mRNA_C-linearis_contig9.16640.1 (mRNA) Chordaria linearis ClinC8C monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-linearis_contig9.16640.1
Unique NamemRNA_C-linearis_contig9.16640.1
TypemRNA
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Homology
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BLAST of mRNA_C-linearis_contig9.16640.1 vs. uniprot
Match: A0A6H5JE62_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JE62_9PHAE)

HSP 1 Score: 531 bits (1368), Expect = 5.150e-179
Identity = 340/564 (60.28%), Postives = 379/564 (67.20%), Query Frame = 2 
Query:   20 PAAGSRRAR-HSCSAVIVVCSILAAAAPCVVGFQVAAPPTSCSSSSGERGASGLRVAR-RIHQARQRAPAAGTPLHEEVDRRLRRWELALLAEREDGADGGGQEQQVSPPTDVQGAPAAAAAEAAMPVREAAPRRYVGDGAGMADEGGVGGPKGDGRGKEWTVDLCSKRLSLLHRKLRQVKSLQAQQARDPDSLDAAQRVKLGRKQNLATEIAELEALRRDLRVREWERGSTSSAPPNTKEKKSRLPPGPFAGVNANAAGDDRRQQEGTNESEEDEGAEYTRDGLRLASPKRPVQPPKPAANKANEAEPTGGQQAGPS--------SLGDADLFADGPVGDVSAMADLIKASLDGQEDDIDAEGGGDGGFDWEEGYEDMEGQVAXXXXXXXXXXXXRMSPSEAAASGGGAARGAEGGQEPVLPMVEAPAGGYPKRLAGLMSFCRVSDKATCEILVEMGRVTVNGEVAKDPGIKVDLLTDIIVANGVAVTFPGKIDNSDETRKPRDDVGKRTGPIPKAEKNTWKQKTKYRWSMDDGLLAKRTRRAANAKSFEKKRRSGGG-YDDW 1678
            P AG  RAR H C A + +C+ L   +P   GF  AAP TS SS    R     R+A  R HQAR+R  ++   +  E   R R W   LLAE  DG DG G EQ    P +V+ A  A    +A P+   APRRYVGDGAGMADEGGVGGPKGDGRGKEWTVDLC KRLSLLHRKLRQVKSLQAQQAR PDSLD AQRVKLGRKQ L  EI+ELEALRRDLR +EWE    S+ P   + KKSRLPPGPFA  NA   G D RQ +     EED+GAEYTRDGLRLASPKR +                                SLGDADLF+DG  G V AM  LIK S+DGQ+ + +    GDGGF+WEEG+ED                                A G+  G+E   PMVEA AGGYPKRLAGLMSFCRVSDKATCEILVEMGRVTVNG VA+DPGIKVDLLTDI+VANGVAVTFPGKIDNSDETR+PR+D GKRTGPIPKAEKNTWKQKTKYRW MDDGLLAKRTRRAANAK+F+KKR++GGG +D+W
Sbjct:    9 PKAGVTRARRHPCVAFVALCACLIWRSPSACGFHFAAPRTS-SSGHQRRATLPPRLALGRPHQARRRRLSSACAISREGGARRREW--LLLAEHVDG-DGHGPEQPEPHPAEVRRA--AGTVTSAPPL---APRRYVGDGAGMADEGGVGGPKGDGRGKEWTVDLCCKRLSLLHRKLRQVKSLQAQQARAPDSLDDAQRVKLGRKQTLLAEISELEALRRDLRQKEWESDGASAGP--KENKKSRLPPGPFAAANAAGGGHDTRQHQ----PEEDDGAEYTRDGLRLASPKRRLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLGDADLFSDGGGGGVLAMEALIKPSMDGQDWEKEE---GDGGFNWEEGFED--------------------------------AGGSSEGREEARPMVEALAGGYPKRLAGLMSFCRVSDKATCEILVEMGRVTVNGVVARDPGIKVDLLTDIVVANGVAVTFPGKIDNSDETRRPREDAGKRTGPIPKAEKNTWKQKTKYRWGMDDGLLAKRTRRAANAKAFDKKRQTGGGGFDNW 522
