mRNA_C-linearis_contig90.16790.1 (mRNA) Chordaria linearis ClinC8C monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-linearis_contig90.16790.1
Unique NamemRNA_C-linearis_contig90.16790.1
TypemRNA
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Homology
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BLAST of mRNA_C-linearis_contig90.16790.1 vs. uniprot
Match: A0A6H5JM01_9PHAE (DNA-directed RNA polymerase III subunit RPC3 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JM01_9PHAE)

HSP 1 Score: 408 bits (1049), Expect = 5.240e-136
Identity = 261/360 (72.50%), Postives = 288/360 (80.00%), Query Frame = 1 
Query:  214 MAFLLESQMTVTALEPSRQKLALSVIEEYHGPIVKTVAEVLMRADRTTLAELTRLVQRDQGIMGVSRAGKTKTKVTAANVKESLLIMTQHNMVSAAMPTEREMRRARANLNSAAGAAAANIRMHYTLLPLEVLMRTRGPQFHSHASNTFSKVAGLIVDCFLRHGRRTLPDVKEELLSRAREAKRARKAQQASGGLADEXXXXXXQVEAEVTAEGIQKSFEELVMGKYIDKVAKLDLVTPTVEPEKAKKPSMTFGAPSGSTSNGGKGNSSGSGTNGKGNTVTAKNRPNGKNKELAARQQKGAAQTNARKRRILGHDSTGSSXXXXXXXXXXXXXXXELPVEMRNMVNM---GMDGMGACFG 1284
            MAFLLESQM + ALE SR+KL LSVIEEYHGPIV TVAEVLMRA+RTTLAELTRLV RDQGIMGVSRAGKT+TKVTAANVKESLLIMTQHNMV+AAMPTE+EMR+ARA+ +      ++NIR+HYTLLPLEVL+RTRGPQFHSHA+ TFSKVAGL+VDCFLRHGRRTLPDVKEELL R  EA RARKA        D XXXXXX    EVT+E IQKSFEELVM KYIDKV KLDLVTPTVEPEKAKKPSMTFGAP+ + S              KG + +A N  NG+NKELA RQQKGAAQ +ARKRR+LG DS  +    XXXXXXXXXXXXELPVEMR++V+    G DG GA  G
Sbjct:    1 MAFLLESQMPLVALESSRRKLVLSVIEEYHGPIVSTVAEVLMRAERTTLAELTRLVLRDQGIMGVSRAGKTRTKVTAANVKESLLIMTQHNMVAAAMPTEKEMRKARASSSG----RSSNIRLHYTLLPLEVLVRTRGPQFHSHAAKTFSKVAGLVVDCFLRHGRRTLPDVKEELLRREGEAARARKA---LANPEDXXXXXXXDNVQEVTSESIQKSFEELVMKKYIDKVPKLDLVTPTVEPEKAKKPSMTFGAPADNDS--------------KGKSASAANGQNGRNKELAERQQKGAAQRSARKRRMLGQDSNSNGVDGXXXXXXXXXXXXELPVEMRSLVSSMEEGFDGGGATDG 339
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BLAST of mRNA_C-linearis_contig90.16790.1 vs. uniprot
Match: D7FMS5_ECTSI (DNA-directed RNA polymerase III subunit RPC3 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMS5_ECTSI)

HSP 1 Score: 382 bits (980), Expect = 1.370e-127
Identity = 234/313 (74.76%), Postives = 250/313 (79.87%), Query Frame = 1 
Query:  214 MAFLLESQMTVTALEPSRQKLALSVIEEYHGPIVKTVAEVLMRADRTTLAELTRLVQRDQGIMGVSRAGKTKTKVTAANVKESLLIMTQHNMVSAAMPTEREMRRARANLNSAAGAAAANIRMHYTLLPLEVLMRTRGPQFHSHASNTFSKVAGLIVDCFLRHGRRTLPDVKEELLSRAREAKRARKAQQASGGLADEXXXXXXQVEAEVTAEGIQKSFEELVMGKYIDKVAKLDLVTPTVEPEKAKKPSMTFGAPSGSTSNGGKGNSSGSGTNGKGNTVTAKNRPNGKNKELAARQQKGAAQTNARKRRILG 1152
