prot_C-linearis_contig90.16756.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig90.16756.1
Unique Nameprot_C-linearis_contig90.16756.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length841
Homology
BLAST of mRNA_C-linearis_contig90.16756.1 vs. uniprot
Match: D7FTC2_ECTSI (AMMECR1 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTC2_ECTSI)

HSP 1 Score: 456 bits (1173), Expect = 1.640e-144
Identity = 375/885 (42.37%), Postives = 464/885 (52.43%), Query Frame = 0
Query:    1 MISHIGSVLPSGLRDLSKSITSTIASQLSLAPVETRVEPNNTKA-------PAIDVDVLLSYYAHFSEHRPSSRLLKERLS----KDSRSAKLLVPGSPAFERPWRVPNQAARGGHCTIATMHDNNSRSTSVPTSSAEARPKTTVASTGGRFVRGKVETNKSLGPNRRVSDRHICHEQKGSYSSQPHRRQQQEKQMPKEAGSMPQTA------EAYGSRSEGSMGGGREGTPKTA-----RSGMEDTQP--LPQIQPTEAAVVVQAAVVVAENRDAARAREPLARRDDEETHEKPKGLLPKRPSTAPALF----EKLLHLPEHYNAGVERGGVQGSTPASTAREDPATPTPGCDAARPLNGSTSHLGTSSAGESKRSDNDSEGSSVGHTPQKLRERDLPAEPRPHGTFTTTTPAKDAEQLTA-TSIFDADLDLISPVNLRPST-AEAQRRRSIEVDAALSRSSRLPPSCSLTVGS---EAGFTLSTGSMIGEQLGDGKNCGGG-----KATGNGSMPGFSDSRSSSTAVLGRATCTTWTQWRRPGDLGELDLRADLLHCTNRRGSRRQVLGRATNGAVAGVGWGGNDQMMRVAAAPKVSRAAGREQHRTLAANPV--EEQRPDTRERFYDAPVGHLKALNPCFRCFDALMHHSRGGVEGDELGRHRQAMWSSVAATRDPHVALFVRWESLDKDLERYIPTGFAGSFTPRPFRPALAEYAVKAA-QDPKFWGLGWAQIPDTRCMVTVVKSLEVAQHDTDWVSNRHGLILSFEDAAGRHYQAAVFPETMCKAGWNKEYTIDALYRKAGY---RGKRPRN------ATKTPSTMPSSDAAPPDT---DPSGGTAAADHDGHAHDPVVSRTAVLLRFQTVSFRMGFCKY 832
            M SH+ +  PS   + SKSIT+TIASQL+L+  +  V   N KA       P ID DVLLSYYAH +EHRPSSRLLKER+     K  RSA LLV GSP FERPWR P +A   G         N  RS+S  +  A  RPKT  +   G+ ++       S G +RR S  H      G  S         E+ +P  AG + Q        E  G  S+   G    G PK +     RS +  T P  LPQI   +   V                     R+ D    E+P   L +RP TAP+      E++       + GV+ G    +T   T+ E  A  +PG    R  N       +S+    + SD D    +VGHT  +   RD     RP  T    TP   A   T+ T +FDA     S ++ RPST A   RR +IE DAALSRSS LPP+ + +  S   E G  +   S++G   GD +  GG         G      FS S       L  AT  TWT+   PGD G+LD+ ++ ++  +   +         NGA  G GWGG DQM RVAAAPK   A GR Q   LAA     E++RPDTRER YDAP+  LK+ +PC RCFDALM H R G   +EL R R +  S+VAA  DPHVA FVRWE++D+ L R+ P GF GSFTP PFRPALAEYAVKAA +DPKFWGLGWA+IPDT  +V     +   QH+ DW+SNRHGLILSF+D AGRH Q+ +FPET+ KAGWNKE  I+A+Y+KAGY   R KR  N      AT TPS   S     P     DP+ G           DPVVSRTAV+LRF+TVSFRMGF KY
