mRNA_C-linearis_contig96.17045.1 (mRNA) Chordaria linearis ClinC8C monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-linearis_contig96.17045.1

>prot_C-linearis_contig96.17045.1 ID=prot_C-linearis_contig96.17045.1|Name=mRNA_C-linearis_contig96.17045.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=561bp
MVHHKEMAQLLLESGALWASRLNVPWFLAGAGLGVPVAVGAVSTWDSKLL
SLVTTLGGVIGGVAADRLSTTALDTLAGSDFSCYDVLTKGVGPACLALVV
LSRNIRSEPTVAVKPAAFVALVSLLLEPLFSAHVLGTTATTAAAAAAATT
RNGAAGVLLRRALSKVTGGRRRGTAAAGAAAAAAKAAVSRARWLTGGAQL
ALWAAVVLAYANLSLRLSRAGGGSGRTVAGYMTALRSLAAKKRGTGGWVR
IDRWGKGGGGWRGEGEEGGTAPNSPVPGGWGGGWGGGWGVRDNSRPRAHS
LLGSLYETLMSGGGWRGGGRVDARAMALSQYQTMDDNGPPFERGEVTVRS
IYCFGLDAAITGRPPSASLNNGGAGAGADHDAAGGGGGIIAGGTSRPFYV
TITLGGVTAKTSPRPGFSPSFTEVFPLGCDCPIRGAFLTVAVVDSFETGR
SVRGDRIVGEVHLPLDAAQLVPGTGTSSHGGEPSYVPSSGNDTGGGGGGG
GGGSGAAYRLSGDWELQGALGGSLGGARVGADIVIHGPPSPSSAAGRLRR
RRESVGWYAR*
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mRNA from alignment at C-linearis_contig96:473803..478802+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-linearis_contig96.17045.1 ID=mRNA_C-linearis_contig96.17045.1|Name=mRNA_C-linearis_contig96.17045.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=5000bp|location=Sequence derived from alignment at C-linearis_contig96:473803..478802+ (Chordaria linearis ClinC8C monoicous)
CTTGCCGCTGGCCGCGCTTTCCTTGCCGCTCTCTCGCTTCGACTCGCAGC AGCAGACAACCACCACAGCCCTCGTTATTGGTCATCTTTGGGACCTACTT TCCTTGGCGTTCACTCCATCCGCTGCGTGGCAGCTTCTTTTCTCGGGACC AGCAAAAAAGAGGACGGGACTTGACGCATGGTCCACCACAAGGAAATGGC TCAACTATTGTTGGAATCTGGGGCGCTGTGGGCGTCCCGGCTGAACGTTC CGTGGTTCCTGGCCGGGGCTGGGCTCGGCGTACCGGTGGCTGTTGGAGCT GTGTCTACCTGGGACAGCAAGCTTCTGAGCCTGGTGAGCTAGCTGCTGTG GGAGCTTGATACGTGTTTGGTTTGATTGGAGAAATAATAAGAAAAGATGA AATAATCCGCACGCAAATTATTTGCTCTTCGTTCGTGGAGCCACGCGATT GAATCAAGTTGTAATACAATACACACGTGTGCCGTATGATATGCACTCGA TCACACAGAAGTTACTTACCGGTTTCGGTGGGAGCTTTGGTGGTATATGC TTTGAGGTGTGCGCTGCTACGTTAGGAAATGTTCATGGCAGCAAAGCAGG TCTGCAATAGATCGAACCGAACGCGATCCACATTTTTTTGAGGGTTTTTT TTGGAGACCCACGGTTTTACCCGATGGGGGGGATATGGAAGGAGGGCATC AGTGGGAGAGGGACGGAACGCACGGGTGGAGCTTGGGTGGACCCGACATA