V R+ ML + PW R L IR+L++EY + L H+P+ V +P + P ++ E LE C +C
Sbjct: 4 EEESRFYGCYLLYSLNPKYKGRTYIGFTVDPNRRIRQHNGGIEKGGAHKTSKRGPWEMILTIHGFPNEISALRFEWAWQHPMKSRRLKHVVEKKKSSEK---SVQFCFRVLTEMLRVGPWNRLPLTIRWLKDEYMMDFDTLKQPPIHMPI---------------VYGSIPSWKKPKSADIAREEELETKTCCIC 180
BLAST of mRNA_C-linearis_contig97.17074.1 vs. uniprot
Match:
A0A5E4G6P4_PRUDU (Structure-specific endonuclease subunit SLX1 homolog n=6 Tax=Prunus TaxID=3754 RepID=A0A5E4G6P4_PRUDU)
HSP 1 Score: 136 bits (342), Expect = 1.390e-33
Identity = 65/129 (50.39%), Postives = 84/129 (65.12%), Query Frame = 1
Query: 376 KFFHCYLLQSQDPKHKRSTYIGFTVDPSRRIRQHNGGINGGAYRTKRKRPWDMVAIVHGFPSKSSALQFETAWQHPQRDRRIKVKVRDLPVDSRRTVGVPSKLRLCKAMLCLDPWARYGLGIRFLREEY 762
+FF CYLL S+ P++K TYIGFTV+P RRIRQHNG I GA+RTKRKRPW+MV ++GFP+ SALQFE AWQHP + VR + G+ SK++L ML L PW + ++F +Y
Sbjct: 26 RFFACYLLSSRSPRYKGHTYIGFTVNPRRRIRQHNGEIAQGAWRTKRKRPWEMVLCIYGFPTNVSALQFEWAWQHPT----VSKAVRQAAASFKSPRGLVSKIKLAYTMLTLPPWQSLNITVKFFSTQY 150
BLAST of mRNA_C-linearis_contig97.17074.1 vs. uniprot
Match:
UPI0006AB688C (structure-specific endonuclease subunit SLX1-like n=1 Tax=Brassica napus TaxID=3708 RepID=UPI0006AB688C)
HSP 1 Score: 132 bits (333), Expect = 1.850e-33
Identity = 65/118 (55.08%), Postives = 80/118 (67.80%), Query Frame = 1
Query: 373 KKFFHCYLLQSQDPKHKRSTYIGFTVDPSRRIRQHNGGINGGAYRTKRKRPWDMVAIVHGFPSKSSALQFETAWQHPQRDRRIKVKVRDLPVDSRRTVGVPSKLRLCKAMLCLDPWAR 726
K+FF CY+L S P+HK TYIGFTV+P RRIRQHNG I GAYRTK+KRPW+MV ++GFP+K SALQFE AWQHP R + VR+ + G+ S ++L ML L W R
Sbjct: 26 KEFFACYILTSLSPRHKGHTYIGFTVNPRRRIRQHNGEITSGAYRTKKKRPWEMVLCIYGFPTKVSALQFEWAWQHP----RESLAVREAAAAFKSISGLASNIKLAYTMLSLPAWNR 139
BLAST of mRNA_C-linearis_contig97.17074.1 vs. uniprot
Match:
UPI001068F671 (structure-specific endonuclease subunit SLX1 homolog n=1 Tax=Dendronephthya gigantea TaxID=151771 RepID=UPI001068F671)
HSP 1 Score: 136 bits (343), Expect = 1.970e-33
Identity = 71/144 (49.31%), Postives = 92/144 (63.89%), Query Frame = 1
Query: 364 EARKKFFHCYLLQSQDPKHKRSTYIGFTVDPSRRIRQHNGGIN-GGAYRTKRKRPWDMVAIVHGFPSKSSALQFETAWQHPQRDRRIKVKVRDLPVDSRRTVGVPSKLRLCKAMLCLDPWARYGLGIRFLREEYATCYAKLHLP 792
E + KF+ CYLL +PK+K TYIGFTVDP+RRI+QHNGG+ GGAYRT K PW+MV VHGFP++ SAL+FE AWQHP R RR+K V + + R+ ML + PW R L I++L+E+Y + L P
Sbjct: 4 EEKSKFYGCYLLYCLNPKYKGRTYIGFTVDPNRRIKQHNGGVQKGGAYRTSNKGPWEMVLTVHGFPNEISALRFEWAWQHPFRSRRLKRVVANKKSTEK---NFAFYFRVLTEMLRIGPWNRLALTIQWLKEDYHMDFDLLKQP 144
BLAST of mRNA_C-linearis_contig97.17074.1 vs. uniprot
Match:
A0A061RKW1_9CHLO (Structure-specific endonuclease subunit SLX1 homolog n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061RKW1_9CHLO)
HSP 1 Score: 136 bits (343), Expect = 2.080e-33