Sbjct:    1 MFSHVSNAFPSSFSEFSKSITNTIASQLNLSGNKREVP--NYKADGDAHTPPTIDPDVLLSYYAHAAEHRPSSRLLKERVFDRRLKGPRSANLLVSGSPIFERPWRAPERAPGRG---------NKRRSSSAQSFGAPYRPKTAASLQSGKNLQD------SSGNHRRSS--HSL----GGVSG--------EECVPLSAGGLQQRVKRTQRHEQAGEGSQEIAGWRSRGVPKASTRARTRSSLTATPPEVLPQIPHGDPTPVPADDHAEQGGLGEGGLGHEDCRKSDAPAAEEPTETLSERPLTAPSAVTLSPERVGQRALDCDVGVD-GVADEATTEPTSGETSAA-SPGWGPRRSSNDGDRRSTSSTRKSIRSSDADRNDDNVGHTRPEQHARDRMT--RPRTTPAVATPGVGASFRTSETILFDAQPVPPSLLSRRPSTTAPPSRRPTIETDAALSRSSLLPPASTASAPSLPFERGSAILGNSVVGGS-GDSRRVGGSDNCEFSTAGRSGEDWFSSS-------LSGATGATWTKRWHPGDSGDLDVGSESVYGESSWQNEGAAAAWTNNGAATGAGWGGEDQMDRVAAAPKSVAAFGRRQRGILAAGGGVDEDRRPDTRERCYDAPIEVLKSFHPCVRCFDALMGHLRDGTGAEEL-RRRTSSGSTVAAG-DPHVAFFVRWETMDRGLGRFTPRGFMGSFTPSPFRPALAEYAVKAATEDPKFWGLGWARIPDTSYLV-----VRPVQHERDWLSNRHGLILSFKDGAGRHCQSTLFPETIRKAGWNKERAIEAIYQKAGYWRTRKKRSENPSKPLVATPTPSERKSHMFPTPTVVVADPASG----------DDPVVSRTAVMLRFETVSFRMGFGKY 825          
BLAST of mRNA_C-linearis_contig90.16756.1 vs. uniprot
Match: A0A6H5J567_9PHAE (AMMECR1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J567_9PHAE)

HSP 1 Score: 425 bits (1092), Expect = 2.320e-132
Identity = 359/904 (39.71%), Postives = 452/904 (50.00%), Query Frame = 0
Query:    1 MISHIGSVLPSGLRDLSKSITSTIASQLSLAPVETRVEPNNTKA-------PAIDVDVLLSYYAHFSEHRPSSRLLKE----RLSKDSRSAKLLVPGSPAFERPWRVPNQAARGGHCTIATMHDNNSRSTSVPTSSAEARPKTTVASTGGRFVRGKVETNKSLGPNRRVSDR--HICHEQKGSYSSQPHRRQQQEKQMPKEAGSMPQTAEAYGSRSEGSMGGGREGTPKTARSGMEDTQ-----PLPQIQPTEAAVVVQAAVVVAENR--------------DAARAREPLARRDDEETHEKPKGLLPKRPSTAPALF----EKLLHLPEHYNAGVERGGVQGSTPASTAREDPATPTPGCDAARPLNGSTSHLGTSSAGESKRS--------DNDSEGSSVGHTPQKLRERDLPAEPRPHGTFTTTTPAKDAEQLTATSI-FDADLDLISPVNLRPST-AEAQRRRSIEVDAALSRSSRLPPSCSLTVGS---EAGFTLSTGSMIGEQLGDGKNCGGGKATGNGSMPGFSDSRSSSTAVLGRATCTTWTQWRRPGDLGELDLRADLLHCTNRRGSRRQVLGRATNGAVAGVGWGGNDQ-----------------MMRVAAAPKVSRAAGREQHRTLAAN--PVEEQRPDTRERFYDAPVGHLKALNPCFRCFDALMHHSRGGVEGDELGRHRQAMWSSVAATRDPHVALFVRWESLDKDLERYIPTGFAGSFTPRPFRPALAEYAVKAA-QDPKFWGLGWAQIPDTRCMVTVVKSLEVAQHDTDWVSNRHGLILSFEDAAGRHYQAAVFPETMCKAGWNKEYTIDALYRKAGY---RGKRPRNATKTPSTMPSSDAAPPDTDPSGGTAAADHDGHAHDPVVSRTAVLLRFQTVSFRMGFCKY 832