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BLAST of mRNA_C-linearis_contig9.16640.1 vs. uniprot
Match: D7FYC7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYC7_ECTSI)

HSP 1 Score: 402 bits (1033), Expect = 2.050e-131
Identity = 243/369 (65.85%), Postives = 262/369 (71.00%), Query Frame = 2 
Query:  440 MADEGGVGGPKGDGRGKEWTVDLCSKRLSLLHRKLRQVKSLQAQQARDPDSLDAAQRVKLGRKQNLATEIAELEALRRDLRVREWERGSTSSAPPNTKEKKSRLPPGPFAGVNANAAGDDRRQQEGTNESEEDEGAEYTRDGLRLASPKRPVQPPKPAANKAN---------EAEPTGGQQAGPS-SLGDADLFADGPVGDVSAMADLIKASLDGQEDDIDAEGGGDGGFDWEEGYEDMEGQVAXXXXXXXXXXXXRMSPSEAAASGGGAARGAEGGQEPVLPMVEAPAGGYPKRLAGLMSFCRVSDKATCEILVEMGRVTVNGEVAKDPGIKVDLLTDIIVANGVAVTFPGKIDNSDETRKPRDDVGK 1516
            MADEGGVGGPKGDGRGKEWTVDLC KRLSLLHRKLRQVKSLQAQQARDPDSLD AQRVKLGRKQ L TEI+ELEALRRDLR +EWE    S+ P   KEKKSRLPPGPFA  NA   G D RQ +     EED+GAEYTRDGLRLASPKR VQ                    A   G   A PS SLGDADLF+DG  G VSAM  LIK+S+DGQ+ + +    GDGGF+WEEG+ED                                A G+  G+E   PMVEAPAGGYPKRLAGLMSFCRVSDKATCEILVEMGRVTVNG VA+DPGIKVDLLTDI+VANGVAVTFPG IDNSDETR+PR+D GK
Sbjct:    1 MADEGGVGGPKGDGRGKEWTVDLCCKRLSLLHRKLRQVKSLQAQQARDPDSLDDAQRVKLGRKQTLLTEISELEALRRDLRQKEWESDGASAGP---KEKKSRLPPGPFAAANAAGGGHDTRQHQ----LEEDDGAEYTRDGLRLASPKRQVQXXXXXXXXXXXXXXXXSRPSAGTPGAAAAVPSPSLGDADLFSDGDGGGVSAMEALIKSSMDGQDWEKEE---GDGGFNWEEGFED--------------------------------AGGSSEGREEARPMVEAPAGGYPKRLAGLMSFCRVSDKATCEILVEMGRVTVNGVVARDPGIKVDLLTDIVVANGVAVTFPGTIDNSDETRRPREDAGK 327
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BLAST of mRNA_C-linearis_contig9.16640.1 vs. uniprot
Match: A0A835YSP6_9STRA (S4 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSP6_9STRA)

HSP 1 Score: 113 bits (282), Expect = 7.990e-24
Identity = 61/119 (51.26%), Postives = 78/119 (65.55%), Query Frame = 2 
Query: 1280 GYPKRLAGLMSFCRVSDKATCEILVEMGRVTVNGEVAKDPGIKVDLLTDIIVANGVAVTFPGKIDNS------DETRKPRDDVGKRTGPIPKAEK-NTWKQKTKYRWSMDDGLLAKRTR 1615
            G PK+L  ++S+CRVS + TCE+LV +GRVTVNGEV  +   KVD+L D I+ANG  V  P K DN+      DE         KRTGP+PK+EK  TWKQ TKY W +D GL+A++ R
