mRNA_C-linearis_contig90.16756.1 (mRNA) Chordaria linearis ClinC8C monoicous
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Overview
Homology
BLAST of mRNA_C-linearis_contig90.16756.1 vs. uniprot
Match: D7FTC2_ECTSI (AMMECR1 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTC2_ECTSI) HSP 1 Score: 456 bits (1173), Expect = 1.640e-144 Identity = 375/885 (42.37%), Postives = 464/885 (52.43%), Query Frame = 1
Query: 1 MISHIGSVLPSGLRDLSKSITSTIASQLSLAPVETRVEPNNTKA-------PAIDVDVLLSYYAHFSEHRPSSRLLKERLS----KDSRSAKLLVPGSPAFERPWRVPNQAARGGHCTIATMHDNNSRSTSVPTSSAEARPKTTVASTGGRFVRGKVETNKSLGPNRRVSDRHICHEQKGSYSSQPHRRQQQEKQMPKEAGSMPQTA------EAYGSRSEGSMGGGREGTPKTA-----RSGMEDTQP--LPQIQPTEAAVVVQAAVVVAENRDAARAREPLARRDDEETHEKPKGLLPKRPSTAPALF----EKLLHLPEHYNAGVERGGVQGSTPASTAREDPATPTPGCDAARPLNGSTSHLGTSSAGESKRSDNDSEGSSVGHTPQKLRERDLPAEPRPHGTFTTTTPAKDAEQLTA-TSIFDADLDLISPVNLRPST-AEAQRRRSIEVDAALSRSSRLPPSCSLTVGS---EAGFTLSTGSMIGEQLGDGKNCGGG-----KATGNGSMPGFSDSRSSSTAVLGRATCTTWTQWRRPGDLGELDLRADLLHCTNRRGSRRQVLGRATNGAVAGVGWGGNDQMMRVAAAPKVSRAAGREQHRTLAANPV--EEQRPDTRERFYDAPVGHLKALNPCFRCFDALMHHSRGGVEGDELGRHRQAMWSSVAATRDPHVALFVRWESLDKDLERYIPTGFAGSFTPRPFRPALAEYAVKAA-QDPKFWGLGWAQIPDTRCMVTVVKSLEVAQHDTDWVSNRHGLILSFEDAAGRHYQAAVFPETMCKAGWNKEYTIDALYRKAGY---RGKRPRN------ATKTPSTMPSSDAAPPDT---DPSGGTAAADHDGHAHDPVVSRTAVLLRFQTVSFRMGFCKY 2496
M SH+ + PS + SKSIT+TIASQL+L+ + V N KA P ID DVLLSYYAH +EHRPSSRLLKER+ K RSA LLV GSP FERPWR P +A G N RS+S + A RPKT + G+ ++ S G +RR S H G S E+ +P AG + Q E G S+ G G PK + RS + T P LPQI + V R+ D E+P L +RP TAP+ E++ + GV+ G +T T+ E A +PG R N +S+ + SD D +VGHT + RD RP T TP A T+ T +FDA S ++ RPST A RR +IE DAALSRSS LPP+ + + S E G + S++G GD + GG G FS S L AT TWT+ PGD G+LD+ ++ ++ + + NGA G GWGG DQM RVAAAPK A GR Q LAA E++RPDTRER YDAP+ LK+ +PC RCFDALM H R G +EL R R + S+VAA DPHVA FVRWE++D+ L R+ P GF GSFTP PFRPALAEYAVKAA +DPKFWGLGWA+IPDT +V + QH+ DW+SNRHGLILSF+D AGRH Q+ +FPET+ KAGWNKE I+A+Y+KAGY R KR N AT TPS S P DP+ G DPVVSRTAV+LRF+TVSFRMGF KY