GTTTCTGGCCATTTAAGCACTGCTGCAGACGTCTTTTCGTGCGTTAGTAT CTCGACCGCGGCTTGTTTTTTGTCGGTAGGGTATTTTTCCTTTCGGCAAG CTGCCGTTAGCTGGATGAGAAACTGAAACTTCCCTGTACGGCCCTTCATC CCTGAAGGAAGGAAGTGTAGAGTCCCATTCCCAACGCTGGGCCGCTGCAA GCAGTAGCTTTTCGCCGCCGAAGCAGGATTCCCTGTACGGCCCCTTCATC CGTGAAGGGAGAAAGCTTAGCGTCCCATTCCCAACGCTGGGCCGCTGCAA GGAGTAGCTTTTCGCCGCCGAAGGAGGAATCAATTTTGTCGACAACTTTG CGACAGCAACTTAATCTACTGCTATACCATATTTCTTTGTTTCACGAAGA GCCGTCTGGCTCTCCCCACCATTTAATCTCCATGCCGTTACTGTTTCATC CTGCACTTAAAGGGCGCTTGGATATCCCGCTCGTGGGCTGGCTCTTTATT GTATACCTCAACACGGAGTAATGTTGTACGGTTGTGCTGTTTTCACTTCT TTTTTGTTTTGTCAGGTGACTACCCTGGGAGGTGTTATTGGCGGCGTCGC CGCTGACCGCCTCTCGACCACGGCCTTGGAGTGAGTTGAATATTATCTTG TGCACATGTCGTGACCAGCCCCTTGCCTGCATGTTGGCTACAAACTCTCG GAGCGAGACGTACCCTGAAAGCAGCCTCCTTGTAGGTAAATCGGACACGT TGTACGGACATGATCGGAGATCCGATCATTCGAGTATGTCCCATACCACT TTGCGCGTGCTCTTGTGCAAACATCGAGGCAGGGAGCTTCGTTAGTTTTA AGCAGTAGCGCGCACACACGATACCACCCCAACAAAAGACGCAGAACCGC ACCGATGATGCGGAAGAAAGAGTTGCTCGCCGTATGAATGCAGCTTGACC AGAAACACGTTTCCAGTAAGTTCAATCCTGTCAGAATTCGTATTCGTATT TCACCGCATCGCATTTAAGAAGCGTTCTTCATCAACCGACGATTTCCAGA ACCATCACACAGGGTATCCGCTCCCTCTCAGCCCATCACTAGCGCGCCTC TCTGTCCCGTACTCGCATCTTCAGCTTCAAACCAACCAGTGTCACGCCCC CATTCCCTTCCTATGATCGCTCTTCAGCACCCTGGCGGGCAGCGACTTCA GCTGCTACGACGTGCTGACCAAGGGCGTCGGGCCGGCCTGCCTCGCGCTC GTCGTGCTCAGCCGCAACATCCGCAGCGAGCCCACCGTCGCCGTCAAGCC CGCCGCCTTCGTCGCCCTCGTCTCCCTCCTCCTCGAACCCCTCTTCAGCG CCCACGTCCTCGGAACCACCGCTACCACCGCCGCCGCTGCCGCCGCCGCT ACTACCCGCAACGGGGCCGCCGGTGTGCTCCTCCGTCGCGCCCTGAGCAA GGTTACCGGCGGCCGCAGGAGAGGCACCGCCGCCGCCGGCGCCGCGGCGG CGGCAGCAAAGGCGGCGGTCTCCCGCGCGCGCTGGCTGACGGGGGGCGCC CAGCTGGCACTCTGGGCGGCCGTAGTCCTCGCCTACGCAAACCTGTCGCT ACGGCTCTCCCGCGCCGGCGGCGGGTCCGGCAGGACGGTGGCCGGGTACA TGACGGCCCTGCGCTCCCTCGCCGCCAAGAAGCGTGGCACCGGCGGCTGG GTGAGAATAGACCGGTGGGGAAAAGGTGGGGGCGGGTGGCGCGGGGAGGG GGAGGAAGGAGGCACCGCGCCGAACAGCCCGGTGCCGGGCGGTTGGGGCG GGGGGTGGGGCGGGGGGTGGGGCGTCCGTGACAACTCCAGGCCGCGGGCG CACAGCCTTCTCGGGTCGCTGTACGAGACGCTGATGTCGGGGGGCGGGTG GAGAGGCGGCGGCCGTGTTGATGCACGTGCAATGGCGGTAAGATGGGGGC GTGGATTGTTTTGTTCTGGTGGGCCGTTTGACACTGGGCATGTTTGTTGC CTTCATAAGTACCAGGTATGTGTTTTCTTTTCTGTTGGAGCACGCGTATT