Sbjct:  166 GLPKKLGTVLSYCRVSTRETCEMLVAIGRVTVNGEVVTNADKKVDILNDEIIANGARVEIPDKFDNTFSAPPVDEGEARPRGGKKRTGPLPKSEKPKTWKQLTKYTWKVDGGLMARKVR 284
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BLAST of mRNA_C-linearis_contig9.16640.1 vs. uniprot
Match: A0A4D9D3K9_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D3K9_9STRA)

HSP 1 Score: 64.3 bits (155), Expect = 2.320e-7
Identity = 32/62 (51.61%), Postives = 42/62 (67.74%), Query Frame = 2 
Query: 1277 GGYPKRLAGLMSFCRVSDKATCEILVEMGRVTVNGEVAKDPGIKVDLLTDIIVANGVAVTFP 1462
            G  P+ +  L+ +CR+SDKATCEIL+E+G+V VNG V  DP   VDL+ D I  +G  VT P
Sbjct:  175 GRIPRTILKLLVYCRLSDKATCEILLELGKVKVNGVVCDDPVALVDLVKDKIEFDGEPVTLP 236
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BLAST of mRNA_C-linearis_contig9.16640.1 vs. uniprot
Match: A0A0G4HKE4_9ALVE (SAP domain-containing protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4HKE4_9ALVE)

HSP 1 Score: 59.3 bits (142), Expect = 3.030e-5
Identity = 25/62 (40.32%), Postives = 39/62 (62.90%), Query Frame = 2 
Query: 1286 PKRLAGLMSFCRVSDKATCEILVEMGRVTVNGEVAKDPGIKVDLLTDIIVANGVAVTFPGKI 1471
            PK+L   +++CR+SD   C +L+EMG V+VNG++ K P   V+L+ D IV     V  P ++
Sbjct: 1206 PKKLGTALTYCRISDSKGCRLLIEMGLVSVNGQIVKSPSTPVNLMRDKIVVKDEPVELPSRL 1267
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig9.16640.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A6H5JE62_9PHAE5.150e-17960.28Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FYC7_ECTSI2.050e-13165.85Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835YSP6_9STRA7.990e-2451.26S4 domain-containing protein n=1 Tax=Tribonema min... [more]
A0A4D9D3K9_9STRA2.320e-751.61Uncharacterized protein n=2 Tax=Monodopsidaceae Ta... [more]
A0A0G4HKE4_9ALVE3.030e-540.32SAP domain-containing protein n=1 Tax=Chromera vel... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig9contigC-linearis_contig9:2263861..2268873 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Properties
Property NameValue
Hectar predicted targeting categorychloroplast
Exons6
Model size2267
Cds size1665
