mRNA_C-linearis_contig96.17010.1 (mRNA) Chordaria linearis ClinC8C monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Homology

BLAST of mRNA_C-linearis_contig96.17010.1 vs. uniprot
Match: A0A6H5KFB9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFB9_9PHAE)

HSP 1 Score: 188 bits (477), Expect = 6.750e-47
Identity = 89/153 (58.17%), Postives = 117/153 (76.47%), Query Frame = 3

Query:  159 AVDEVVTNFAAALTRAVITNNTLELANGTVFIGHREMGSKLFIRSCYKDLSKIVIDGAINGSMDNIVVTGTPGIGKSVFGYYLLYLLRLEGKTVVFEQKEKWYRFSDEGVVQGRFETFSDAGFLNDPAGWYLSDPEGKPREGFTGITVVLVSP 617
            AV + + +F A LT+AV+ +NTLELA+GT F+G   + SKLFIR CYKDLS+++++G  +G+MD IVVTGTPGIGKS FG+YL+YLLR +G TVV E+K+ W+RFSDEGV  G F +F  AG+L   + WYLSDPE +P+E     TVVL+SP
Sbjct:   35 AVPKALADFGAVLTKAVVADNTLELADGTFFLGEPRLRSKLFIRPCYKDLSELILEGVTDGTMDKIVVTGTPGIGKSEFGFYLMYLLRGQGNTVVLERKDSWFRFSDEGVTVGYFYSFRRAGYLYGNSTWYLSDPEDRPKELLGLPTVVLLSP 187

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BLAST of mRNA_C-linearis_contig96.17010.1 vs. uniprot
Match: A0A6H5KCR9_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCR9_9PHAE)

HSP 1 Score: 147 bits (371), Expect = 2.300e-37
Identity = 69/115 (60.00%), Postives = 90/115 (78.26%), Query Frame = 3

Query:  159 AVDEVVTNFAAALTRAVITNNTLELANGTVFIGHREMGSKLFIRSCYKDLSKIVIDGAINGSMDNIVVTGTPGIGKSVFGYYLLYLLRLEGKTVVFEQKEKWYRFSDEGVVQGRF 503
            AV + + +F A LT+AV+ +NTLELA+GT F+G   + SKLFIR CYKDLS+++++G  +G+MD IVVTGTPGIGKS FG+YL+YLLR +G TVV E+K  W+RFSD GV  G F
Sbjct:   16 AVPKALADFGAVLTKAVVADNTLELADGTFFLGEPRLRSKLFIRPCYKDLSELILEGVTDGTMDKIVVTGTPGIGKSEFGFYLMYLLRGQGNTVVLERKGCWFRFSDGGVTVGDF 130

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BLAST of mRNA_C-linearis_contig96.17010.1 vs. uniprot
Match: D7G8Q1_ECTSI (Uncharacterized protein n=3 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8Q1_ECTSI)

HSP 1 Score: 135 bits (339), Expect = 6.250e-32
Identity = 65/101 (64.36%), Postives = 84/101 (83.17%), Query Frame = 3

Query:  114 DRLSRIEQLRANNAPAVDEVVTNFAAALTRAVITNNTLELANGTVFIGHREMGSKLFIRSCYKDLSKIVIDGAINGSMDNIVVTGTPGIGKSVFGYYLLYL 416
            DR SRIEQLRANNAPA ++ V++FAAALT AV+T +TLELANGT F+G+ ++GSKLFIR CYK+++ +++ G +     ++VVTGTPGIGKS FGYYLLYL
Sbjct:  123 DRFSRIEQLRANNAPAANKNVSDFAAALTGAVVTEDTLELANGTFFLGNSDLGSKLFIRHCYKEMADLILSGKVQ----DVVVTGTPGIGKSTFGYYLLYL 219

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BLAST of mRNA_C-linearis_contig96.17010.1 vs. uniprot
Match: D8LKS5_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKS5_ECTSI)

HSP 1 Score: 147 bits (371), Expect = 8.020e-32
Identity = 83/158 (52.53%), Postives = 110/158 (69.62%), Query Frame = 3

Query: 3390 SLWILRVAVGTVSNVDLPLNQVLDAAVKATGAVVLDGMGTEVPNSAHNDPVPMFAEGATVEQKQRFKDLQGTAYKFLCDFMQEAEPSTPRRLSGCLPCCRPITRPTDLTPRVNWKDSMVQVRSRN-GRWAWVLKKNEQAHCRENGDAASAQSARPPIS 3860
            SLW+LRVAVG VSNVDLPLN+VL A V ATGA +L+G+G +VP+   +  +P+F+EGAT  +   FKDL+G +Y+ LC FM++ E S P+ LSGCLPC R +         V+W+D MVQVR+ + GR AWVLK NE+A  RE+G A +   A  P+S
Sbjct: 1019 SLWMLRVAVGAVSNVDLPLNKVLGAFVMATGAELLEGVG-KVPDRISSAALPVFSEGATRAEMDGFKDLRGKSYEGLCKFMRDVESSPPQCLSGCLPCHRTLAV-------VDWRDHMVQVRNPSTGRRAWVLKTNEKAFLREHGGAPATAGA--PVS 1166