TTTTTCTGAAGTTTGTTGTTTTATTTCGTGCCTTGGGGGTGGGACATAAA TGTGAAGATGGCGCTGAGGTGATTTTCGGGGCTGTCCACGCACATGTAGG GAATGGAAAGCTGCTTCATAGACTAATGGATAATGGAGCGAGGTTGTGAA CGTTTGCCACCCTTTGCAGGAATACCGGAACAGTATTTCCAAAATCTTAA CAACATCGGCCTTCATAGCAGAAGGGAGTGAACGAAGTTTCGGCCAAACG TTGAACGCAGGGTGTCCACACAATATTTTTGCTTCTACCTGAATCATCCA CCCGCTCCACCCCCCCCCCACGATCCGGCGAAAACCACAACAGCTGAGTC AGTACCAGACGATGGATGACAACGGACCCCCCTTCGAGAGGGGCGAAGTC ACCGTCCGCAGCATCTACTGCTTCGGCCTGGACGCCGCAATCACCGGCCG CCCCCCGTCCGCGTCCCTCAACAACGGCGGGGCCGGCGCCGGCGCCGATC ACGACGCCGCCGGGGGCGGCGGCGGGATCATCGCGGGCGGCACGTCCCGG CCTTTCTACGTGACCATTACCCTGGGCGGCGTGACCGCCAAGACGTCGCC GCGGCCAGGATTCTCCCCGAGCTTCACCGAGGTGTTCCCGCTCGGATGCG ACTGCCCGATCCGGGGGGCGTTTCTCACGGTCGCTGTTGTCGACAGGTAA ATACGGAGAGCAGTAGTTTTTATGGAGGTGGGAGGAAGGAAGACATGGCA CCTGGAGAAAGCGTTGGATGTAGAACGCAGGAGGAAGGCCTGTTTGCTAG TGGAGATTTCGGGTACCACTTTAGTTATTTGTTGTTGTGGTTTTGTTCTA CAGATCGAGAAGTCTTATGTTCCGCGAAGTGCCGGGTCCACTCCACTCAA CACATGAACGGGGAGGCATCTCATTTTTTGCGCAGGCGTGCGAGAAGCCC TTCGAGAAAACCAGAGAATACATTTCGAATAAACCAGATGAAAAGCTGAG CACCACAACACTCCCACCACGCACCTGACACATCTGTTGCACTTCGTCTA ACCTACCCATCCACCCTCTTGCGCGTCGCCCCACCCCAACCAACGTCCCT GAAAACCCTCGACCAACAAACCAGCTTCGAGACGGGCCGTAGCGTCCGCG GCGACCGCATCGTGGGCGAGGTGCACCTCCCGCTCGACGCCGCGCAACTC GTTCCCGGAACCGGAACGTCTTCCCACGGCGGCGAACCCTCGTACGTCCC TTCAAGCGGCAACGACACCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGGA GCGGTGCCGCGTACCGCCTGAGCGGGGACTGGGAGCTGCAGGGCGCCCTC GGCGGCTCGCTGGGCGGGGCGAGGGTCGGCGCGGACATTGTGATTCACGG GCCCCCTTCGCCCAGTTCCGCCGCGGGGAGGCTGAGGAGGAGGAGGGAGT CGGTTGGGTGGTACGCTCGTTGAAGCATGGCACTCCCGTTTTTCAGCCGG CCTAACCGAGCCGAGACAGCCAAATCAGAGCCGCTGCGGGTGATGAATGC CCACGGGTTGAACGGGAGAACCTCTGGGTTGTTGGAGAGGGGTGACGACT GGTGCTGTTTTTCATTTCCGTCAAAATTTGGGGGGACGTGAGCAAATCAG ATGATACAAGAAGGCCGGGTTTTCCGTTTTTTAATGGATGTTGTTTTCTG TCTGTTTTTGGGGTGGTACTATGGTTGATAGATGGTCCGGGTTGAAGAAA GTAAGGACCTGCGCTTTAAGGACATGATATTGGTCAAAGGCAGGAGGATT TGGCGAAACTTGAACATGGAACTTGGCTATTCAGGGCAGCCCTGGGTCAG GCGTAGACAACGTGCTCCAGTTTGTTGGACTGCGTGGTTTGCAACGACAT GCGCAGATTTGAAGGGACAGAGCGCACGCTCTGCAGAGGGGCAGGGGCTG TTGGCTACCCAGGTTTCACCGGAGTTGGTGTATAAAGTATAGTGTTGCGT ATTGCTGCGTGATGCGCTGTTCCAGTTCCCACGTTGTTCGTTTTGTTTGA GTTGTTGTTGTTGTTGTTGTTGTTGTCTTCACATTAAACTCGTTAAAGTT GCTAATCCCTAAAATCTAGCAAGATCACAGCCCGTGGTCACAAAAGTGCT AGAGCCATCAGAGAATCCTAAAGAACACGCACACTTTTTAGCAGGGAAAG