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig9.16640.1prot_C-linearis_contig9.16640.1Chordaria linearis ClinC8C monoicouspolypeptideC-linearis_contig9 2264447..2268857 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930747.3869128-UTR-C-linearis_contig9:2263860..22644461622930747.3869128-UTR-C-linearis_contig9:2263860..2264446Chordaria linearis ClinC8C monoicousUTRC-linearis_contig9 2263861..2264446 -
1690881228.660181-UTR-C-linearis_contig9:2263860..22644461690881228.660181-UTR-C-linearis_contig9:2263860..2264446Chordaria linearis ClinC8C monoicousUTRC-linearis_contig9 2263861..2264446 -
1622930747.4803407-UTR-C-linearis_contig9:2268857..22688731622930747.4803407-UTR-C-linearis_contig9:2268857..2268873Chordaria linearis ClinC8C monoicousUTRC-linearis_contig9 2268858..2268873 -
1690881228.7379827-UTR-C-linearis_contig9:2268857..22688731690881228.7379827-UTR-C-linearis_contig9:2268857..2268873Chordaria linearis ClinC8C monoicousUTRC-linearis_contig9 2268858..2268873 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930747.3986912-CDS-C-linearis_contig9:2264446..22646111622930747.3986912-CDS-C-linearis_contig9:2264446..2264611Chordaria linearis ClinC8C monoicousCDSC-linearis_contig9 2264447..2264611 -
1690881228.6718109-CDS-C-linearis_contig9:2264446..22646111690881228.6718109-CDS-C-linearis_contig9:2264446..2264611Chordaria linearis ClinC8C monoicousCDSC-linearis_contig9 2264447..2264611 -
1622930747.4101279-CDS-C-linearis_contig9:2264891..22649651622930747.4101279-CDS-C-linearis_contig9:2264891..2264965Chordaria linearis ClinC8C monoicousCDSC-linearis_contig9 2264892..2264965 -
1690881228.683345-CDS-C-linearis_contig9:2264891..22649651690881228.683345-CDS-C-linearis_contig9:2264891..2264965Chordaria linearis ClinC8C monoicousCDSC-linearis_contig9 2264892..2264965 -
1622930747.4233444-CDS-C-linearis_contig9:2265611..22664131622930747.4233444-CDS-C-linearis_contig9:2265611..2266413Chordaria linearis ClinC8C monoicousCDSC-linearis_contig9 2265612..2266413 -
1690881228.6927514-CDS-C-linearis_contig9:2265611..22664131690881228.6927514-CDS-C-linearis_contig9:2265611..2266413Chordaria linearis ClinC8C monoicousCDSC-linearis_contig9 2265612..2266413 -
1622930747.4348943-CDS-C-linearis_contig9:2266728..22668181622930747.4348943-CDS-C-linearis_contig9:2266728..2266818Chordaria linearis ClinC8C monoicousCDSC-linearis_contig9 2266729..2266818 -
