mRNA_C-linearis_contig96.17020.1 (mRNA) Chordaria linearis ClinC8C monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-linearis_contig96.17020.1

>prot_C-linearis_contig96.17020.1 ID=prot_C-linearis_contig96.17020.1|Name=mRNA_C-linearis_contig96.17020.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=480bp
MFQKLTTDGYLGGERAVSLLGKSGLSQQTLARVWALADGDADGRLSVKEF
CAAMHLIGCVRKGEPLPELPKRTSENKLKKARTRHPPAAAVKPKGAERIK
GQIEPAKLSKRRSRLASLVESPDGDGPRTAIPESNESAIEEERIQGPVNE
KRETPAGGMIVGNGAIRAPDEYFQTSQTSAVESRDHGAPDRKRRPNLRQL
DAKDVDAVFAEDLGAINSLRDVQSWRVLVMGLQRLSAKDMSRRVQVKARP
QRRHTLPLATKGELVHKQEFLPGRGRRISLFGTAYDPAALFLKKRAERGS
TREVELEKDVAKAAAKWNLKPLVESAHRGANGATDAERGDGSRGNLSVAG
LPLLDEDIDVIAHLLRQNHAFNKLDLSRCFLSETQFVSLAQALAWNSRVQ
ELHLQECVFTDVGTAALADVLAVNNHIDSIDVRGCKGLDEKGIRQILTAA
RKKANLLKFNGMELATLRAESSDELDLSG*
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mRNA from alignment at C-linearis_contig96:87776..91190-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-linearis_contig96.17020.1 ID=mRNA_C-linearis_contig96.17020.1|Name=mRNA_C-linearis_contig96.17020.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=3415bp|location=Sequence derived from alignment at C-linearis_contig96:87776..91190- (Chordaria linearis ClinC8C monoicous)
GAGCACACAAAATACAAAGAGATGTTTCAAAAACTTACCACCGATGGGTA TCTTGGTGGCGAACGAGCCGTGTCTCTACTGGGGAAGTCCGGCCTCTCCC AGCAAACACTCGCGCGAGTGTGGGCCCTGGCAGACGGCGATGCCGATGGG AGGTTAAGCGTGAAGGTGTGGTCTAGACTTAGACTGTGTTCTTGTGGACG ACACGTTGCAAAGAAGTTGGCTCGGGTCTCTGTGAGAACACTACACTAGT CAATTCAAGAGCCGTGCCATTATACTTCACCGAGCATACGCACCTGTGCC TTTGTCGTCGCGTCCTCTGTTTTGTACAGCTGATGCAAACCTAAAACCTG CTTCACGATTCTTTCCAATCAATGGTGGCATGTAGGAATTTTGCGCGGCG ATGCATCTTATCGGATGCGTCCGCAAGGGAGAGCCGCTTCCAGAACTACC GAAGAGGACTTCCGAGAACAAGTTGAAAAAGGCAAGGACACGGCATCCCC CTGCTGCTGCTGTGAAGCCGAAAGGGGCCGAGAGAATAAAGGGCCAAATC GAACCAGCCAAGTTATCAAAGCGACGATCCCGATTAGCGTCGCTGGTGGA AAGTCCAGACGGTGATGGGCCACGTACTGCCATCCCGGAATCCAACGAGT CCGCCATTGAAGAGGTAATCCTTAGCTAAGAATTTATCTGCCAATAGAGT ATTGCAGTGGCAACATGTAGTTCTTTTGAGATATTTTTTTCCCGGGGTAA