Identity = 71/140 (50.71%), Postives = 90/140 (64.29%), Query Frame = 1
Query: 373 KKFFHCYLLQSQDPKHKRSTYIGFTVDPSRRIRQHNGGINGGAYRTKRKRPWDMVAIVHGFPSKSSALQFETAWQHPQRDRRIKVKVRDLPVDSRRTVGVPSKLRLCKAMLCLDPWARYGLGIRFLREEYATCYAKLHLP 792
KKFF CYLL S DPK K TYIGFTV+P RRIRQHNG I GA+RTK+ RPWDM +++GFP+K ALQFE AWQHP ++ +L R GV K+RL ML ++P+ Y L ++FL +Y+ A + P
Sbjct: 3 KKFFGCYLLASLDPKCKGRTYIGFTVNPRRRIRQHNGQIVNGAHRTKKGRPWDMALVLYGFPTKIHALQFEWAWQHPSTSLAVRDAYNNLT--KRERGGVAGKIRLLIEMLRVEPFCFYQLTLQFLSSKYSAMRAGMPSP 140
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig97.17074.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 vs UniRef90 )
Total hits: 25
0 1 Expect = 1.57e-107 / Id = 60.56 Expect = 9.57e-40 / Id = 57.38 Expect = 2.48e-35 / Id = 54.26 Expect = 1.73e-34 / Id = 50.39 Expect = 1.87e-34 / Id = 54.24 Expect = 3.44e-34 / Id = 40.00 Expect = 1.39e-33 / Id = 50.39 Expect = 1.85e-33 / Id = 55.08 Expect = 1.97e-33 / Id = 49.31 Expect = 2.08e-33 / Id = 50.71 Sequence D8LKZ6_ECTSI A0A836CE53_9STRA A0A5J4Y6I9_9CHLO D8QRY0_SELML A0A2I0KXX6_PUNGR UPI001F03346F A0A5E4G6P4_PRUDU UPI0006AB688C UPI001068F671 A0A061RKW1_9CHLO Pages
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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name Value
Taxonomic scope Eukaryota Seed ortholog score 342.0 Seed ortholog evalue 3.6e-91 Seed eggNOG ortholog 2880.D8LKZ6 KEGG ko ko:K15078 KEGG Pathway ko03460,map03460 Hectar predicted targeting category other localisation GOs GO:0000228,GO:0000723,GO:0001325,GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004520,GO:0004536,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005694,GO:0006139,GO:0006259,GO:0006725,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0008821,GO:0009893,GO:0009987,GO:0010604,GO:0010638,GO:0016043,GO:0016787,GO:0016788,GO:0016888,GO:0016889,GO:0016893,GO:0016894,GO:0017108,GO:0019219,GO:0019222,GO:0022607,GO:0031323,GO:0031325,GO:0031974,GO:0031981,GO:0032200,GO:0032204,GO:0032206,GO:0032991,GO:0033043,GO:0033044,GO:0033557,GO:0034641,GO:0042592,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0044085,GO:0044087,GO:0044089,GO:0044237,GO:0044238,GO:0044260,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044446,GO:0044454,GO:0044464,GO:0045935,GO:0046483,GO:0048256,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051052,GO:0051054,GO:0051128,GO:0051130,GO:0051171,GO:0051173,GO:0051276,GO:0060249,GO:0060255,GO:0065007,GO:0065008,GO:0070013,GO:0071704,GO:0071840,GO:0080090,GO:0090304,GO:0090305,GO:0090656,GO:0090737,GO:0140097,GO:1901360,GO:1904429,GO:1904431,GO:2001252 EggNOG free text desc. 5'-flap endonuclease activity EggNOG OGs KOG3005@1,KOG3005@2759 Ec32 ortholog description GIY-YIG nuclease superfamily Ec32 ortholog Ec-11_006130.1 COG Functional cat. L Best tax level Eukaryota Best eggNOG OG NA|NA|NA BRITE ko00000,ko00001,ko01000,ko03400 Exons 7 Model size 1431 Cds size 1176 Stop 1 Start 1