            M SH  S  PS   +LSKSIT+ IAS L L+    + E  N KA       P ID DVLLSYYAH + HRPSSRLLKE    R     RSA LLV GSP FERPWR P +A   G         N  RS+S P+     RPKT       R ++       S G +RR S     +  E+    S+   R++ +  Q  ++AG   Q    + SR     G  +  TP   +S +  T      P+P   P           V AE+               D +R+  P A        E+P   L KRP TAP+      E+    P   + GV+    + +T  ++   + A   PG  + R  N       T  +  S+RS        D D  G  V  T       D  A  RP  T    TP   A   T+  I FDA     S ++ RPST A   RR +IE DAALSRSS LP + + +  S   E G T+   S+ G   G  +   GG +  + S  G S     S+++ G  TC TWT+   PGD  +LD     ++  +   S         NGA  G GWGG DQ                 M R+AAAPK   A GR+Q   LAA     E++RPDTRE+ Y AP+  LK+ +PC RCFDALM H R G    EL   R+  W S A   DPHVA F+RWE++D+ L R++PTGF GSFTP PFRPALAEYAVKAA +DPKFWGLGWAQIPDTRC           +H+ DW+S+RHGLILSF+D AGRH Q+ +FPET+CKAGWNKE  I+A+Y+KAGY   R KR  N +K     P+         P+    A   D  + DPVVS TAV+LRF+TVSFRMGF  Y
Sbjct:    1 MFSHASSAFPSSFSELSKSITNKIASHLKLSG--NKPEVPNYKADGDAQTPPTIDPDVLLSYYAHAAAHRPSSRLLKENMFGRRLNGPRSANLLVSGSPIFERPWRAPERAPGRG---------NKRRSSSAPSFGVAYRPKTAATLQSRRHLKD------SSGNHRRSSHSLGRVSEEEHVLLSAGGQRQRVKRTQRHEQAGEASQEIAGWRSR-----GVPKASTPARIKSSLSATPAEVLPPIPYGDPPP---------VTAEDHAEQGGLGEGGPGHEDCSRSAAPAA--------EEPAETLSKRPLTAPSAVTLSSERACRRPLGCDVGVDEAANEATTKPTSG--ETAAALPGWGSCRSFNDGDRRSSTKKSIRSRRSXXXXXRSIDADRIGDIVCRTTPDQHAGDRMA--RPRTTPAGATPGVAASFRTSERILFDAQPGPSSLLSRRPSTTAPPSRRLTIETDAALSRSSLLPLATAASAHSLSFERGNTILGKSVFGGSGGSPR--AGGSSNCDLSTAGRSCEDWFSSSLSG-TTCATWTKRWHPGDSDDLDGGGVSVYGESSWQSGGVAAAWTNNGAATGAGWGGGDQNQTTCVVPLCMSLDDSQMDRMAAAPKSVAAFGRKQRGILAAGGGADEDRRPDTREQCYGAPIEVLKSFHPCVRCFDALMGHLRDGTGAQEL--RRRTPWGSTAVAGDPHVAFFIRWETMDRRLGRFVPTGFRGSFTPSPFRPALAEYAVKAAIEDPKFWGLGWAQIPDTRC-----------KHERDWLSHRHGLILSFKDDAGRHCQSTLFPETICKAGWNKERAIEAMYQKAGYWRPRKKRSENPSKPLVATPTPSERKRHLFPTPTVVA---DPASDDPVVSGTAVMLRFETVSFRMGFGTY 842          
BLAST of mRNA_C-linearis_contig90.16756.1 vs. uniprot
Match: A0A168E3E0_CORFA (Ammecr1 family protein n=1 Tax=Cordyceps fumosorosea (strain ARSEF 2679) TaxID=1081104 RepID=A0A168E3E0_CORFA)

HSP 1 Score: 84.0 bits (206), Expect = 4.900e-14