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BLAST of mRNA_C-linearis_contig96.17010.1 vs. uniprot
Match: A0A6H5K1J0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1J0_9PHAE)

HSP 1 Score: 103 bits (256), Expect = 2.360e-20
Identity = 55/108 (50.93%), Postives = 72/108 (66.67%), Query Frame = 3

Query:  168 EVVTNFAAALTRAVITNNTLELANGTVFIGHREMGSKLFIRSCYKDLSKIVIDGAI---NGSMDNIVVTGTPGIGKSVFGYYLLYLLRLEGKTVVFEQKEKWYRFSDE 482
            EV  +F AALT A +T NTL LANGT F+G     SK+F+R CY +  +++   A    +G+   IV+ GT GIGKSVFG++LLY LRLEG+TVVFE++     FS E
Sbjct:   57 EVSCDFGAALTGAALTENTLTLANGTFFLGKSACRSKIFVRHCYNETFQLIRKSAAQRNDGTTPKIVIVGTSGIGKSVFGFFLLYQLRLEGRTVVFERETVPRAFSFE 164

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BLAST of mRNA_C-linearis_contig96.17010.1 vs. uniprot
Match: A0A836CIP4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CIP4_9STRA)

HSP 1 Score: 105 bits (262), Expect = 1.610e-19
Identity = 56/147 (38.10%), Postives = 85/147 (57.82%), Query Frame = 3

Query:  174 VTNFAAALTRAVITNNTLELANGTVFIGHREMGSKLFIRSCYKDLSKIVIDGAINGSMDNIVVTGTPGIGKSVFGYYLLYLLRLEGKTVVFEQKEKWYRFSDEGVVQGRFETFSDAGFLNDPAGWYLSDPEGKPREGFTGITVVLVS 614
            +  F  AL+ A   +  L L +GT F+G    G+ +++RSCY+DL++ +      G+   +VVTGTPGIGKSV+ +Y L+ L   GKTVV++    +YRF  + V QG    F  AG+L D    +L DP+ +    F G+T+  +S
Sbjct:  150 IVEFWHALSEATEEDGWLILVDGTFFMGDPTRGTCIYVRSCYRDLTEHIEQLLAIGTR-RVVVTGTPGIGKSVYAFYWLWRLCQAGKTVVYQSDNDFYRFCGQDVRQGNRSEFFRAGYLQDANAGFLCDPDMELYSCFQGVTIAFMS 295

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BLAST of mRNA_C-linearis_contig96.17010.1 vs. uniprot
Match: A0A835Z6Q5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6Q5_9STRA)

HSP 1 Score: 104 bits (260), Expect = 3.090e-19
Identity = 65/171 (38.01%), Postives = 94/171 (54.97%), Query Frame = 3

Query:  114 DRLSRIEQLRANNAPAVDEVVTNFAAALTRAVITNNTLELANGTVFIGHREMGSKLFIRSCYKDLSKIVIDGAINGSMDNIVVTGTPGIGKSVFGYYLLYLLRLEGKTVVFEQKEKWYRFSDEGVVQG-RFETFSDAGFLNDPAGWYLSDP--EGKPREGFTGITVVLVSP 617
            D  +R++ +          VVT F  AL+RA   ++ L L +GT F+G    G++++IRSCY++L    I   +      +V+TGTPGIGKS +  Y L+ LR  G TVV++    +YRFS E V        F +AG L  P  W+L DP  + +P  G  G+T+V VSP
Sbjct:   64 DEKTRLQGILGTLTSQRSSVVT-FWRALSRASDDDDCLALKDGTWFMGDYVRGNRIYIRSCYRELMD-TIKAMVTSGTRRVVITGTPGIGKSCYALYWLWHLRRAGNTVVYQIGADFYRFSGELVQHADTIGAFKNAGGLWHPDVWFLCDPARDHEPYGGCLGVTLVFVSP 232

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BLAST of mRNA_C-linearis_contig96.17010.1 vs. uniprot
Match: A0A836CEN6_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CEN6_9STRA)

HSP 1 Score: 101 bits (252), Expect = 5.380e-19
Identity = 56/146 (38.36%), Postives = 84/146 (57.53%), Query Frame = 3