1690881228.7044885-CDS-C-linearis_contig9:2266728..22668181690881228.7044885-CDS-C-linearis_contig9:2266728..2266818Chordaria linearis ClinC8C monoicousCDSC-linearis_contig9 2266729..2266818 -
1622930747.4508023-CDS-C-linearis_contig9:2267504..22677171622930747.4508023-CDS-C-linearis_contig9:2267504..2267717Chordaria linearis ClinC8C monoicousCDSC-linearis_contig9 2267505..2267717 -
1690881228.7167773-CDS-C-linearis_contig9:2267504..22677171690881228.7167773-CDS-C-linearis_contig9:2267504..2267717Chordaria linearis ClinC8C monoicousCDSC-linearis_contig9 2267505..2267717 -
1622930747.467534-CDS-C-linearis_contig9:2268536..22688571622930747.467534-CDS-C-linearis_contig9:2268536..2268857Chordaria linearis ClinC8C monoicousCDSC-linearis_contig9 2268537..2268857 -
1690881228.7277396-CDS-C-linearis_contig9:2268536..22688571690881228.7277396-CDS-C-linearis_contig9:2268536..2268857Chordaria linearis ClinC8C monoicousCDSC-linearis_contig9 2268537..2268857 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-linearis_contig9.16640.1

>prot_C-linearis_contig9.16640.1 ID=prot_C-linearis_contig9.16640.1|Name=mRNA_C-linearis_contig9.16640.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=555bp
MPAAGSRRARHSCSAVIVVCSILAAAAPCVVGFQVAAPPTSCSSSSGERG
ASGLRVARRIHQARQRAPAAGTPLHEEVDRRLRRWELALLAEREDGADGG
GQEQQVSPPTDVQGAPAAAAAEAAMPVREAAPRRYVGDGAGMADEGGVGG
PKGDGRGKEWTVDLCSKRLSLLHRKLRQVKSLQAQQARDPDSLDAAQRVK
LGRKQNLATEIAELEALRRDLRVREWERGSTSSAPPNTKEKKSRLPPGPF
AGVNANAAGDDRRQQEGTNESEEDEGAEYTRDGLRLASPKRPVQPPKPAA
NKANEAEPTGGQQAGPSSLGDADLFADGPVGDVSAMADLIKASLDGQEDD
IDAEGGGDGGFDWEEGYEDMEGQVAAATAAATAAAVARMSPSEAAASGGG
AARGAEGGQEPVLPMVEAPAGGYPKRLAGLMSFCRVSDKATCEILVEMGR
VTVNGEVAKDPGIKVDLLTDIIVANGVAVTFPGKIDNSDETRKPRDDVGK
RTGPIPKAEKNTWKQKTKYRWSMDDGLLAKRTRRAANAKSFEKKRRSGGG
YDDW*
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mRNA from alignment at C-linearis_contig9:2263861..2268873-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-linearis_contig9.16640.1 ID=mRNA_C-linearis_contig9.16640.1|Name=mRNA_C-linearis_contig9.16640.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=5013bp|location=Sequence derived from alignment at C-linearis_contig9:2263861..2268873- (Chordaria linearis ClinC8C monoicous)