Sbjct: 1 MFSHVSNAFPSSFSEFSKSITNTIASQLNLSGNKREVP--NYKADGDAHTPPTIDPDVLLSYYAHAAEHRPSSRLLKERVFDRRLKGPRSANLLVSGSPIFERPWRAPERAPGRG---------NKRRSSSAQSFGAPYRPKTAASLQSGKNLQD------SSGNHRRSS--HSL----GGVSG--------EECVPLSAGGLQQRVKRTQRHEQAGEGSQEIAGWRSRGVPKASTRARTRSSLTATPPEVLPQIPHGDPTPVPADDHAEQGGLGEGGLGHEDCRKSDAPAAEEPTETLSERPLTAPSAVTLSPERVGQRALDCDVGVD-GVADEATTEPTSGETSAA-SPGWGPRRSSNDGDRRSTSSTRKSIRSSDADRNDDNVGHTRPEQHARDRMT--RPRTTPAVATPGVGASFRTSETILFDAQPVPPSLLSRRPSTTAPPSRRPTIETDAALSRSSLLPPASTASAPSLPFERGSAILGNSVVGGS-GDSRRVGGSDNCEFSTAGRSGEDWFSSS-------LSGATGATWTKRWHPGDSGDLDVGSESVYGESSWQNEGAAAAWTNNGAATGAGWGGEDQMDRVAAAPKSVAAFGRRQRGILAAGGGVDEDRRPDTRERCYDAPIEVLKSFHPCVRCFDALMGHLRDGTGAEEL-RRRTSSGSTVAAG-DPHVAFFVRWETMDRGLGRFTPRGFMGSFTPSPFRPALAEYAVKAATEDPKFWGLGWARIPDTSYLV-----VRPVQHERDWLSNRHGLILSFKDGAGRHCQSTLFPETIRKAGWNKERAIEAIYQKAGYWRTRKKRSENPSKPLVATPTPSERKSHMFPTPTVVVADPASG----------DDPVVSRTAVMLRFETVSFRMGFGKY 825
BLAST of mRNA_C-linearis_contig90.16756.1 vs. uniprot
Match: A0A6H5J567_9PHAE (AMMECR1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J567_9PHAE) HSP 1 Score: 425 bits (1092), Expect = 2.320e-132 Identity = 359/904 (39.71%), Postives = 452/904 (50.00%), Query Frame = 1
Query: 1 MISHIGSVLPSGLRDLSKSITSTIASQLSLAPVETRVEPNNTKA-------PAIDVDVLLSYYAHFSEHRPSSRLLKE----RLSKDSRSAKLLVPGSPAFERPWRVPNQAARGGHCTIATMHDNNSRSTSVPTSSAEARPKTTVASTGGRFVRGKVETNKSLGPNRRVSDR--HICHEQKGSYSSQPHRRQQQEKQMPKEAGSMPQTAEAYGSRSEGSMGGGREGTPKTARSGMEDTQ-----PLPQIQPTEAAVVVQAAVVVAENR--------------DAARAREPLARRDDEETHEKPKGLLPKRPSTAPALF----EKLLHLPEHYNAGVERGGVQGSTPASTAREDPATPTPGCDAARPLNGSTSHLGTSSAGESKRS--------DNDSEGSSVGHTPQKLRERDLPAEPRPHGTFTTTTPAKDAEQLTATSI-FDADLDLISPVNLRPST-AEAQRRRSIEVDAALSRSSRLPPSCSLTVGS---EAGFTLSTGSMIGEQLGDGKNCGGGKATGNGSMPGFSDSRSSSTAVLGRATCTTWTQWRRPGDLGELDLRADLLHCTNRRGSRRQVLGRATNGAVAGVGWGGNDQ-----------------MMRVAAAPKVSRAAGREQHRTLAAN--PVEEQRPDTRERFYDAPVGHLKALNPCFRCFDALMHHSRGGVEGDELGRHRQAMWSSVAATRDPHVALFVRWESLDKDLERYIPTGFAGSFTPRPFRPALAEYAVKAA-QDPKFWGLGWAQIPDTRCMVTVVKSLEVAQHDTDWVSNRHGLILSFEDAAGRHYQAAVFPETMCKAGWNKEYTIDALYRKAGY---RGKRPRNATKTPSTMPSSDAAPPDTDPSGGTAAADHDGHAHDPVVSRTAVLLRFQTVSFRMGFCKY 2496
M SH S PS +LSKSIT+ IAS L L+ + E N KA P ID DVLLSYYAH + HRPSSRLLKE R RSA LLV GSP FERPWR P +A G N RS+S P+ RPKT R ++ S G +RR S + E+ S+ R++ + Q ++AG Q + SR G + TP +S + T P+P P V AE+ D +R+ P A E+P L KRP TAP+ E+ P + GV+ + +T ++ + A PG + R N T + S+RS D D G V T D A RP T TP A T+ I FDA S ++ RPST A RR +IE DAALSRSS LP + + + S E G T+ S+ G G + GG + + S G S S+++ G TC TWT+ PGD +LD ++ + S NGA G GWGG DQ M R+AAAPK A GR+Q LAA E++RPDTRE+ Y AP+ LK+ +PC RCFDALM H R G EL R+ W S A DPHVA F+RWE++D+ L R++PTGF GSFTP PFRPALAEYAVKAA +DPKFWGLGWAQIPDTRC +H+ DW+S+RHGLILSF+D AGRH Q+ +FPET+CKAGWNKE I+A+Y+KAGY R KR N +K P+ P+ A D + DPVVS TAV+LRF+TVSFRMGF Y
