mRNA_C-linearis_contig96.17028.1 (mRNA) Chordaria linearis ClinC8C monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Homology

BLAST of mRNA_C-linearis_contig96.17028.1 vs. uniprot
Match: D7G481_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G481_ECTSI)

HSP 1 Score: 263 bits (672), Expect = 3.590e-86
Identity = 142/214 (66.36%), Postives = 165/214 (77.10%), Query Frame = 1

Query:    1 PLLWSLIIRQCQLSSLIPVAGLLHHLEGMMGLRVHEVAGLALAGVERVLADARCLSTLTICKCGLAYLPRLQSGSIEILDLSDNKLESASGLEMLFRLKELNLAGNNISTLTDLRPLISLGAGCLRELSLDRNPVKNIPSRYRESVATLLPSIQLLDGVAITRTWRAGKTTDNNTTGGKRGCTILECTTRPRVRDGPVDGYFSDGAACVSRRAG 642
            PLLWSL  RQCQL SL+PVAGLLHHL+G++GL +H + GL LAGVERVLADARCL TLTI  C LA LPRLQSGSIE+LD+S+N +ESA+GLE LFRLKELNLAGN I TL+ LRPL+ LG G LREL+LD NPV+N P RYRESV  + PSIQLLDG+A ++ WR    T  NT G + G     C+T PRVR+   +GYFSDGA   SRRAG
Sbjct:    4 PLLWSLTFRQCQLESLLPVAGLLHHLDGLIGLGIHGIDGLTLAGVERVLADARCLCTLTIRHCRLARLPRLQSGSIEVLDISNNAIESAAGLETLFRLKELNLAGNRIRTLSGLRPLVPLGTGRLRELNLDSNPVQNTP-RYRESVLAVFPSIQLLDGIAKSQKWRMRTATKTNTVG-EEGHDRRACSTPPRVRNAFSEGYFSDGATWNSRRAG 215

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BLAST of mRNA_C-linearis_contig96.17028.1 vs. uniprot
Match: A0A6H5KR55_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KR55_9PHAE)

HSP 1 Score: 258 bits (659), Expect = 5.830e-83
Identity = 139/213 (65.26%), Postives = 164/213 (77.00%), Query Frame = 1

Query:    4 LLWSLIIRQCQLSSLIPVAGLLHHLEGMMGLRVHEVAGLALAGVERVLADARCLSTLTICKCGLAYLPRLQSGSIEILDLSDNKLESASGLEMLFRLKELNLAGNNISTLTDLRPLISLGAGCLRELSLDRNPVKNIPSRYRESVATLLPSIQLLDGVAITRTWRAGKTTDNNTTGGKRGCTILECTTRPRVRDGPVDGYFSDGAACVSRRAG 642
            LLWSL  RQCQL SL+PVAGLLHHL+G++GL +H   GLALAG+ERVLADARCL TLTI  CGLA LPRLQSGSIE+LD S+N +ESA+GLE LFRL+ELNLAGN I TL+DLRPL+ LG G LREL+L+ NPV++ P RYRESV  + PSIQLLDG+A ++ WR    T  N  G + G     C+T PRVR+   +GYFSDGA   SRRAG
Sbjct:   89 LLWSLTFRQCQLESLLPVAGLLHHLDGLIGLGIHGTDGLALAGIERVLADARCLCTLTIRDCGLARLPRLQSGSIEVLDFSNNAIESAAGLETLFRLQELNLAGNRIRTLSDLRPLLPLGTGRLRELNLENNPVQDSP-RYRESVLAVFPSIQLLDGIAKSQKWRMRTATKPNMAG-EEGHNRRACSTPPRVRNAFAEGYFSDGATWNSRRAG 299

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BLAST of mRNA_C-linearis_contig96.17028.1 vs. uniprot
Match: A0A0L0SBP9_ALLM3 (Uncharacterized protein n=2 Tax=Allomyces macrogynus (strain ATCC 38327) TaxID=578462 RepID=A0A0L0SBP9_ALLM3)

HSP 1 Score: 57.0 bits (136), Expect = 6.240e-6
Identity = 56/165 (33.94%), Postives = 81/165 (49.09%), Query Frame = 1

Query:    4 LLWSLIIRQCQLSSLIPVAGLLHHLEGMMG----LRVHEVAGLALAGVERVLADARCLSTLTICKCGLAYLPRLQSGSIEILDLSDNKLESASGLEMLFRLKELNLAGNNISTLTDLRPLISLGAGCLRELSLDRNPVKNIPSRYRESVATLLPSIQLLDGVAIT 486
            L+ SL +R CQL+++ P+A L H  E  +G     R+ ++A L L    RVL DA C +   +       +P      +  L+LS N+L S   +  L R+ EL LA N+++    +  L  L A  L  L L  N        YR  V   +P IQ+LDGVA+T
Sbjct:  576 LVTSLSLRNCQLTTVSPLADLAHLEELFIGGNRLTRIDDLAHLPL----RVL-DASCNAITAV------DVPARAFAKLTHLNLSSNRLTSLDMVRTLPRVTELYLAHNHVTDSGHMNALAVLPA--LHVLDLTGNAFIGAVPHYRAYVIYCVPLIQVLDGVAVT 727