            MAFLLESQM + ALE SR+KL LSVIEEYHGPIV TVAEVLMRADRTTLAELTRLV RDQGIMGVSRAGKT TKVTAANVKESLLIMTQHNMV+AAMPTE+EMR+ARA+ +  +G    NIR+HYTLLPLEVL+RTRGPQFHSHA+ TFSKVAGL+VDCFLRHGRRTLPDVKEELL R  EA RARKA        D XXXXXX    EVT E IQKSFEELVM KYIDKV KLDLVTPTVEPEKAKKPSMTFGAP+GS                        N  NG+NKELA RQQKGAAQT+ARKRR+LG
Sbjct:    1 MAFLLESQMPLVALESSRRKLVLSVIEEYHGPIVSTVAEVLMRADRTTLAELTRLVLRDQGIMGVSRAGKTITKVTAANVKESLLIMTQHNMVAAAMPTEKEMRKARASSSGRSG----NIRLHYTLLPLEVLVRTRGPQFHSHAARTFSKVAGLVVDCFLRHGRRTLPDVKEELLRREGEAARARKA---LANPEDXXXXXXXDHVQEVTPESIQKSFEELVMKKYIDKVPKLDLVTPTVEPEKAKKPSMTFGAPAGSXXXXXXXXXXXX-------XXXXANGQNGRNKELAERQQKGAAQTSARKRRMLG 299
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BLAST of mRNA_C-linearis_contig90.16790.1 vs. uniprot
Match: A0A835ZD91_9STRA (DNA-directed RNA polymerase III subunit RPC3 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZD91_9STRA)

HSP 1 Score: 89.7 bits (221), Expect = 2.890e-15
Identity = 72/235 (30.64%), Postives = 116/235 (49.36%), Query Frame = 1 
Query:  238 MTVTALEPSRQKLALSVIEEYHGPIVKTVAEVLMRADRTTLAELTRLVQRDQGIMGVSRAGKTKTKVTAANVKESLLIMTQHNMVSAAMPTEREMRRARANLNSAAGAAAANIRMHYTLLPLEVLMRTRGPQFHSHASNTFSKVAGLIVDCFLRHGRRTLPDVKEELLSRAREAKRARKAQQASGGLADEXXXXXXQVEAEVTAEGIQKSFEELVMGKYIDKVAKLDLVTPTVEP 942
            MT  AL   +QKLAL+++ E+ G IVK VA+ L+R D+  L ++ R V+R+    G  R      +++   VK +LL++ QHN +   M T  E+RR++ +           ++++Y L   E + R RGP+F   AS     +A  +V+  L HGR    DV   +++  +  K+         G  DE                I+++F+ LV  ++I KVA LDL  P+  P
Sbjct:    1 MTSCAL--GQQKLALNILGEHFGDIVKVVAQALLRVDKAMLGDIIRRVKREIED-GRRRGPGPPLQISGKQVKSALLVLCQHNCLDVIMQTAEELRRSKVD---------GPLKLYYKLRVSECIERLRGPRFVHLASVMHGALAAAVVEALLLHGRLCRADVVAHVVNVLKADKQ---------GYMDENALRRR----------IERAFDTLVQERFIVKVAPLDLTRPSPPP 204
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig90.16790.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5JM01_9PHAE5.240e-13672.50DNA-directed RNA polymerase III subunit RPC3 n=1 T... [more]
D7FMS5_ECTSI1.370e-12774.76DNA-directed RNA polymerase III subunit RPC3 n=1 T... [more]
A0A835ZD91_9STRA2.890e-1530.64DNA-directed RNA polymerase III subunit RPC3 n=1 T... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig90contigC-linearis_contig90:613017..619406 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionRNA polymerase III subunit RPC82-related, helix-turn-helix
Ec32 orthologEc-21_000340.1
Exons10
Model size1462
Cds size1248