Sbjct: 1 MFSHASSAFPSSFSELSKSITNKIASHLKLSG--NKPEVPNYKADGDAQTPPTIDPDVLLSYYAHAAAHRPSSRLLKENMFGRRLNGPRSANLLVSGSPIFERPWRAPERAPGRG---------NKRRSSSAPSFGVAYRPKTAATLQSRRHLKD------SSGNHRRSSHSLGRVSEEEHVLLSAGGQRQRVKRTQRHEQAGEASQEIAGWRSR-----GVPKASTPARIKSSLSATPAEVLPPIPYGDPPP---------VTAEDHAEQGGLGEGGPGHEDCSRSAAPAA--------EEPAETLSKRPLTAPSAVTLSSERACRRPLGCDVGVDEAANEATTKPTSG--ETAAALPGWGSCRSFNDGDRRSSTKKSIRSRRSXXXXXRSIDADRIGDIVCRTTPDQHAGDRMA--RPRTTPAGATPGVAASFRTSERILFDAQPGPSSLLSRRPSTTAPPSRRLTIETDAALSRSSLLPLATAASAHSLSFERGNTILGKSVFGGSGGSPR--AGGSSNCDLSTAGRSCEDWFSSSLSG-TTCATWTKRWHPGDSDDLDGGGVSVYGESSWQSGGVAAAWTNNGAATGAGWGGGDQNQTTCVVPLCMSLDDSQMDRMAAAPKSVAAFGRKQRGILAAGGGADEDRRPDTREQCYGAPIEVLKSFHPCVRCFDALMGHLRDGTGAQEL--RRRTPWGSTAVAGDPHVAFFIRWETMDRRLGRFVPTGFRGSFTPSPFRPALAEYAVKAAIEDPKFWGLGWAQIPDTRC-----------KHERDWLSHRHGLILSFKDDAGRHCQSTLFPETICKAGWNKERAIEAMYQKAGYWRPRKKRSENPSKPLVATPTPSERKRHLFPTPTVVA---DPASDDPVVSGTAVMLRFETVSFRMGFGTY 842
BLAST of mRNA_C-linearis_contig90.16756.1 vs. uniprot
Match: A0A168E3E0_CORFA (Ammecr1 family protein n=1 Tax=Cordyceps fumosorosea (strain ARSEF 2679) TaxID=1081104 RepID=A0A168E3E0_CORFA) HSP 1 Score: 84.0 bits (206), Expect = 4.900e-14 Identity = 53/159 (33.33%), Postives = 73/159 (45.91%), Query Frame = 1
Query: 1891 SSVAATRDPHVALFVRWESLDKDL----------------ERYIPTGFAGSFTPRPFRPALAEYA-VKAAQDPKFWGLGWAQIPDTRCMVTVVKSLEVAQHDTDWVSNRHGLILSFEDAAGRHYQAAVFPETMCKAGWNKEYTIDALYRKAGYRGKRPR 2316
SS+ LFV W +LD + G G+F +P L EYA + A QD +F + +++ + VT++ E A DW RHG+ LSF DAAGR Y A P+ + GW KE T+ +L RKAG+ G R R
Sbjct: 84 SSLTPANITSAPLFVTWNTLDNASPDDPDPXXXXXXXXXDDGVSLRGCIGTFESQPLAEGLPEYALISALQDTRFPPVTASELSTLQVAVTLLTDFEEAADALDWEVGRHGIRLSFRDAAGRRYGATYLPDIAAEQGWTKEETLFSLARKAGWTGSRAR 242
BLAST of mRNA_C-linearis_contig90.16756.1 vs. uniprot
Match: Q4N2T9_THEPA (AMMECR1 domain-containing protein n=1 Tax=Theileria parva TaxID=5875 RepID=Q4N2T9_THEPA) HSP 1 Score: 71.2 bits (173), Expect = 2.920e-10 Identity = 52/171 (30.41%), Postives = 80/171 (46.78%), Query Frame = 1