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1622930830.890399-CDS-C-linearis_contig97:206944..207103 1622930830.890399-CDS-C-linearis_contig97:206944..207103 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig97 206945..207103 - 1690881271.9617314-CDS-C-linearis_contig97:206944..207103 1690881271.9617314-CDS-C-linearis_contig97:206944..207103 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig97 206945..207103 - 1622930830.9294002-CDS-C-linearis_contig97:207136..207487 1622930830.9294002-CDS-C-linearis_contig97:207136..207487 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig97 207137..207487 - 1690881271.9755588-CDS-C-linearis_contig97:207136..207487 1690881271.9755588-CDS-C-linearis_contig97:207136..207487 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig97 207137..207487 - 1622930830.953453-CDS-C-linearis_contig97:207751..207947 1622930830.953453-CDS-C-linearis_contig97:207751..207947 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig97 207752..207947 - 1690881271.990252-CDS-C-linearis_contig97:207751..207947 1690881271.990252-CDS-C-linearis_contig97:207751..207947 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig97 207752..207947 - 1622930830.9753304-CDS-C-linearis_contig97:208413..208631 1622930830.9753304-CDS-C-linearis_contig97:208413..208631 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig97 208414..208631 - 1690881272.006543-CDS-C-linearis_contig97:208413..208631 1690881272.006543-CDS-C-linearis_contig97:208413..208631 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig97 208414..208631 - 1622930830.9922333-CDS-C-linearis_contig97:209162..209190 1622930830.9922333-CDS-C-linearis_contig97:209162..209190 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig97 209163..209190 - 1690881272.0239367-CDS-C-linearis_contig97:209162..209190 1690881272.0239367-CDS-C-linearis_contig97:209162..209190 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig97 209163..209190 - 1622930831.0082521-CDS-C-linearis_contig97:209471..209695 1622930831.0082521-CDS-C-linearis_contig97:209471..209695 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig97 209472..209695 - 1690881272.0376945-CDS-C-linearis_contig97:209471..209695 1690881272.0376945-CDS-C-linearis_contig97:209471..209695 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig97 209472..209695 -