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930777.7288723-CDS-C-linearis_contig90:613016..6133251622930777.7288723-CDS-C-linearis_contig90:613016..613325Chordaria linearis ClinC8C monoicousCDSC-linearis_contig90 613017..613325 -
1690881245.0749497-CDS-C-linearis_contig90:613016..6133251690881245.0749497-CDS-C-linearis_contig90:613016..613325Chordaria linearis ClinC8C monoicousCDSC-linearis_contig90 613017..613325 -
1622930777.7432728-CDS-C-linearis_contig90:613882..6140811622930777.7432728-CDS-C-linearis_contig90:613882..614081Chordaria linearis ClinC8C monoicousCDSC-linearis_contig90 613883..614081 -
1690881245.0886722-CDS-C-linearis_contig90:613882..6140811690881245.0886722-CDS-C-linearis_contig90:613882..614081Chordaria linearis ClinC8C monoicousCDSC-linearis_contig90 613883..614081 -
1622930777.7590904-CDS-C-linearis_contig90:614535..6146531622930777.7590904-CDS-C-linearis_contig90:614535..614653Chordaria linearis ClinC8C monoicousCDSC-linearis_contig90 614536..614653 -
1690881245.0984597-CDS-C-linearis_contig90:614535..6146531690881245.0984597-CDS-C-linearis_contig90:614535..614653Chordaria linearis ClinC8C monoicousCDSC-linearis_contig90 614536..614653 -
1622930777.7757335-CDS-C-linearis_contig90:615266..6153781622930777.7757335-CDS-C-linearis_contig90:615266..615378Chordaria linearis ClinC8C monoicousCDSC-linearis_contig90 615267..615378 -
1690881245.1073515-CDS-C-linearis_contig90:615266..6153781690881245.1073515-CDS-C-linearis_contig90:615266..615378Chordaria linearis ClinC8C monoicousCDSC-linearis_contig90 615267..615378 -
1622930777.7930863-CDS-C-linearis_contig90:615682..6158141622930777.7930863-CDS-C-linearis_contig90:615682..615814Chordaria linearis ClinC8C monoicousCDSC-linearis_contig90 615683..615814 -
1690881245.1165755-CDS-C-linearis_contig90:615682..6158141690881245.1165755-CDS-C-linearis_contig90:615682..615814Chordaria linearis ClinC8C monoicousCDSC-linearis_contig90 615683..615814 -
1622930777.8131993-CDS-C-linearis_contig90:616307..6164481622930777.8131993-CDS-C-linearis_contig90:616307..616448Chordaria linearis ClinC8C monoicousCDSC-linearis_contig90 616308..616448 -
1690881245.1320827-CDS-C-linearis_contig90:616307..6164481690881245.1320827-CDS-C-linearis_contig90:616307..616448Chordaria linearis ClinC8C monoicousCDSC-linearis_contig90 616308..616448 -
1622930777.8269386-CDS-C-linearis_contig90:617052..6171841622930777.8269386-CDS-C-linearis_contig90:617052..617184Chordaria linearis ClinC8C monoicousCDSC-linearis_contig90 617053..617184 -