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Coding sequence (CDS) from alignment at C-linearis_contig96:473803..478802+

>mRNA_C-linearis_contig96.17045.1 ID=mRNA_C-linearis_contig96.17045.1|Name=mRNA_C-linearis_contig96.17045.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=3366bp|location=Sequence derived from alignment at C-linearis_contig96:473803..478802+ (Chordaria linearis ClinC8C monoicous)
ATGGTCCACCACAAGGAAATGGCTCAACTATTGTTGGAATCTGGGGCGCT
GTGGGCGTCCCGGCTGAACGTTCCGTGGTTCCTGGCCGGGGCTGGGCTCG
GCGTACCGGTGGCTGTTGGAGCTGTGTCTACCTGGGACAGCAAGCTTCTG
AGCCTGATGGTCCACCACAAGGAAATGGCTCAACTATTGTTGGAATCTGG
GGCGCTGTGGGCGTCCCGGCTGAACGTTCCGTGGTTCCTGGCCGGGGCTG
GGCTCGGCGTACCGGTGGCTGTTGGAGCTGTGTCTACCTGGGACAGCAAG
CTTCTGAGCCTGGTGACTACCCTGGGAGGTGTTATTGGCGGCGTCGCCGC
TGACCGCCTCTCGACCACGGCCTTGGAGTGACTACCCTGGGAGGTGTTAT
TGGCGGCGTCGCCGCTGACCGCCTCTCGACCACGGCCTTGGACACCCTGG
CGGGCAGCGACTTCAGCTGCTACGACGTGCTGACCAAGGGCGTCGGGCCG
GCCTGCCTCGCGCTCGTCGTGCTCAGCCGCAACATCCGCAGCGAGCCCAC
CGTCGCCGTCAAGCCCGCCGCCTTCGTCGCCCTCGTCTCCCTCCTCCTCG
AACCCCTCTTCAGCGCCCACGTCCTCGGAACCACCGCTACCACCGCCGCC
GCTGCCGCCGCCGCTACTACCCGCAACGGGGCCGCCGGTGTGCTCCTCCG
TCGCGCCCTGAGCAAGGTTACCGGCGGCCGCAGGAGAGGCACCGCCGCCG
CCGGCGCCGCGGCGGCGGCAGCAAAGGCGGCGGTCTCCCGCGCGCGCTGG
CTGACGGGGGGCGCCCAGCTGGCACTCTGGGCGGCCGTAGTCCTCGCCTA
CGCAAACCTGTCGCTACGGCTCTCCCGCGCCGGCGGCGGGTCCGGCAGGA
CGGTGGCCGGGTACATGACGGCCCTGCGCTCCCTCGCCGCCAAGAAGCGT
GGCACCGGCGGCTGGGTGAGAATAGACCGGTGGGGAAAAGGTGGGGGCGG
GTGGCGCGGGGAGGGGGAGGAAGGAGGCACCGCGCCGAACAGCCCGGTGC
CGGGCGGTTGGGGCGGGGGGTGGGGCGGGGGGTGGGGCGTCCGTGACAAC
TCCAGGCCGCGGGCGCACAGCCTTCTCGGGTCGCTGTACGAGACGCTGAT
GTCGGGGGGCGGGTGGAGAGGCGGCGGCCGTGTTGATGCACGTGCAATGG
CGCACCCTGGCGGGCAGCGACTTCAGCTGCTACGACGTGCTGACCAAGGG
CGTCGGGCCGGCCTGCCTCGCGCTCGTCGTGCTCAGCCGCAACATCCGCA
GCGAGCCCACCGTCGCCGTCAAGCCCGCCGCCTTCGTCGCCCTCGTCTCC
CTCCTCCTCGAACCCCTCTTCAGCGCCCACGTCCTCGGAACCACCGCTAC
CACCGCCGCCGCTGCCGCCGCCGCTACTACCCGCAACGGGGCCGCCGGTG