GGAACAGAGAGCGCGCGTTCTGTACGTCCTCCGGAAAATTGATCGCAGAT TTCCGTCTGCGGGCGGTGAGACTCAGTGCATCTCGATCTCAATTCATGAG ACCGGCCTTGAAACGTCTTGTCGTCGCGTCCCCTCACGCATACCGATGAA TCAGCCCAGTGATTTTATTTTAAAAGCTTTTAAACGTGCCTCTTTGCACC TCGGTGTTACAGCACTTTTAAACTTGCTTCTTCGCGCCACCATGGCAATC GTGCGACCGTTGCCGTTTAAATAAAGGATGGTCCCTATAATATATAACGA AGCGTCTGTGAAACCTGATGTCCGCCACCTGAACCAACCAGGAGCGCATA CAGGGACCAGTCAACGAAAAGAGGGAAACTCCTGCCGGAGGCATGATTGT GGGGAACGGCGCAATACGGGCTCCAGATGAATATTTCCAAACCAGCCAAA CTAGTGCAGTAGAGAGTCGGGATCATGGAGCGCCGGATCGTAAGCGTCGA CCAAACCTTCGCCAGCTGGACGCCAAAGACGTCGACGCAGTATTCGCAGA GGATCTAGGAGCAATCAACTCCCTCCGTGACGTGCAGGTGCATCGCTGCT TTACTTCTTATGGCCCTTAGATCCTCTCTATGCCGAACCTGTCGCGCGTT CTGACTGTAGCTTGGTTCCCGGAAACCACCTTCCGTGCTTCTCTTCCAGC TCATGGTCAGCCTCGTTCACGTACTTCTTCGATGCAATTTTCTCTGCAGA GTTGGCGCGTCCTCGTCATGGGTCTCCAAAGGCTGTCGGCGAAGGACATG TCGCGTCGTGTACAGGTACGTGGACCTGTCGTAGCGCTTTCGTTTGTTCG AGCTTTGAAATACAGACGGGATATGCAGGCAACGTATAGACGCGCCTCCG CTGTACCTTAGAATGCTCGATAGTTGGTCTCGCGGACGGTCTGTGTACCA CTACGCTTCGTGATCACCCTGCCCGGCCCTGCACTTGCTCTGAAAACTAC TCACTGCTTTTCTGAAGGTGAAAGCGCGACCTCAACGACGACATACCTTA CCACTAGCCACAAAAGGAGAGCTTGTGCACAAGCAGGAGTTTTTGCCAGG CAGGGGCCGCAGAATAAGTCTATTTGGGACTGCCTACGACCCGGCTGCGT TGTTTCTCAAGTGAGACCAAAGTAGCGACAACGTAGCCCTACACCCAAAT AGAATGTATGCGACGATCATTGCAGTGCGTGGATCTAGGTCTGCACGCCC CGCCCCCTCTCTGTATTCAGAGCTTGCTCTGTCGGCCGGGCCAAGACAAA TTCGGTGTACGCTACTTGCGTGTTCGAAGGCGCACGTTTCTTAGGAAATT GGCAAGGTTGTTGGCGTGAACTGTCGGCAGGAAGCGAGCGGAGAGAGGAA GTACTCGCGAGGTGGAACTTGAAAAGGACGTCGCAAAGGCAGCTGCAAAA TGGAACCTTAAACCCTTGGTAGAGAGCGCTCACAGGTGAGAGGTGGTTAC CCAGGCGCTGTTGGAATAGCCCGGAGTCCTTGCGATGTTGGTTGCACTTG ATCGCAAAAGCATTGCAGTGAACAGAACATGATGAAGGATACTGTTGACT CATGCAATCGATGAACCAACGTGAAAAGGGGCGCAAATGGGGCTACCGAC GCCGAACGAGGAGATGGATCCAGAGGCAACCTTAGTGTTGCTGGGCTGCC ACTACTAGACGAGGATATTGACGTCATCGCCCATGTGAGCAAATCCTGTA GCGCAGTTTTGCCGCTTGTGTCGTGCCCTTTACTTGTCGTTTAGTTTGTG GCCCTATTAATAGTTGAATGCCACAAAGAAACAACAGCGTAGGAAGGTTA AGGTTCTCAGCTGCCTACCACGAATGTGACGGGTCCCCATCCCTTTTTCT GGCAACCTGTTCCATGCTCCAGCTGCTCAGGCAAAATCATGCCTTCAACA AACTGGACCTGAGCAGATGCTTCTTGTCAGAAACGCAGTTTGTGTCACTG