1690881245.1416714-CDS-C-linearis_contig90:617052..6171841690881245.1416714-CDS-C-linearis_contig90:617052..617184Chordaria linearis ClinC8C monoicousCDSC-linearis_contig90 617053..617184 -
1622930777.8431375-CDS-C-linearis_contig90:617615..6177201622930777.8431375-CDS-C-linearis_contig90:617615..617720Chordaria linearis ClinC8C monoicousCDSC-linearis_contig90 617616..617720 -
1690881245.1523902-CDS-C-linearis_contig90:617615..6177201690881245.1523902-CDS-C-linearis_contig90:617615..617720Chordaria linearis ClinC8C monoicousCDSC-linearis_contig90 617616..617720 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930777.8579197-UTR-C-linearis_contig90:617720..6177611622930777.8579197-UTR-C-linearis_contig90:617720..617761Chordaria linearis ClinC8C monoicousUTRC-linearis_contig90 617721..617761 -
1690881245.1652732-UTR-C-linearis_contig90:617720..6177611690881245.1652732-UTR-C-linearis_contig90:617720..617761Chordaria linearis ClinC8C monoicousUTRC-linearis_contig90 617721..617761 -
1622930777.869827-UTR-C-linearis_contig90:618700..6187521622930777.869827-UTR-C-linearis_contig90:618700..618752Chordaria linearis ClinC8C monoicousUTRC-linearis_contig90 618701..618752 -
1690881245.178029-UTR-C-linearis_contig90:618700..6187521690881245.178029-UTR-C-linearis_contig90:618700..618752Chordaria linearis ClinC8C monoicousUTRC-linearis_contig90 618701..618752 -
1622930777.8855195-UTR-C-linearis_contig90:619286..6194061622930777.8855195-UTR-C-linearis_contig90:619286..619406Chordaria linearis ClinC8C monoicousUTRC-linearis_contig90 619287..619406 -
1690881245.1884615-UTR-C-linearis_contig90:619286..6194061690881245.1884615-UTR-C-linearis_contig90:619286..619406Chordaria linearis ClinC8C monoicousUTRC-linearis_contig90 619287..619406 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig90.16790.1prot_C-linearis_contig90.16790.1Chordaria linearis ClinC8C monoicouspolypeptideC-linearis_contig90 613017..617720 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-linearis_contig90.16790.1

>prot_C-linearis_contig90.16790.1 ID=prot_C-linearis_contig90.16790.1|Name=mRNA_C-linearis_contig90.16790.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=416bp
MAFLLESQMTVTALEPSRQKLALSVIEEYHGPIVKTVAEVLMRADRTTLA
ELTRLVQRDQGIMGVSRAGKTKTKVTAANVKESLLIMTQHNMVSAAMPTE
REMRRARANLNSAAGAAAANIRMHYTLLPLEVLMRTRGPQFHSHASNTFS
KVAGLIVDCFLRHGRRTLPDVKEELLSRAREAKRARKAQQASGGLADEDD
DDDDQVEAEVTAEGIQKSFEELVMGKYIDKVAKLDLVTPTVEPEKAKKPS
MTFGAPSGSTSNGGKGNSSGSGTNGKGNTVTAKNRPNGKNKELAARQQKG
AAQTNARKRRILGHDSTGSSGKEGTNNSDDSDDEDELPVEMRNMVNMGMD
GMGACFGGAANAEDRPPPAKRKKMANGSGSGNGDTASAGRTRGRGRSRGR