Identity = 53/159 (33.33%), Postives = 73/159 (45.91%), Query Frame = 0
Query:  631 SSVAATRDPHVALFVRWESLDKDL----------------ERYIPTGFAGSFTPRPFRPALAEYA-VKAAQDPKFWGLGWAQIPDTRCMVTVVKSLEVAQHDTDWVSNRHGLILSFEDAAGRHYQAAVFPETMCKAGWNKEYTIDALYRKAGYRGKRPR 772
            SS+         LFV W +LD                   +     G  G+F  +P    L EYA + A QD +F  +  +++   +  VT++   E A    DW   RHG+ LSF DAAGR Y A   P+   + GW KE T+ +L RKAG+ G R R
Sbjct:   84 SSLTPANITSAPLFVTWNTLDNASPDDPDPXXXXXXXXXDDGVSLRGCIGTFESQPLAEGLPEYALISALQDTRFPPVTASELSTLQVAVTLLTDFEEAADALDWEVGRHGIRLSFRDAAGRRYGATYLPDIAAEQGWTKEETLFSLARKAGWTGSRAR 242          
BLAST of mRNA_C-linearis_contig90.16756.1 vs. uniprot
Match: Q4N2T9_THEPA (AMMECR1 domain-containing protein n=1 Tax=Theileria parva TaxID=5875 RepID=Q4N2T9_THEPA)

HSP 1 Score: 71.2 bits (173), Expect = 2.920e-10
Identity = 52/171 (30.41%), Postives = 80/171 (46.78%), Query Frame = 0
Query:  602 CFRCFDALMHHSRGGVEGDELGRHRQAMWSSVA--ATRDPHVALFVRWESLDKDLERYIPTGFAGSFTPRPFRPALAEYA-VKAAQDPKFWGLGWAQIPDTRCMVTVVKSLEVAQHDTDWVSNRHGLILSFEDAAGRHYQAAVFPETMCKAGWNKEYTIDALYRKAGYRGK 769
            C  CFDAL          +EL   +      +A   ++D    LFV W   + D E     G  G+  P      L +YA + A QD +F  +   +I +  C ++++ S E  +   DW   +HGL++ F D+ G  Y A   PE   +   +KEY ++ L RK+GYRG+
Sbjct:   17 CVVCFDALE---------EELNNKKPESRECLAKLTSQDARCPLFVTWNLKNGDDEDL--RGCIGTLEPTSLNN-LKKYARMSAFQDSRFPPIRSKEIQNLICKLSLLHSYEECKDYLDWEIGKHGLVVEF-DSNGFSYSATYLPEVALEHNMSKEYAVEQLIRKSGYRGR 174          
BLAST of mRNA_C-linearis_contig90.16756.1 vs. uniprot
Match: A0A7S2AKX2_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2AKX2_9STRA)

HSP 1 Score: 56.2 bits (134), Expect = 4.840e-6
Identity = 25/46 (54.35%), Postives = 31/46 (67.39%), Query Frame = 0
Query:  723 HGLILSFEDAAGRHYQAAVFPETMCKAGWNKEYTIDALYRKAGYRG 768
            HG+ +SFED   R Y  +  P+   + GW+KE TIDAL RKAGYRG
Sbjct:    4 HGIAISFEDYKHRVYGGSFLPDVPTRCGWDKEETIDALIRKAGYRG 49          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig90.16756.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D7FTC2_ECTSI1.640e-14442.37AMMECR1 domain-containing protein n=1 Tax=Ectocarp... [more]
A0A6H5J567_9PHAE2.320e-13239.71AMMECR1 domain-containing protein n=1 Tax=Ectocarp... [more]