GCGCAAGCTTTGGCGTGGAACTCTCGAGTACAAGAGGTGAGTTTAGACGC AAAGTTGAACATGTGGCGAGAAGAGAAGTCGCCAGTTACAAGTGACGTAG ATGTACTGCTGTAGTCATCCGAAGCGCGATGCCTCCCAGTACAAACGCGG TGATACAACCCCCCTGACGCTGCTCTAAACCCTTTCGAACGAAAACTTGC AGCTACACCTCCAAGAATGCGTCTTCACAGATGTGGGTACCGCGGCCCTA GCGGACGTTCTGGCCGTGAACAACCACATCGATTCTATCGACGTCAGAGG CTGTAAAGGTGGGTGTTTTCTTGAACCTTCACTTGTGAGAACATTTCTTA GGTTTGCTTGCCCATCCCAACAAAGTGCCGCGGGCGACTCGAGCATGTAA TACAGAATGACAATTGGTCAACGTGTCAGCATTCTACGGCAGCGCTACCA AGGAATACCATCTCGCCGGGTAATGTTTTGCTTTCGATAACCGCTGGCTT GCTGTGCCTTGCCATTCCTTCCTCCATTCTTGAGGCCTGGACGAGAAAGG AATACGGCAAATCCTCACGGCTGCCCGAAAAAAGGCAAACCTGTTGAAGT TCAACGGAATGGAGCTGGCTACCTTGCGTGCGGAAAGCTCGGACGAGCTG GACTTGAGCGGGTGA
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Coding sequence (CDS) from alignment at C-linearis_contig96:87776..91190-

>mRNA_C-linearis_contig96.17020.1 ID=mRNA_C-linearis_contig96.17020.1|Name=mRNA_C-linearis_contig96.17020.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=2880bp|location=Sequence derived from alignment at C-linearis_contig96:87776..91190- (Chordaria linearis ClinC8C monoicous)
ATGTTTCAAAAACTTACCACCGATGGGTATCTTGGTGGCGAACGAGCCGT
GTCTCTACTGGGGAAGTCCGGCCTCTCCCAGCAAACACTCGCGCGAGTGT
GGGCCCTGGCAGACGGCGATGCCGATGGGAGGTTAAGCGTGAAGATGTTT
CAAAAACTTACCACCGATGGGTATCTTGGTGGCGAACGAGCCGTGTCTCT
ACTGGGGAAGTCCGGCCTCTCCCAGCAAACACTCGCGCGAGTGTGGGCCC
TGGCAGACGGCGATGCCGATGGGAGGTTAAGCGTGAAGGAATTTTGCGCG
GCGATGCATCTTATCGGATGCGTCCGCAAGGGAGAGCCGCTTCCAGAACT
ACCGAAGAGGACTTCCGAGAACAAGTTGAAAAAGGCAAGGACACGGCATC
CCCCTGCTGCTGCTGTGAAGCCGAAAGGGGCCGAGAGAATAAAGGGCCAA
ATCGAACCAGCCAAGTTATCAAAGCGACGATCCCGATTAGCGTCGCTGGT
GGAAAGTCCAGACGGTGATGGGCCACGTACTGCCATCCCGGAATCCAACG
AGTCCGCCATTGAAGAGGAATTTTGCGCGGCGATGCATCTTATCGGATGC
GTCCGCAAGGGAGAGCCGCTTCCAGAACTACCGAAGAGGACTTCCGAGAA
CAAGTTGAAAAAGGCAAGGACACGGCATCCCCCTGCTGCTGCTGTGAAGC
CGAAAGGGGCCGAGAGAATAAAGGGCCAAATCGAACCAGCCAAGTTATCA
AAGCGACGATCCCGATTAGCGTCGCTGGTGGAAAGTCCAGACGGTGATGG
GCCACGTACTGCCATCCCGGAATCCAACGAGTCCGCCATTGAAGAGGAGC
GCATACAGGGACCAGTCAACGAAAAGAGGGAAACTCCTGCCGGAGGCATG
ATTGTGGGGAACGGCGCAATACGGGCTCCAGATGAATATTTCCAAACCAG