GAKRGGISSSSKGKRR
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mRNA from alignment at C-linearis_contig90:613017..619406-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-linearis_contig90.16790.1 ID=mRNA_C-linearis_contig90.16790.1|Name=mRNA_C-linearis_contig90.16790.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=6390bp|location=Sequence derived from alignment at C-linearis_contig90:613017..619406- (Chordaria linearis ClinC8C monoicous)
GTTTTTTCTTCCTTTTCTTGCGCTACAGTATCGGCGTGAAATCAGGGAGG
CCGGGAGAGCCAGGCGCATCGATCGGCTCTCGAAACACCTGTACTGTACT
GCGCGCCTCCCCCGATAGCGGTAAGAATACTGGGAGGGCATATCCACTAA
TTCCGCGATCATCCAACAACTGCAGGGGTAGACTAGACAAGTTGTGTGGG
CTTGATTGAGAGAGAGGGCCATATTCCAATATTTCAAGTCCGCCAGTCAA
CAAGCCACCCAACCTCCATAATATAGGAACATACATCATCGGGGAAAGTG
CTCTTGCCGCTGTGTAGCCGGACATGAGGCAAGAAATAAGACATCAACAA
CATTGTGGAAAGTTTGCTCTTCTTCTTGTCGTCTTGTCTCTCACCGCAGT
CTGAAGGGGCAGGAGACCTCGACCTCGACCTAGAGTAGGAGTACCGCCGG
GACCGGCGCGGCGGAGAGCGGCTTCGAGATCGAGAGTACCGAGGCATGAT
TGACCACACCTCTCGTTTCAATGCTCTCTCTCCGTCTCTCCGTCCTCGAA
GGGCGACACGTGGGATGTGATGAAATCACACGAGATCCTTGCAATCACCC
ATCACTCCCCACGTGCCATCCATTTGCTGTGCCCCCACTCTGTGATCGGC
AAAGGTACCAGGCGAACAAGAGGCCTAGAGGCTTAGAGGGCCAAGGGGAG
GATCAGGTACGGCGTTTTCTTTGTGGTGGTACCATTTCTTGTATCCAAAT
TTGTGCGTCAAGCCCTCAAGTCATCCACTCCGTCTCGGGTGTTGCGCTGC
CCAACCGGGCTGGTTGCTGTGTTGCTCTTCGTCGTCAAAGAAAGGTTGTA
TGTTATCTACGGCTATCTATCTACAAGGGTGATGCTGGCAGGCTGTGTGT
GGGACCCCATGACAAGGTGTATTCAGCTTCGTCAGGCCTTATGTGCGAGA
CCTCGGTCGATCTCCAAATCCTATCGCATCCTGCCTCGCCACGCAACACC
CAGCTGTTTGGTTGATGCGTAGACTACAGCAGTAGTACAGCATTTAGCGC
TGTTATCTGGTGTGCAGATAAATTACGGCTGTGGAGTGCTACTCCTTTGA
ACATGCGGGCGCTGCACTTTCTCCGCAGCTCGAGAGCAGCTTACAGTGGT
GTTCTAAGCTCTTTGTCGAGGTTGATCAAGGTTAACGTTTGCCCCCCGAA
GTCCTTGCCTGTTGTTTAGCTTTGGATTGCGTGAAGGATTGGCTATTTAG
TAGCCTTTTCATGATCTGCCCCTGTCTCGCACTCCTGTAACTGCCCCCAC
GGCGGTGGACTGCTGCCGAGCACACGGATCGCCACCGCTCTGTGTCCCTT
TGCTTCATGATCCATTGATCCATTCCGTGTTTTGTGTGTTGTCCGTTTGT
GTAGACTACCCCCCACACTGCATTTTTACAAATGCCAACTGCTGTGGGCC
TGGCGAACTGATGTACCGCTGTAGTTTAGACTGAAGGCTTGCTCGCTTCT
CGTTCGTGGCCCCGTTGTGCTGCTGTTTTAGACTAACGATGGAATGTCCT
GATCTCTTGACCATGACCCTATTGGTGTACGGGTCGAGTTATCGATTTAT
GATCGGATTTCGGATTTTGTCTGCTATTCCCTCCCTCCTCCACAGCACCC
GTAGAATTGTACCACAAGTTTAGAGTAGAATTGGCGATGGCGTTTCTTTT
GGAGAGCCAGATGACAGTGACGGCGCTCGAGCCTTCCAGACAGAAGCTGG
CGCTGAGCGTCATCGAGGAGTACCACGGGCCCATCGTCAAGGTACCTGAG
CTTTCGTTATCGTTACCATACGTGTCGATAGTATGCTGCCTTGGATACGT
GGACTACTACTGCTGTAAGCGTCAATAGAGCCAAGCCCTGTTGCCGCAAA
CTATGAGTGCGCCGCCGTACATACATAACCTGAACCACCCAATTGTGTGA
CAAGATGTTGGTGGTTGGCCGTTCTTGGAAATTCGAGGGCACTCGTATTC