Query:  183 FAAALTRAVI-TNNTLELANGTVFIGHREMGSKLFIRSCYKDLSKIVIDGAINGSMDNIVVTGTPGIGKSVFGYYLLYLLRLEGKTVVFEQKEKWYRFSDEGVVQGRFETFSDAGFLNDPAGWYLSDPEGKPREGFTGITVVLVSP 617
            F  AL+ A +  +  L+L  GT F+G+R+ GS ++IR CY +L + +        +  +V+TGTPGIGK+ + +Y L+ LR  G+TVV++    WYRF     VQG  + F  AG+L+DPA    +         F GIT+V V+P
Sbjct:    1 FWRALSSASVDADGCLKLPAGTWFMGNRDFGSAIYIRDCYCNLMEQINKLVAARRVQRVVITGTPGIGKTCYAFYWLWHLRQTGRTVVYQLGPGWYRFCGATAVQGSRKAFLAAGYLDDPA----AXXXXXXXXXFGGITLVFVTP 142

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BLAST of mRNA_C-linearis_contig96.17010.1 vs. uniprot
Match: A0A836CG71_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CG71_9STRA)

HSP 1 Score: 102 bits (255), Expect = 3.120e-18
Identity = 57/137 (41.61%), Postives = 80/137 (58.39%), Query Frame = 3

Query:  225 LELANGTVFIGHREMGSK-LFIRSCYKDLSKIVIDGAINGSMD--NIVVTGTPGIGKSVFGYYLLYLLRLEGKTVVFEQKEKWYRFSDEGVVQGRFETFSDAGFLNDPAGWYLSDPE---GKPREGFTGITVVLVSP 617
            L L  GT F G++    K +++R  YKDL + V+     G      I++TG PG GKS+F  Y L+LL+L GKTV+++  + +YRFS + V +G    F+D GF +DP  WYLSDP    G P     GIT+  +SP
Sbjct:  220 LRLTEGTHFPGNKNQRVKAIYVRQWYKDLQEEVLSMTEPGPQHARKILITGRPGTGKSLFALYWLWLLKLAGKTVIYQANKWFYRFSGDTVWRGSERHFADMGFFDDPDCWYLSDPPAPAGTPWLDCEGITLAFMSP 356

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BLAST of mRNA_C-linearis_contig96.17010.1 vs. uniprot
Match: A0A2Z6SBH9_9GLOM (Crinkler (CRN) family protein, putative n=1 Tax=Rhizophagus clarus TaxID=94130 RepID=A0A2Z6SBH9_9GLOM)

HSP 1 Score: 98.2 bits (243), Expect = 5.010e-17
Identity = 62/173 (35.84%), Postives = 87/173 (50.29%), Query Frame = 3

Query:  117 RLSRIEQLRA-------NNAPAVDEVVTNFAAALTRAVITNNTLELANGTVFIGHREMGSKLFIRSCYKDLSKIVIDGAINGSMDNIVVTGTPGIGKSVFGYYLLYLLRLEGKTVVFEQKEKWYRFSDEGVVQGRFETFSDAGFLNDPAGWYLSDPEGKPREGFTGITVVLVS 614
            +L+ +E+L         N     D+ V NF   L +A +TN  L L N T F+G     S L+IR CYKD   IV D AIN     + ++G PGIGK++FGYYLLYLL  +  T+VF+  ++   F   G    R        +L D   WY+ D  GK  +     T+++ S
Sbjct:  107 KLTSLEELNGSEFHEPPNKRVKTDDEVNNFWRDLKKASLTNQFLRLPNNTRFLGKEHGLSNLYIRRCYKDFEHIVFDDAIN----KLRISGNPGIGKTIFGYYLLYLLAKKNATIVFDSCKEKKSFVFNGEHAFRCNDDEIDLYLLDARVWYIVD--GKEPKDVNAKTILICS 273

The following BLAST results are available for this feature:

BLAST of mRNA_C-linearis_contig96.17010.1 vs. uniprot

BLAST of mRNA_C-linearis_contig96.17010.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25

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POSITION

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Match Name	E-value	Identity	Description
A0A6H5KFB9_9PHAE	6.750e-47	58.17	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5KCR9_9PHAE	2.300e-37	60.00	Uncharacterized protein (Fragment) n=1 Tax=Ectocar...	[more]
D7G8Q1_ECTSI	6.250e-32	64.36	Uncharacterized protein n=3 Tax=Ectocarpus silicul...	[more]
D8LKS5_ECTSI	8.020e-32	52.53	LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus s...	[more]
A0A6H5K1J0_9PHAE	2.360e-20	50.93	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A836CIP4_9STRA	1.610e-19	38.10	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A835Z6Q5_9STRA	3.090e-19	38.01	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A836CEN6_9STRA	5.380e-19	38.36	Uncharacterized protein (Fragment) n=1 Tax=Tribone...	[more]
A0A836CG71_9STRA	3.120e-18	41.61	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A2Z6SBH9_9GLOM	5.010e-17	35.84	Crinkler (CRN) family protein, putative n=1 Tax=Rh...	[more]

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