Query: 1804 CFRCFDALMHHSRGGVEGDELGRHRQAMWSSVA--ATRDPHVALFVRWESLDKDLERYIPTGFAGSFTPRPFRPALAEYA-VKAAQDPKFWGLGWAQIPDTRCMVTVVKSLEVAQHDTDWVSNRHGLILSFEDAAGRHYQAAVFPETMCKAGWNKEYTIDALYRKAGYRGK 2307
C CFDAL +EL + +A ++D LFV W + D E G G+ P L +YA + A QD +F + +I + C ++++ S E + DW +HGL++ F D+ G Y A PE + +KEY ++ L RK+GYRG+
Sbjct: 17 CVVCFDALE---------EELNNKKPESRECLAKLTSQDARCPLFVTWNLKNGDDEDL--RGCIGTLEPTSLNN-LKKYARMSAFQDSRFPPIRSKEIQNLICKLSLLHSYEECKDYLDWEIGKHGLVVEF-DSNGFSYSATYLPEVALEHNMSKEYAVEQLIRKSGYRGR 174
BLAST of mRNA_C-linearis_contig90.16756.1 vs. uniprot
Match: A0A7S2AKX2_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2AKX2_9STRA) HSP 1 Score: 56.2 bits (134), Expect = 4.840e-6 Identity = 25/46 (54.35%), Postives = 31/46 (67.39%), Query Frame = 1
Query: 2167 HGLILSFEDAAGRHYQAAVFPETMCKAGWNKEYTIDALYRKAGYRG 2304
HG+ +SFED R Y + P+ + GW+KE TIDAL RKAGYRG
Sbjct: 4 HGIAISFEDYKHRVYGGSFLPDVPTRCGWDKEETIDALIRKAGYRG 49 The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig90.16756.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 5
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig90.16756.1 >prot_C-linearis_contig90.16756.1 ID=prot_C-linearis_contig90.16756.1|Name=mRNA_C-linearis_contig90.16756.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=841bp MISHIGSVLPSGLRDLSKSITSTIASQLSLAPVETRVEPNNTKAPAIDVDback to top mRNA from alignment at C-linearis_contig90:67119..72585+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-linearis_contig90.16756.1 ID=mRNA_C-linearis_contig90.16756.1|Name=mRNA_C-linearis_contig90.16756.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=5467bp|location=Sequence derived from alignment at C-linearis_contig90:67119..72585+ (Chordaria linearis ClinC8C monoicous)back to top Coding sequence (CDS) from alignment at C-linearis_contig90:67119..72585+ >mRNA_C-linearis_contig90.16756.1 ID=mRNA_C-linearis_contig90.16756.1|Name=mRNA_C-linearis_contig90.16756.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=5046bp|location=Sequence derived from alignment at C-linearis_contig90:67119..72585+ (Chordaria linearis ClinC8C monoicous)back to top |