TTTCAACCGCAACTGAATATTGTAGCAAGCCATATCACCATGCCGGCGCC
GTGGATCATACTTCTACGTGCCTACCCATCCTTGAAACGCGCGCGCTAGC
TTGTCTCGCCATTGCCATGGTCATGCTGATTCATGCTCGGTCTAATGCTC
TTGTTTGGCTGTGGCTATTGGTGTTGTTGATTGGGATTGGCTTATGATAC
GTGGATTGATCTTCTGCCGCAGACGGTGGCGGAGGTCCTGATGCGAGCAG
ACCGCACAACGCTGGCTGAGTTAACGCGGCTAGTCCAGAGAGACCAGGGG
ATCATGGGCGTGTCTAGGGCAGGGAAGACCAAGACAAAAGTCACCGCCGC
CAACGTGAGTGTATGTCCGTCTTGTGTACCTGGTAGTTTTTTATGTAGGG
TTGCGACGCACTGTTGCGTCCTTCGGGGATTGTGTAGCATTTCAGTGGTG
GCGTACGTCTGATTTGCCAGATCAGTGTCCGTTGAAACCTCGTCGTAGTC
GCGACGGCAGTGGTGTTCGATTCGTGATGTTCATGGTGATGTTGTCGTGA
TGTTTCTTCAGCCTTGGTGGAGCAATTCATTCGTCAGCGTCGTTTTCTTT
ATATGCTTCTATATGTCATGCTGGATGCATGTCTGTTGCAGCGCAGCTGT
GACATGCCACCAGAAGTTGAAGTCCCGCTCGCGATTTGGAAAGTTCAATC
GCAGCTGAGACTAGTGCTATGCATAGGGTAAGGAGCGCTAGACAGCAGTG
TTGAAGGGTTTTGGTGTGTGCTTCGCGTCGATCGTGTCTGGCATCTGGCA
TCTGGTATCTGGTATGTGTGTATCGGTACATATACATATATGCCACACAG
GGAACAGGGAAGGAAAGTCCGGATCGATAGCGTTTTCGGTAAACTCTCGC
GTTGTTGGCTGTGCTGTGCTGTGCTGTGCTGTGCTGTGCTGTGCTGTGCT
GTGGCCAGGTAAAGGAATCGCTGCTCATCATGACTCAGCACAACATGGTA
TCCGCCGCTATGCCAACGGAACGGGAGATGAGGAGGGCCAGAGCCAACCT
CAACAGCGCCGCCGGCGCTGCCGCTGCCAACATCCGGATGCACTACACGG
TGGGCGAGATCTATCTATCTGCATATCGGTCTAAACTGCCGCATGTACTG
ATACACGTCAAAAGCCGTTGTCAATCTACTGGGTAGGCTAAAGTTGGTGG
ACACATCACATCACTTTGGTATATGGCCCAATTCGACTCGAACCTGCAGC
ACAGCAGAGTTTGTTACTCTATTAGTACGAGCAGCTCGTAGCAATAATGA
CTGATCAGTCATTCTAAGGGAAGGGTGCGGATGCCAATTGAAAAGTGATG
CATCAGTACCATCGATGCATCGCCCTTTGGTATGTAGGCCTACAAAAACA
TCAGTATTGGAAGCGTTTTCCGCAATAGCGTCCGGTTAACTTCCCCAAGG
GTCATGCATACTCGAGAGCAAGGCCGCGTTGCCTACTCGCCTCTTTAATC
GCTTTCGGATTCTTTTTCGCGTTGAGGCACGTTGACGATACACTCGAGTA
TATCACCCACCCCCCCCCCTCGATATGATATGATGTCTGTAGCTACTTCC
CTTGGAAGTTCTGATGAGAACTAGAGGCCCGCAGTTTCACTCCCACGCCA
GCAACACTTTTTCCAAGGTGGCGGGGCTGATCGTCGACTGCTTCCTGAGA
CATGGACGGAGGACACTACCTGACGTGAGCGAGCATTCTGTATTCCAGTA
TCCACCCTGACCTGTCTATATCGTTGGGTTGACAGCCATGCCATACCATG
TCTACGATGGATGTGTAGGATTAAAAAAAAACTTTGCATGGTGATGGTTC
CATTTTCCTGTCTCTCCCGCGTTGCTTTTTTTTTTTTATTGGGGTGTATT
GGAGTATTGGTATTGTACTCGGAAGAATTTAATTTCGTTTTGCCCCCTTC
GTTGCCCATCTGATACGCTCATGTTTTTGGTGGTGCTCTCATCTCATGTA
TGATGTGTTTCGGCCATTAAAATAACAGGTTAAGGAGGAGCTTCTGAGCA
GAGCCAGGGAGGCCAAGCGAGCGCGGAAGGCGCAGCAGGCTAGTGGTGGG
TTAGCAGATGAAGACGACGACGACGACGACCAAGTCGAAGGTATGGTGTA
CCATAGTTGGCATGCTCCAGCACCTTGTAACGTAGGCCCTCGGAAAGCTG
GTAGTAGAGTACTTCGATGCTAACCCTGGCTTCACTTTCAGTTCTGTATG
CCTGGTTGATGTACCAAGTAAGACCATACATGTCCGCAATTTATCCAGGT
CCTGCATTTTTTCACTCAAAAGTAGCACTCTATAGTCGGCTCTTTGCTGA
CCGCGTTCCGAGTGTGCCATGTCATTTCATGTCATACTTTTAACTTTTAA
CCAAACCAACCCCCTTGCCGTGTCGTGCCGTGTCGGGCCGTGTCGGGCCG
