prot_C-linearis_contig96.17010.1 (polypeptide) Chordaria linearis ClinC8C monoicous
You are viewing a polypeptide, more information available on the corresponding mRNA page
Overview
Homology
BLAST of mRNA_C-linearis_contig96.17010.1 vs. uniprot
Match: A0A6H5KFB9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFB9_9PHAE) HSP 1 Score: 165 bits (417), Expect = 4.080e-43 Identity = 115/302 (38.08%), Postives = 160/302 (52.98%), Query Frame = 0 Query: 1 MPVWSEDELLECRRIIFPDARSVNDVRKAFEKVGGVARAVFRPRRFARQVGKMERATSQVNLGLLRQVCAVEQNEF--LSTDKTGDALFHMLPSPGTAYECFDVVFASEYALELVEKAVSEREYLDFQGHVMATLEHADLNSKVGGSARGQMFERLAHAALTRSVRLKNPTAFNMTILS---NSGKDVLGDGELSLNFTRIKEIGGEAFPRTSLRRGTYYRPTSQTFPAVDSFFVDRSTGTLYFFQMKSAGV-----EVIETGASLEKFWKTASKSKSIT---KCVLVCVVPSIN-WQKAVD 288 MP W DEL CR+ +FP DVR+ F KVGGVARAVF + + KM+ A S ++L LL+Q+ + +++ +STD++GDAL H+LP P T +E F V FASE+A + + ++E+ V A H +L KV R FE +AH + + F+M ILS +S K VL L L+F + + G +FP +L GTYYRP S F A DSF VD + TL+FFQ+KSAG+ E +EK+W+ A + V VVP W KA + Sbjct: 206 MPPWCLDELFRCRQAVFPHVPET-DVRERFSKVGGVARAVFDAEKLKQVCLKMQAAASNMDLNLLQQILSRSRDDVDQVSTDRSGDALLHLLPIPETGFEEFSVDFASEFAHIVTLGELPKKEFAPLASFVGAAFAHDELGDKVTAE-RAAGFETIAHKTIGGA---SEQQWFDMRILSRASSSTKSVLEGNRLRLSFVKEQSFEGNSFP-DALVAGTYYRPGSPNFAAADSFGVDSGSKTLWFFQVKSAGLPPKEGEKAVKWTHVEKYWRRAKLHHGAPIKKRFVYAFVVPEGKVWNKATE 501
BLAST of mRNA_C-linearis_contig96.17010.1 vs. uniprot
Match: M4C004_HYAAE (RxLR effector candidate protein n=3 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4C004_HYAAE) HSP 1 Score: 57.4 bits (137), Expect = 1.810e-5 Identity = 69/249 (27.71%), Postives = 103/249 (41.37%), Query Frame = 0 Query: 1 MPVWSEDELLECRRIIFPDARSVNDVRKAFEKVGGVARAVFRPRRFARQVGKMERATSQVNLGLLRQVCAVEQNEFLSTDKT--GDALFHMLPSPGTAYECFDVVFASEYALELVEKAVSEREYLDFQGHVMATLEHADLNSKVGGSA--RGQMFERLAHAALTRSVRLKNPTAFNMTILSNSGKDVLGDGELSLN-FTRIKEIGGEAFPRTSLRRG-----------------TYYRPTSQTFPAVDS 227 MPVW+E E+L+CR +++ D R + V + + K GG+AR V R RQ + A ++VNL + V N +S + H+L E + VFAS + L +V V + + +G ++A L SK+ A G +FE H+ L R F + L+ K GE + TR+ I E LR TY RP S F +VD+ Sbjct: 312 MPVWTEQEILQCRDLMYSD-RPLGRVMECYRKWGGIARYVLRFAMVERQQSLLGEAINEVNLEAI-----VNSNGQMSAKDIMISHRVLHILVEDDFNNEGY--VFASRHVLNMVYNKV----FAENRGRLLAFLSSC---SKIDSFAVVYGLLFETYVHSILPRG------GTFRVRRLTEGSKKKAAGGEKGESKITRV--ITDEDVEEVVLRERKATVFEGNIRVAADDPPTYLRPASGNFESVDA 537
BLAST of mRNA_C-linearis_contig96.17010.1 vs. uniprot
Match: W4FCC5_9STRA (Crinkler domain-containing protein n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FCC5_9STRA) HSP 1 Score: 55.8 bits (133), Expect = 5.780e-5 Identity = 52/168 (30.95%), Postives = 73/168 (43.45%), Query Frame = 0 Query: 1 MPVWSEDELLECRRIIFPDARSVNDVRKAFEKVGGVARAVFRPRRFARQVGKMERATSQVNLGLLRQVCAVEQNEFLSTDKTGDALFHMLPSPGTAYECFD--VVFASEYALELVEKAVSEREYLDFQGHVMATLEHADLNSKVGGSARGQMFERLAHAALTRSVRLK 166 MPVW+ DE+L CR++++PD VN V F + GGV R V +ERA VN C N D +A +L + VVFAS Y ++V + + + ++ D +A E D G RG +FER HA L R R + Sbjct: 309 MPVWTLDEILSCRKLLYPDL-DVNMVTDCFHRWGGVPRYVLENMLRDTHQSLLERALGMVN-------CDWVVNAIGELDAMFEASHRLLHYDVNEKTFINKHVVFASPYVQDVVYRRLCKDDH-DKLVKFLAASEGIDQL----GVVRGIVFERYVHAVLPRGGRFR 463 The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig96.17010.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 3 ZOOMx 1POSITION0
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29 ZOOMx 1POSITION0
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_C-linearis_contig96.17010.1 ID=prot_C-linearis_contig96.17010.1|Name=mRNA_C-linearis_contig96.17010.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=323bpback to top |