CACAAACGTTGTAACCATGCCAGCGGCAGGCTCGAGGAGAGCGAGACATT
CATGTAGCGCGGTGATCGTGGTATGTTCCATCCTTGCAGCAGCTGCACCC
TGTGTAGTTGGCTTCCAAGTCGCCGCGCCTCCCACGAGCTGCAGCAGCAG
CAGTGGGGAACGTGGGGCCTCCGGCCTCCGCGTAGCACGGCGGATCCACC
AAGCAAGACAGCGGGCTCCGGCTGCTGGTACCCCTCTGCACGAGGAAGTT
GACCGGCGTTTGCGACGGTGGGAGCTGGCGTTGTTGGCTGAGCGGGAGGA
CGGCGCTGATGGGGGTGGACAAGAGCAGCAGGTTTCGGTGAGTGTGCGAT
ACGTAGTCTTTGACACCTCTGCGAGTTCAACATGACAGCAGTTGACGAGA
GGTGCCCCGGCTTGCTTGTTCGCGTTGTGGGTGGAGTTTAGGGCGAACAT
CTAATGGTCGGTTTTTATGTATTTATCACTCCTTCCTTTGTTGCTGTGGC
AGGCTGTCTTCACGGAAGCTTTTTTTTGTCATGTTTGGTCTGGAATTTGG
ACCTCATGTGTAGATAGGGAGATAGATACTGTATAGACTACCACGAGCTC
AGAACTAAAACATTTTCTACGTTAAAAAAAAGTGATCACCTATGTGGCAC
GACCCGCCTTTCAGGGTGGCTCTCCAGAATATACTCCGGAGTGCTATTTA
TGACAGCACTCTGCCGCTGCCGAAAGTGGTACACCACGTGGGATATGTAT
GTAGCTGAGGGTAAGGTTGTCTGTGCCCCGTAAACTTTTCAAGCACACCT
CCTACCATAAGTGCTCTGTCTGTGGTATGCTGTCCCTAGTTTCTACCGTG
AGAATTCCGACGTTACTCCGTCCCCGAAAGTTTGCTTGGGTACGATGGTC
TTCACCGACCACGCGGCCGTACGCGACGCTACAGTAAACCTCTCTTCCCT
GAATCTTGTGGACAAGTGATGAGTCAATGTTCAAATTTCTCCGATATATA
CCCCGATAGAACTGTGGGAAGGTCCCAAGCGATGCCCAAGGATCGCGTGT
ACCCTTGCGCAACTAGACAACGATGCAGAATGCCGAGCTCTGTTTTTCAT
TTTACATTGGCCTTTTGATGCTGTACAACACCCCCCGTCTCCCTTGCCAA
CCGCAGCCTCCCACAGACGTTCAAGGCGCACCGGCCGCAGCAGCAGCAGA
AGCAGCAATGCCGGTAAGGGAAGCAGCCCCTCGGCGGTATGTGGGCGACG
GCGCCGGCATGGCCGACGAGGGAGGGGTAGGCGGCCCTAAGGGGGACGGG
CGGGGCAAGGAATGGACGGTGGACCTCTGCAGCAAGCGGCTGTCACTGCT
GCACCGAAAGCTCCGGCAGGTAAAAAATGGAAGAGAACGAGAGAAACGGA
GACTAGAGGGTGCTGAAAGGAAAATATAGCTGGCAATCTGTCTAGTCTCG
TGGCTTAGAATGCCAGATACCTAGAGGGAATGCTACCGCATGGGGCTGCC
CTTGCTGCACCGCCAACACTTGCGAGCGAGAAAGGTTGCAGTAAATAGCG
GGTCATTTCATCTACCCTTTGTCTTTGTGCGTGAACCGTTCGACTTTGCC
ATGAGATGATTTTTCGCCTTCCACAGCGAGTAGGCCCAGTTGTCAGCCCC
AACTCTTTTGCATGAACCTCCGACGATGGCAGAGCATCAGCTATACCCTT
GAAGCTATTGCTGCACCATGAGATGAAAGGTCTACGCTTCTTGCCGTGAA
CCGGTCAGCCTTGAAGCTTGGAAAGAGTAGATACACCCTTCTGCCACGAA
AACCATGGCCAGTCTATGTGCGAATCAAGCGCTGTGGTACATACTTGGAA
GCGTCGTTTTTTGTGCAACCACAGAAGCTTGCGAACATGCCGACGAAAAG
TGATTCCGTCCTTACTCCTCTTTTCTCCATCACACACAGAGTAGTAGCGT
GCATCGCGATACGAGTCCCACGAGTGCTTGTTCGAATATCCTCTGACCGA
TATTGATCACCACTCCTCACGTCATACCTGTTGAAAATAATTTGATGCGC
GGCAGGTCAAGAGCCTGCAGGCGCAGCAGGCCAGAGACCCCGACTCCCTT
GACGCCGCACAACGAGTCAAGCTGGGGAGAAAACAGAACCTGGCGGTGAG