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BLAST of mRNA_C-linearis_contig96.17028.1 vs. uniprot
Match: R7VI33_CAPTE (Uncharacterized protein n=1 Tax=Capitella teleta TaxID=283909 RepID=R7VI33_CAPTE)

HSP 1 Score: 55.5 bits (132), Expect = 1.150e-5
Identity = 42/131 (32.06%), Postives = 67/131 (51.15%), Query Frame = 1

Query:  136 ERVLADARCLSTLTICKCGLAYLPRLQSGSIEILDLSDNKLESASGLEMLFRLKELNLAGNNISTLTDLRPLISLGAGCLRELSLDRNPVKNIPSRYRESVATLLPSIQLLDGVAITRT-------WRAGK 507
            E++L D R LS L              S S+++L+++ N+L+S   L  L  L + ++A N +S + +L   ++      R L L  NPV N  S+YR+ V  + PS+++LDG  IT T       W+A K
Sbjct:  135 EKLLFDPRSLSAL--------------SRSLQVLNVTGNRLDSLQDLFSLTELMQFSVADNQLSDIKELAHFLTSNRHLWR-LDLSGNPVCN-KSKYRDRVIIMSPSLEVLDGKEITDTARQFLTSWQANK 249

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BLAST of mRNA_C-linearis_contig96.17028.1 vs. uniprot
Match: UPI00186483C2 (geranylgeranyl transferase type-2 subunit alpha n=2 Tax=Elopomorpha TaxID=32521 RepID=UPI00186483C2)

HSP 1 Score: 54.3 bits (129), Expect = 4.480e-5
Identity = 34/78 (43.59%), Postives = 48/78 (61.54%), Query Frame = 1

Query:  226 IEILDLSDNKLESASGLEMLFRLKELNLAGNNISTLTDLRPLISLGAGCLRELSLDRNPVKNIPSRYRESVATLLPSI 459
            +E+L++ DN +E+  GL  L RL+EL+L  N IS L++L+PL S     L  L L  NPV   P+   E +A LLPS+
Sbjct:  503 LEVLEVDDNAIETLPGLYHLPRLEELSLRNNQISRLSELKPLSSCPK--LTRLDLRGNPVTQTPNLQSE-LAELLPSV 577

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BLAST of mRNA_C-linearis_contig96.17028.1 vs. uniprot
Match: UPI00106C733E (leucine-rich repeat and guanylate kinase domain-containing protein-like isoform X1 n=2 Tax=Dendronephthya gigantea TaxID=151771 RepID=UPI00106C733E)

HSP 1 Score: 53.9 bits (128), Expect = 6.480e-5
Identity = 33/87 (37.93%), Postives = 54/87 (62.07%), Query Frame = 1

Query:  226 IEILDLSDNKLESASGLEMLFRLKELNLAGNNISTLTDLRPLISLGAGCLRELSLDRNPVKNIPSRYRESVATLLPSIQLLDGVAIT 486
            +++LDLS N + S  GL+    L+E+NL GN I  + ++R +  L    LR+L+  RNP++ + S YR S+   L +++ LDGV +T
Sbjct:  245 LKVLDLSCNYIRSLKGLQEHEFLQEINLEGNQIIDIAEIRYIRELRL--LRKLNFQRNPIQEM-SDYRLSILFRLQTLKNLDGVDVT 328

The following BLAST results are available for this feature:

BLAST of mRNA_C-linearis_contig96.17028.1 vs. uniprot

BLAST of mRNA_C-linearis_contig96.17028.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 6

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POSITION

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Match Name	E-value	Identity	Description
D7G481_ECTSI	3.590e-86	66.36	Hypothetical leucine rich repeat protein n=1 Tax=E...	[more]
A0A6H5KR55_9PHAE	5.830e-83	65.26	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A0L0SBP9_ALLM3	6.240e-6	33.94	Uncharacterized protein n=2 Tax=Allomyces macrogyn...	[more]
R7VI33_CAPTE	1.150e-5	32.06	Uncharacterized protein n=1 Tax=Capitella teleta T...	[more]
UPI00186483C2	4.480e-5	43.59	geranylgeranyl transferase type-2 subunit alpha n=...	[more]
UPI00106C733E	6.480e-5	37.93	leucine-rich repeat and guanylate kinase domain-co...	[more]