CCAAACTAGTGCAGTAGAGAGTCGGGATCATGGAGCGCCGGATCGTAAGC
GTCGACCAAACCTTCGCCAGCTGGACGCCAAAGACGTCGACGCAGTATTC
GCAGAGGATCTAGGAGCAATCAACTCCCTCCGTGACGTGCAGGAGCGCAT
ACAGGGACCAGTCAACGAAAAGAGGGAAACTCCTGCCGGAGGCATGATTG
TGGGGAACGGCGCAATACGGGCTCCAGATGAATATTTCCAAACCAGCCAA
ACTAGTGCAGTAGAGAGTCGGGATCATGGAGCGCCGGATCGTAAGCGTCG
ACCAAACCTTCGCCAGCTGGACGCCAAAGACGTCGACGCAGTATTCGCAG
AGGATCTAGGAGCAATCAACTCCCTCCGTGACGTGCAGAGTTGGCGCGTC
CTCGTCATGGGTCTCCAAAGGCTGTCGGCGAAGGACATGTCGCGTCGTGT
ACAGAGTTGGCGCGTCCTCGTCATGGGTCTCCAAAGGCTGTCGGCGAAGG
ACATGTCGCGTCGTGTACAGGTGAAAGCGCGACCTCAACGACGACATACC
TTACCACTAGCCACAAAAGGAGAGCTTGTGCACAAGCAGGAGTTTTTGCC
AGGCAGGGGCCGCAGAATAAGTCTATTTGGGACTGCCTACGACCCGGCTG
CGTTGTTTCTCAAGTGAAAGCGCGACCTCAACGACGACATACCTTACCAC
TAGCCACAAAAGGAGAGCTTGTGCACAAGCAGGAGTTTTTGCCAGGCAGG
GGCCGCAGAATAAGTCTATTTGGGACTGCCTACGACCCGGCTGCGTTGTT
TCTCAAGAAGCGAGCGGAGAGAGGAAGTACTCGCGAGGTGGAACTTGAAA
AGGACGTCGCAAAGGCAGCTGCAAAATGGAACCTTAAACCCTTGGTAGAG
AGCGCTCACAGGAAGCGAGCGGAGAGAGGAAGTACTCGCGAGGTGGAACT
TGAAAAGGACGTCGCAAAGGCAGCTGCAAAATGGAACCTTAAACCCTTGG
TAGAGAGCGCTCACAGGGGCGCAAATGGGGCTACCGACGCCGAACGAGGA
GATGGATCCAGAGGCAACCTTAGTGTTGCTGGGCTGCCACTACTAGACGA
GGATATTGACGTCATCGCCCATGGGCGCAAATGGGGCTACCGACGCCGAA
CGAGGAGATGGATCCAGAGGCAACCTTAGTGTTGCTGGGCTGCCACTACT
AGACGAGGATATTGACGTCATCGCCCATCTGCTCAGGCAAAATCATGCCT
TCAACAAACTGGACCTGAGCAGATGCTTCTTGTCAGAAACGCAGTTTGTG
TCACTGGCGCAAGCTTTGGCGTGGAACTCTCGAGTACAAGAGCTGCTCAG
GCAAAATCATGCCTTCAACAAACTGGACCTGAGCAGATGCTTCTTGTCAG
AAACGCAGTTTGTGTCACTGGCGCAAGCTTTGGCGTGGAACTCTCGAGTA
CAAGAGCTACACCTCCAAGAATGCGTCTTCACAGATGTGGGTACCGCGGC
CCTAGCGGACGTTCTGGCCGTGAACAACCACATCGATTCTATCGACGTCA
GAGGCTGTAAAGCTACACCTCCAAGAATGCGTCTTCACAGATGTGGGTAC
CGCGGCCCTAGCGGACGTTCTGGCCGTGAACAACCACATCGATTCTATCG
ACGTCAGAGGCTGTAAAGGCCTGGACGAGAAAGGAATACGGCAAATCCTC
ACGGCTGCCCGAAAAAAGGCAAACCTGTTGAAGTTCAACGGAATGGAGCT
GGCTACCTTGCGTGCGGAAAGCTCGGACGAGCTGGACTTGAGCGGGTGAG
CCTGGACGAGAAAGGAATACGGCAAATCCTCACGGCTGCCCGAAAAAAGG
CAAACCTGTTGAAGTTCAACGGAATGGAGCTGGCTACCTTGCGTGCGGAA
AGCTCGGACGAGCTGGACTTGAGCGGGTGA
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