TGTCCGGGGGGTACTACTGGTGTGTCATCAAACAGGAGGGCGGGCAGGCG
AGTTCTCGCTCTTCAAGAGGGTAGGGTAGAGAAGGGCCTAGCAGGAAAGG
CCGCCGTGGACGATGGTGTCCTGGTACCAAAGTCCTCGAGAATACGTCCC
ACGGTTTTTAGCCTTGGTTGTACCACAGTGGGCATCTCGTTCGCCCCCTG
GGTTCGAATGCAGTACCCAATGCCTACCCAACATCCCCCATTTTCTCTTA
TCGTGGTGCCGCTGACCCCTCCCATCGCGCGCACCGTCCACACGTTTATT
TTTTCAAAAGACGGAAATAGCCGAGCTCGAGGCGCTGAGGAGAGACCTGC
GAGTGAGAGAGTGGGAGAGAGGCAGCACCTCCTCGGCACCGCCGAACACG
AAAGAGAAGAAATCGCGGTTGCCGCCAGGCCCGTTCGCCGGCGTCAACGC
TAACGCCGCCGGCGACGACCGCCGGCAGCAGGAGGGGACAAACGAATCCG
AGGAGGATGAAGGCGCGGAGTACACCCGTGACGGGCTTCGGCTCGCTTCG
CCCAAGCGCCCGGTGCAACCACCCAAGCCCGCGGCGAATAAGGCGAACGA
GGCGGAGCCAACCGGAGGGCAGCAAGCAGGGCCTTCCTCCCTCGGGGACG
CAGATTTATTCGCGGACGGCCCCGTCGGAGACGTCAGCGCGATGGCGGAC
TTAATAAAGGCTTCCCTAGACGGGCAGGAGGACGACATCGACGCAGAAGG
AGGCGGCGACGGCGGGTTTGACTGGGAGGAGGGGTACGAGGACATGGAGG
GGCAGGTGGCCGCGGCGACGGCGGCGGCGACGGCGGCGGCGGTGGCTCGA
ATGTCTCCGTCGGAAGCGGCGGCCAGCGGTGGCGGCGCCGCGCGAGGCGC
GGAGGGAGGGCAGGAGCCGGTTCTGCCGATGGTTGAGGCTCCCGCGGGGG
GTTACCCGAAGCGCCTGGCCGGGTTGATGAGCTTCTGCCGAGTTTCGGAC
AAGGCGACCTGCGAGATCCTCGTGGAGATGGGCAGGGTGACGGTGAATGG
GGAAGTGGCGAAAGACCCCGGGATCAAGGTGGACCTCCTGACGGATATCA
TCGTGGCCAATGGTGAGAATTCGGATGGTGATTATTGTGTTGATTTTGGC
GAAAGTCGTTTTTTTTTTTTTTTCTCGCCCATTAATGTTTTTTCGTAGCC
TGCCTCCTCCTCTTCACTACAACTAGCTAGGCTACCGTCCGGGGTCACAC
AGGAGGGGATGTCTCCACCTACCTCCTGCGGTGCATGCCTTTGATGCTTT
TTATCGCTCTATGTGCGGGCGGAATGGCTTGAAAGAGGGAGGACAGCAGT
TATTGTTTTGTTTTGGTAGAGATGAAATAGATAAAACATTCTGATCCATG
GTTTTGCATTGGGTTTATCCGTCCGTTTGTTTTTTTCTTCGTTTTTGGGC
GTTGAAGGTTTGAGCCTGGTTTTGAAGCAACAAATCGCGATGATTACCCT
CACGGCCGTTCAGAATACCACGGCCACACAAGCTCCGGGGTATGTATGTC
AAACTTCCGAGGCAAGCGGCAAGTGTGGCCTGCACCTTCTCCTTGCCGTC
GTCGACCCAAGCATGATCGTGCCACGCCCCGGCTCTGCCGCTTCTCGGTC
GGTCTTTAGCGCTGCTCTGCGGCCACGGATGACGCTAAGCGCCCCCCACC
CCCCCTCCTCCTCCCCCTCCCCTCGTTTGTTTTCTCGTTGTGACGTGTGA
TCGCTTAGGGGTGGCGGTGACCTTCCCCGGAAAGATCGACAACTCGGACG
AGACGCGGAAACCCAGGGACGACGTGGGCAAGGCAAGGAAGGCAAACCAC
CGGCCTCTTTGTTTTTGTGCTGGGGCGGCCAGCTCGGTCGCGTTCGCTCC
TTTTTTTATACGGATGGGTTCTTTGGGTCTCTCTTGATACGGGGTCAGCA
ATAGCTTCAATTATGGGGGTGATCCGTCTTGATTCTCTTGATTTCCTTTC
AAAGACATACAAACCTATGTACGTACATGAGACAGGCTCTTTGCAACGTG
GATCACAGCACCATACCCCACCCAACCCGCTTCCTCCCTGTGCCCCGCCC
TCCGGCCTGCAGCGCACCGGGCCGATCCCGAAAGCGGAGAAGAACACCTG