TGTCGGGCCGTGTCATGGTGCGGTGCGGTGCCGTGCCGTGTAGTAGATAC
ATCCCCTTTTTTCCTTTCGTGAACTGTGGCGAAAGCGTTGTTGCCGCTCC
TCGTGTGGGGTGTTGCCTCGCCTCGCATTGCCTTTCTTTACTATTGCCGT
AAGACCCACCTTGTCGATCGAACGCTTGTTGATTCGGTTTCGATCGGAAC
AATGCTGTTGTGTCTTATTCCGTTCTCTTTGCCTTTGCCATTCCATTGCC
CCGGCCTCTACCACCTCGGTGTTGGTGTTGGTGTTGGTGTTGGTGTTGGT
GAGCAGAGGTGACTGCGGAAGGCATCCAGAAGAGCTTCGAGGAGCTGGTG
ATGGGCAAGTACATCGACAAGGTGGCCAAGCTCGACCTCGTCACCCCCAC
CGTCGAACCAGAGAAGGCGAAGTGAGTCGACCGCATCAACCAACTCTAAC
AGCTCTTGTTTGATAGTCTGACGGGCGCGGGAGAACTCCCGCCATCCTGG
GGGGCCCGCTGCCTTTCCGTCTTAACGCCTCTGACTTGTGTATGAAAGAC
GAGGATGCCATGGCTCTTGCTTGTGCCTTGTGGAGGTGCCGTACTATGTC
ACGGACTTAACCTGTTTACATCTCCCAGGTATTCTATTATGCACACATGA
CATTTCTTTTACTCGTTTGCGTCTTTTGTTTTGTCATGAACAGCGGTTTG
ACGTGTCAAGCACAGATGGCCCGACAGCCGTTGGTCAGTATTATAGTTCA
ATATTTCCGATTCGTGGAGCGCGCTACCGGCGTTGTTGACGCTGTTGCTG
TTGCTGTTCTCGTTTTGTTGGCTTGGCTTGCCTTGTCTTGTCTTGTCTTG
TCTTGTCTTGTCTTGGTCCGTTCAGGAAACCATCGATGACCTTCGGAGCG
CCCAGCGGGAGCACCAGCAACGGGGGCAAGGGAAACAGCAGCGGCAGCGG
CACCAACGGCAAAGGCAACACCGTGACAGCCAAGAACCGACCAAACGGCA
AGAACAAGGAGCTGGCCGCACGCCAGCAGAAGGGGGCGGCGCAAACCAAC
GCGAGGAAGCGCAGGATACTCGGGGTAAGAATAAGAGGTCAAAGTCTCAG
CTTTGCCGTAAACCTACTCATTATAGGATCAATGCGCGCTTTGCCTCGCT
GGCGGATGGGCGGTGTTTGTGGGGTCTGAATCTGCAGGGACGCAGTCATA
TGGATGCTTCTGGAGTTCATTGACTGATCTTGTGTGGGGCCGCTTTTTTT
CTTGTTGTCTGTTCCTTTGTGTTCCTTTGTCCTTTATTTGCTGACGTTTC
GTGTACCCGAGCAGGAGATTAGAGATTAGACCTCGGGGGGGTACGCCAAT
TGGAAAGGGAAGCCCCATTTGAACCCCAAACATCATCACCATTCAGCAAA
TCTACCTGTTTTTTTTTCTGGTTCCGTTGACATCCTGCCTCGCTGTACCT
AAAAAGTTATATCCCACTCTGTCGGAGCGACTGCCGTAATCGCGATGGGA
TTGGATCGATTGGACCGGATCGACTTGATGCCGTTAGACGAATTACATTT
TCTCTGTCGGCACGTATGTACGTCACATGACATGACATACGCAATACGTT
GATGTTGTACGTTGGCTAATGGCAATGGCAGCACGACTCCACCGGCAGCA
GCGGCAAGGAGGGCACGAACAACAGCGACGACTCGGACGACGAGGACGAG
CTCCCCGTGGAAATGCGGAACATGGTGAACATGGGCATGGACGGCATGGG
AGCATGCTTTGGCGGGGCGGCTAATGCCGAGGACAGACCACCCCCTGCCA
AGAGGAAGAAGATGGCCAACGGTAGCGGTAGCGGTAACGGCGACACTGCC
TCGGCCGGGAGGACCAGAGGGCGAGGGAGAAGCCGCGGGAGAGGGGCCAA
GCGCGGGGGCATTTCTAGTTCTAGCAAGGGCAAGAGGAGG
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Coding sequence (CDS) from alignment at C-linearis_contig90:613017..619406-

>mRNA_C-linearis_contig90.16790.1 ID=mRNA_C-linearis_contig90.16790.1|Name=mRNA_C-linearis_contig90.16790.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=2496bp|location=Sequence derived from alignment at C-linearis_contig90:613017..619406- (Chordaria linearis ClinC8C monoicous)
ATGGCGTTTCTTTTGGAGAGCCAGATGACAGTGACGGCGCTCGAGCCTTC
CAGACAGAAGCTGGCGCTGAGCGTCATCGAGGAGTACCACGGGCCCATCG