A0A168E3E0_CORFA4.900e-1433.33Ammecr1 family protein n=1 Tax=Cordyceps fumosoros... [more]
Q4N2T9_THEPA2.920e-1030.41AMMECR1 domain-containing protein n=1 Tax=Theileri... [more]
A0A7S2AKX2_9STRA4.840e-654.35Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002733AMMECR1 domainPFAMPF01871AMMECR1coord: 632..770
e-value: 2.5E-17
score: 63.0
IPR002733AMMECR1 domainPROSITEPS51112AMMECR1coord: 590..799
score: 12.314
NoneNo IPR availablePANTHERPTHR13016:SF0ALPORT SYNDROME, MENTAL RETARDATION, MIDFACE HYPOPLASIA AND ELLIPTOCYTOSIS CHROMOSOMAL REGION GENE 1 HOMOLOG (HUMAN)coord: 602..773
IPR023473AMMECR1PANTHERPTHR13016AMMECR1 HOMOLOGcoord: 602..773
IPR036071AMMECR1 domain superfamilySUPERFAMILY143447AMMECR1-likecoord: 629..772

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig90contigC-linearis_contig90:67119..72585 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig90.16756.1mRNA_C-linearis_contig90.16756.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig90 67119..72585 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig90.16756.1 ID=prot_C-linearis_contig90.16756.1|Name=mRNA_C-linearis_contig90.16756.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=841bp
MISHIGSVLPSGLRDLSKSITSTIASQLSLAPVETRVEPNNTKAPAIDVD
VLLSYYAHFSEHRPSSRLLKERLSKDSRSAKLLVPGSPAFERPWRVPNQA
ARGGHCTIATMHDNNSRSTSVPTSSAEARPKTTVASTGGRFVRGKVETNK
SLGPNRRVSDRHICHEQKGSYSSQPHRRQQQEKQMPKEAGSMPQTAEAYG
SRSEGSMGGGREGTPKTARSGMEDTQPLPQIQPTEAAVVVQAAVVVAENR
DAARAREPLARRDDEETHEKPKGLLPKRPSTAPALFEKLLHLPEHYNAGV
ERGGVQGSTPASTAREDPATPTPGCDAARPLNGSTSHLGTSSAGESKRSD
NDSEGSSVGHTPQKLRERDLPAEPRPHGTFTTTTPAKDAEQLTATSIFDA
DLDLISPVNLRPSTAEAQRRRSIEVDAALSRSSRLPPSCSLTVGSEAGFT
LSTGSMIGEQLGDGKNCGGGKATGNGSMPGFSDSRSSSTAVLGRATCTTW
TQWRRPGDLGELDLRADLLHCTNRRGSRRQVLGRATNGAVAGVGWGGNDQ
MMRVAAAPKVSRAAGREQHRTLAANPVEEQRPDTRERFYDAPVGHLKALN
PCFRCFDALMHHSRGGVEGDELGRHRQAMWSSVAATRDPHVALFVRWESL
DKDLERYIPTGFAGSFTPRPFRPALAEYAVKAAQDPKFWGLGWAQIPDTR
CMVTVVKSLEVAQHDTDWVSNRHGLILSFEDAAGRHYQAAVFPETMCKAG
WNKEYTIDALYRKAGYRGKRPRNATKTPSTMPSSDAAPPDTDPSGGTAAA
DHDGHAHDPVVSRTAVLLRFQTVSFRMGFCKYQRAKAAHA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002733AMMECR1_domain
IPR023473AMMECR1
IPR036071AMMECR1_dom_sf