TGCTCCTCCGTCGCGCCCTGAGCAAGGTTACCGGCGGCCGCAGGAGAGGC
ACCGCCGCCGCCGGCGCCGCGGCGGCGGCAGCAAAGGCGGCGGTCTCCCG
CGCGCGCTGGCTGACGGGGGGCGCCCAGCTGGCACTCTGGGCGGCCGTAG
TCCTCGCCTACGCAAACCTGTCGCTACGGCTCTCCCGCGCCGGCGGCGGG
TCCGGCAGGACGGTGGCCGGGTACATGACGGCCCTGCGCTCCCTCGCCGC
CAAGAAGCGTGGCACCGGCGGCTGGGTGAGAATAGACCGGTGGGGAAAAG
GTGGGGGCGGGTGGCGCGGGGAGGGGGAGGAAGGAGGCACCGCGCCGAAC
AGCCCGGTGCCGGGCGGTTGGGGCGGGGGGTGGGGCGGGGGGTGGGGCGT
CCGTGACAACTCCAGGCCGCGGGCGCACAGCCTTCTCGGGTCGCTGTACG
AGACGCTGATGTCGGGGGGCGGGTGGAGAGGCGGCGGCCGTGTTGATGCA
CGTGCAATGGCGCTGAGTCAGTACCAGACGATGGATGACAACGGACCCCC
CTTCGAGAGGGGCGAAGTCACCGTCCGCAGCATCTACTGCTTCGGCCTGG
ACGCCGCAATCACCGGCCGCCCCCCGTCCGCGTCCCTCAACAACGGCGGG
GCCGGCGCCGGCGCCGATCACGACGCCGCCGGGGGCGGCGGCGGGATCAT
CGCGGGCGGCACGTCCCGGCCTTTCTACGTGACCATTACCCTGGGCGGCG
TGACCGCCAAGACGTCGCCGCGGCCAGGATTCTCCCCGAGCTTCACCGAG
GTGTTCCCGCTCGGATGCGACTGCCCGATCCGGGGGGCGTTTCTCACGGT
CGCTGTTGTCGACAGCTGAGTCAGTACCAGACGATGGATGACAACGGACC
CCCCTTCGAGAGGGGCGAAGTCACCGTCCGCAGCATCTACTGCTTCGGCC
TGGACGCCGCAATCACCGGCCGCCCCCCGTCCGCGTCCCTCAACAACGGC
GGGGCCGGCGCCGGCGCCGATCACGACGCCGCCGGGGGCGGCGGCGGGAT
CATCGCGGGCGGCACGTCCCGGCCTTTCTACGTGACCATTACCCTGGGCG
GCGTGACCGCCAAGACGTCGCCGCGGCCAGGATTCTCCCCGAGCTTCACC
GAGGTGTTCCCGCTCGGATGCGACTGCCCGATCCGGGGGGCGTTTCTCAC
GGTCGCTGTTGTCGACAGCTTCGAGACGGGCCGTAGCGTCCGCGGCGACC
GCATCGTGGGCGAGGTGCACCTCCCGCTCGACGCCGCGCAACTCGTTCCC
GGAACCGGAACGTCTTCCCACGGCGGCGAACCCTCGTACGTCCCTTCAAG
CGGCAACGACACCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGGAGCGGTG
CCGCGTACCGCCTGAGCGGGGACTGGGAGCTGCAGGGCGCCCTCGGCGGC
TCGCTGGGCGGGGCGAGGGTCGGCGCGGACATTGTGATTCACGGGCCCCC
TTCGCCCAGTTCCGCCGCGGGGAGGCTGAGGAGGAGGAGGGAGTCGGTTG
GGTGGTACGCTCGTTGACTTCGAGACGGGCCGTAGCGTCCGCGGCGACCG
CATCGTGGGCGAGGTGCACCTCCCGCTCGACGCCGCGCAACTCGTTCCCG
GAACCGGAACGTCTTCCCACGGCGGCGAACCCTCGTACGTCCCTTCAAGC
GGCAACGACACCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGGAGCGGTGC
CGCGTACCGCCTGAGCGGGGACTGGGAGCTGCAGGGCGCCCTCGGCGGCT
CGCTGGGCGGGGCGAGGGTCGGCGCGGACATTGTGATTCACGGGCCCCCT
TCGCCCAGTTCCGCCGCGGGGAGGCTGAGGAGGAGGAGGGAGTCGGTTGG
GTGGTACGCTCGTTGA
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