TCAAGATGGCGTTTCTTTTGGAGAGCCAGATGACAGTGACGGCGCTCGAG
CCTTCCAGACAGAAGCTGGCGCTGAGCGTCATCGAGGAGTACCACGGGCC
CATCGTCAAGACGGTGGCGGAGGTCCTGATGCGAGCAGACCGCACAACGC
TGGCTGAGTTAACGCGGCTAGTCCAGAGAGACCAGGGGATCATGGGCGTG
TCTAGGGCAGGGAAGACCAAGACAAAAGTCACCGCCGCCAACACGGTGGC
GGAGGTCCTGATGCGAGCAGACCGCACAACGCTGGCTGAGTTAACGCGGC
TAGTCCAGAGAGACCAGGGGATCATGGGCGTGTCTAGGGCAGGGAAGACC
AAGACAAAAGTCACCGCCGCCAACGTAAAGGAATCGCTGCTCATCATGAC
TCAGCACAACATGGTATCCGCCGCTATGCCAACGGAACGGGAGATGAGGA
GGGCCAGAGCCAACCTCAACAGCGCCGCCGGCGCTGCCGCTGCCAACATC
CGGATGCACTACACGGTAAAGGAATCGCTGCTCATCATGACTCAGCACAA
CATGGTATCCGCCGCTATGCCAACGGAACGGGAGATGAGGAGGGCCAGAG
CCAACCTCAACAGCGCCGCCGGCGCTGCCGCTGCCAACATCCGGATGCAC
TACACGCTACTTCCCTTGGAAGTTCTGATGAGAACTAGAGGCCCGCAGTT
TCACTCCCACGCCAGCAACACTTTTTCCAAGGTGGCGGGGCTGATCGTCG
ACTGCTTCCTGAGACATGGACGGAGGACACTACCTGACCTACTTCCCTTG
GAAGTTCTGATGAGAACTAGAGGCCCGCAGTTTCACTCCCACGCCAGCAA
CACTTTTTCCAAGGTGGCGGGGCTGATCGTCGACTGCTTCCTGAGACATG
GACGGAGGACACTACCTGACGTTAAGGAGGAGCTTCTGAGCAGAGCCAGG
GAGGCCAAGCGAGCGCGGAAGGCGCAGCAGGCTAGTGGTGGGTTAGCAGA
TGAAGACGACGACGACGACGACCAAGTCGAAGGTTAAGGAGGAGCTTCTG
AGCAGAGCCAGGGAGGCCAAGCGAGCGCGGAAGGCGCAGCAGGCTAGTGG
TGGGTTAGCAGATGAAGACGACGACGACGACGACCAAGTCGAAGCAGAGG
TGACTGCGGAAGGCATCCAGAAGAGCTTCGAGGAGCTGGTGATGGGCAAG
TACATCGACAAGGTGGCCAAGCTCGACCTCGTCACCCCCACCGTCGAACC
AGAGAAGGCGAACAGAGGTGACTGCGGAAGGCATCCAGAAGAGCTTCGAG
GAGCTGGTGATGGGCAAGTACATCGACAAGGTGGCCAAGCTCGACCTCGT
CACCCCCACCGTCGAACCAGAGAAGGCGAAGAAACCATCGATGACCTTCG
GAGCGCCCAGCGGGAGCACCAGCAACGGGGGCAAGGGAAACAGCAGCGGC
AGCGGCACCAACGGCAAAGGCAACACCGTGACAGCCAAGAACCGACCAAA
CGGCAAGAACAAGGAGCTGGCCGCACGCCAGCAGAAGGGGGCGGCGCAAA
CCAACGCGAGGAAGCGCAGGATACTCGGGGAAACCATCGATGACCTTCGG
AGCGCCCAGCGGGAGCACCAGCAACGGGGGCAAGGGAAACAGCAGCGGCA
GCGGCACCAACGGCAAAGGCAACACCGTGACAGCCAAGAACCGACCAAAC
GGCAAGAACAAGGAGCTGGCCGCACGCCAGCAGAAGGGGGCGGCGCAAAC
CAACGCGAGGAAGCGCAGGATACTCGGGCACGACTCCACCGGCAGCAGCG
GCAAGGAGGGCACGAACAACAGCGACGACTCGGACGACGAGGACGAGCTC
CCCGTGGAAATGCGGAACATGGTGAACATGGGCATGGACGGCATGGGAGC
ATGCTTTGGCGGGGCGGCTAATGCCGAGGACAGACCACCCCCTGCCAAGA
GGAAGAAGATGGCCAACGGTAGCGGTAGCGGTAACGGCGACACTGCCTCG
GCCGGGAGGACCAGAGGGCGAGGGAGAAGCCGCGGGAGAGGGGCCAAGCG
CGGGGGCATTTCTAGTTCTAGCAAGGGCAAGAGGAGGCACGACTCCACCG
GCAGCAGCGGCAAGGAGGGCACGAACAACAGCGACGACTCGGACGACGAG
GACGAGCTCCCCGTGGAAATGCGGAACATGGTGAACATGGGCATGGACGG
CATGGGAGCATGCTTTGGCGGGGCGGCTAATGCCGAGGACAGACCACCCC
CTGCCAAGAGGAAGAAGATGGCCAACGGTAGCGGTAGCGGTAACGGCGAC
ACTGCCTCGGCCGGGAGGACCAGAGGGCGAGGGAGAAGCCGCGGGAGAGG
GGCCAAGCGCGGGGGCATTTCTAGTTCTAGCAAGGGCAAGAGGAGG
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