The following UTR feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1622930831.0202303-UTR-C-linearis_contig97:209695..209707 1622930831.0202303-UTR-C-linearis_contig97:209695..209707 Chordaria linearis ClinC8C monoicous UTR C-linearis_contig97 209696..209707 - 1690881272.054154-UTR-C-linearis_contig97:209695..209707 1690881272.054154-UTR-C-linearis_contig97:209695..209707 Chordaria linearis ClinC8C monoicous UTR C-linearis_contig97 209696..209707 - 1622930831.0345705-UTR-C-linearis_contig97:210033..210276 1622930831.0345705-UTR-C-linearis_contig97:210033..210276 Chordaria linearis ClinC8C monoicous UTR C-linearis_contig97 210034..210276 - 1690881272.0648375-UTR-C-linearis_contig97:210033..210276 1690881272.0648375-UTR-C-linearis_contig97:210033..210276 Chordaria linearis ClinC8C monoicous UTR C-linearis_contig97 210034..210276 -
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig97.17074.1
>prot_C-linearis_contig97.17074.1 ID=prot_C-linearis_contig97.17074.1|Name=mRNA_C-linearis_contig97.17074.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=392bp
MLLASTRMEDGDAALSTSTATIHKAPKGHSTRKKGPEARKKFFHCYLLQS back to top mRNA from alignment at C-linearis_contig97:206945..210276-
Legend: UTR polypeptide CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-linearis_contig97.17074.1 ID=mRNA_C-linearis_contig97.17074.1|Name=mRNA_C-linearis_contig97.17074.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=3332bp|location=Sequence derived from alignment at C-linearis_contig97:206945..210276- (Chordaria linearis ClinC8C monoicous)CGCACAGCTGTCATCGCATCTTGATCTCCCTTTGCTGGTCGTGGTTGGCG
TTCGGATCAGGAGAGTGCGGCCACTGGACGACCCACCCCTTCTATAGGTT
GGAACTCCAGCAGTGTGTGGTTTTCTCTCCTTAGGCCTGCATTGCTGAGC
GAAAACGTGGTTACGCAGCGTGTGTACAAAAAAAAGTCAACGGGAACGGG
GGAACGCGCAGCGAGCAACTCCGTCCGTGCTGCACTGCTGCAG GTATGTA
TGTATGTGATGAAGCTGGCTCGGCTGGCGATGCACCCCATAATATCAGTA
CACATCATACTACTTTATGCGTGTGCTGATGTGCACACAGGTTGTGGTTG
ATGAACGTAGAAGGCTGCTCTGGTCGTAGATCACGTAGCAACGTGTTTTG
AGACCAAGACTACAAAAACGACTCCGTACACCGTCTCCGTGTGGTGTTTG
TTTGCCGGTGCAGGCAACCTTGATGTGAACGCTTATCTCTCTCCCACTCC
CCCGTCTCTTGACTGGCCACACGGTGGTTTTCGGACTTGACCCCCTGCAT
CCCGCCCACCATCGAGAAGCAGCACTGCTTT ATGCTGTTAGCGTCAACAA
GAATGGAAGACGGAGATGCAGCCTTATCCACGTCCACTGCAACAATCCAC
AAAGCCCCGAAAGGGCACAGCACGCGCAAGAAAGGGCCCGAGGCGCGCAA
GAAGTTCTTTCACTGCTACCTGCTGCAGTCACAAGACCCCAAGCACAAGC
GTTCGACGTATATTGGCTTCACCGTAGATCCCAGCCGAAGAATACGGCAA
CACAA GTGAGACTACATCTTCTACAAAGTAGTCTTGTTCTCGGCGGTCGA
TTGACACGGATAAGACTACATACTGTAGGTTTCCCCGCAAAGCTGTATTG
TCCAAGCACACGTCTGCAATACTGCAGGTTCATGCACGATATGGACACCA
TGTTTCGAAGTATTTGTATTTAGTCTGTGCTGTGGCCCATTCTCAATCTC
CTCGTTGCTCCGCACTACACGTTTCTCTCGCTCGCTTTTGCAACCCCATA
TCCGAATCGACGGCACACCTGCCCTTGATATTCCAGCGGAGGCATCAATG
GCGGCGCATACCGG GTGAGGCGCAAGGCGTTGGTGTTGTGTTGTGTTGTG
TTGTGTTGCCGCTGCACAGTTGTACAAGTACAAGATAATCCGCTGTGTGT
AAGGCCACGAAACCAATCTGCTGGTAGCCTGCGCCCTCGTAGAGCATAGC
GAGAAGATAGAGTAGCTTCAAGAGGCGTGTTTTTTTCGCGGGAATGCCTG
AATACCTGACGTTCTGCGTTTGGGTGCCAGCTGCAGCAGCACTCATCCTG
GATCTCTCTCAACATGCTGAAACAGCTTCATCAGTATGTGCAAACCTGCG
AAGCTACCGCAGATGCTTAAGCTTGGACATCAGCTTCTCTTCGGCATATT
ACTCACCGCCAACAGCAGTGTTGATGTCGTGTGGGCCATGGTGACTATCT
TCTGCGATACATGTTTGTCGATGATCGTATGGTAAGCACTAGCTCGCCAG
TACTACGGCTCTTGTACGCTCGTTGTCATCTTGCTCTCAGCTTGCTCGTG
CGTCCTTCCATCGCGGACTGTTTTTCTGTCGTCCTCACGTTCCAGACAAA
GCGCAAACGCCCTTGGGATATGGTGGCCATAGTGCACGGTTTCCCTTCAA
AATCGTCCGCGCTGCAGTTCGAGACGGCCTGGCAGCACCCCCAACGAGAC
CGCCGCATTAAGGTCAAAGTTAGAGATTTGCCGGTGGACTCACGTCGAAC
GGTCGGGGTACCGAGCAAGCTCCGCCTCTGCAAGGCCATGCTGTGCCTCG
ACCCTTGGGCAAG GTGAGTCGAGTTATCGCTGGCTTCTCACCCCTGGGTT
CACAAGTACGTGTTCCGGCGGCAGTCTTGAATATTCGTATTTGTAGCCGG
CGCAGAAGGAATAGGCTTACATTGTACTTCGTAGATGTTTTTGCGCAGTG
GCTTCAGTCTCCCGAGAAGGAAGAAGGAACTTCAAATTTGTCGTTTTGTT
TCTTGTGCTCTCCATTCTTCCTCTGCACTGTTGCCAAGGTACTGTAGTTG
GCGCCCTAAGGATTCTCTCGTATTCCAGAGTACTCGGCTGTTCTCCTGCA
GAGACCGTCAATACCCACGCTTTGTTCTCTCGTCTCCAAGTGCTTGAACG
ACACACTGATCAAGGATGTAGGCCACTCAATGCATACCTACGTCTACCAC
GACGCCCCCCCCCGCCCAAACCAAAACGACGCACCCATCTACCCACCCAC
ACCATGCCACGTCGCTGACGAAACGACAGGTACGGCCTGGGCATCCGCTT
CTTGCGAGAGGAGTACGCGACATGCTACGCCAAGCTGCACCTGCCCTTGC
CCCTCCCGGTCGACGGCGACCCCGACACCGAACTCAGCACGGGGGTTCAG
CAGGGCCTACCTGTCTACACACCGCCCCCTGCTTCTCCAGAGAACCGACT
CGAGGCATACAGGTGCGCCCTTTGC GTGCAGTCTTTTCTCGCGGGCGCGA
CCCTGATGGCGTGCTACCACTGCGGAGCGGCGGCGCACGTGAGGTGCCTG
GCGGACCGAATGCTCGGCGAGGCCGACGGGGGCGACGAGTCGGAGGTCAT
CCCCTCCGAGGGTCCTTGTTGGGCGCCGGCTTGTGCGCGGCGACTTCTGT
GGTCGCGGCTTGTGAAGGGCGTGCAGGCGTACCGCCCGAGATCAAGCCGC
CCGGCGGAGGACGAGGATCCAGAAGACACGCCCGTGGAGGGTGGAAGTAG
CGGTGTGACGGTCGACGGCGGGCCTCTCGTGTGGCGAGTAGACGATAGCA
GCGACGATGAGGACGACGAATATGGCGGTCGCGGCGGTGCTGACGAGTCG
GGGTGTGACAGCGAACAAGCCGCCCGGGAAGATGGTGGAGGTTGGAGCGG
CGGTTCGGCTTCGAGAAACAACGGGGAAACTCAGGAGGGGGAGGAGGGGG
AAAGTGAGGACGATGACTTCTTGAAGCTGAGTGGATGCTCTCAAGGCAGC
CGAGCAGGCGGCCGGATTGCGCAGACGAGGCGTGTTCCGGCATCCGGGGG
GCGGTCAGGAAGGGAATGTAGACCGTCTCCATCGCCCGCC GTTGGTCGAA
CGCAGGCGGCGAAGTCTAGAAAGGGCGGGCAAGACTCGGTGGTACTCGTC
GACACCACCAGCGATCGGCACGACAGCGAGAATAATAGTGAGGTTCGAGA
CGGGGAAACACAACCATCACCGCCGAGGCTACCGCTGGCCGAACGACTTC
GGTTGAGGAGATTGGGTAGCTGTCACGGGTAG back to top Coding sequence (CDS) from alignment at C-linearis_contig97:206945..210276-
>mRNA_C-linearis_contig97.17074.1 ID=mRNA_C-linearis_contig97.17074.1|Name=mRNA_C-linearis_contig97.17074.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=2352bp|location=Sequence derived from alignment at C-linearis_contig97:206945..210276- (Chordaria linearis ClinC8C monoicous) back to top