GAAGCAGAAAACCAAGTACCGCTGGAGCATGGACGACGGCTTGCTGGCCA
AGCGCACGAGACGAGCGGCGAACGCCAAGTCGTTCGAGAAGAAGCGCCGG
AGTGGCGGCGGGTACGACGATTGGTGATCGTTTTCGGCCCGACCGGAGCT
CGCAAGGAAAAGGGCGCGGCTCTGGGTGTTCGAGAAAAGGTTGCCCATGT
GCCGGCCGGCGGTGGGAGTGTTTTTTTAGTGAAGTGAGGAGTTTGGCGTT
GGTTGGTCGTGGGAAGATGCCAGGGGAAGGTATCGTGGGTTTTGCGTGAT
GGGTGGTGCATCTAATTTTGGCTCTTTTGTCATGGTGGACAATCGACACT
TCTTTTGAGCCTTTTGGGCGTGTGACAGACCGTCGGGTCAAATAGTGTTC
CTCATCGCGCCCTCTATACGTTAGGTTGACGTTTTCTCTTGTATTACGTA
GAGGTGGCCTGAACCGTGGATCCGTTTTCCTTCCCTGTTGGTAGTGTACC
ATGGAGCATAATCGTTTTGTGGCCGAAGGGGGCGAGGGAGGTGAAGTTTT
TTTGCGGGTTTGGCGAAATCTGACTCTCCCTCCGGACCATCCACGCCAGA
CCCTCCTTCTGGTGCTCCATGAGGAGGGCGGTCTCCAGAACGGGGCCGGT
GTTGGGCGGAAGTCTGCGGCGTCGGCAGCTGCGGCGAGCTGGCGTCGAGC
TTGTCGAACTTCT
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Coding sequence (CDS) from alignment at C-linearis_contig9:2263861..2268873-

>mRNA_C-linearis_contig9.16640.1 ID=mRNA_C-linearis_contig9.16640.1|Name=mRNA_C-linearis_contig9.16640.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=3330bp|location=Sequence derived from alignment at C-linearis_contig9:2263861..2268873- (Chordaria linearis ClinC8C monoicous)
ATGCCAGCGGCAGGCTCGAGGAGAGCGAGACATTCATGTAGCGCGGTGAT
CGTGGTATGTTCCATCCTTGCAGCAGCTGCACCCTGTGTAGTTGGCTTCC
AAGTCGCCGCGCCTCCCACGAGCTGCAGCAGCAGCAGTGGGGAACGTGGG
GCCTCCGGCCTCCGCGTAGCACGGCGGATCCACCAAGCAAGACAGCGGGC
TCCGGCTGCTGGTACCCCTCTGCACGAGGAAGTTGACCGGCGTTTGCGAC
GGTGGGAGCTGGCGTTGTTGGCTGAGCGGGAGGACGGCGCTGATGGGGGT
GGACAAGAGCAGCAGGTTTCGATGCCAGCGGCAGGCTCGAGGAGAGCGAG
ACATTCATGTAGCGCGGTGATCGTGGTATGTTCCATCCTTGCAGCAGCTG
CACCCTGTGTAGTTGGCTTCCAAGTCGCCGCGCCTCCCACGAGCTGCAGC
AGCAGCAGTGGGGAACGTGGGGCCTCCGGCCTCCGCGTAGCACGGCGGAT
CCACCAAGCAAGACAGCGGGCTCCGGCTGCTGGTACCCCTCTGCACGAGG
AAGTTGACCGGCGTTTGCGACGGTGGGAGCTGGCGTTGTTGGCTGAGCGG
GAGGACGGCGCTGATGGGGGTGGACAAGAGCAGCAGGTTTCGCCTCCCAC
AGACGTTCAAGGCGCACCGGCCGCAGCAGCAGCAGAAGCAGCAATGCCGG
TAAGGGAAGCAGCCCCTCGGCGGTATGTGGGCGACGGCGCCGGCATGGCC
GACGAGGGAGGGGTAGGCGGCCCTAAGGGGGACGGGCGGGGCAAGGAATG
GACGGTGGACCTCTGCAGCAAGCGGCTGTCACTGCTGCACCGAAAGCTCC
GGCAGCCTCCCACAGACGTTCAAGGCGCACCGGCCGCAGCAGCAGCAGAA
GCAGCAATGCCGGTAAGGGAAGCAGCCCCTCGGCGGTATGTGGGCGACGG
CGCCGGCATGGCCGACGAGGGAGGGGTAGGCGGCCCTAAGGGGGACGGGC
GGGGCAAGGAATGGACGGTGGACCTCTGCAGCAAGCGGCTGTCACTGCTG
CACCGAAAGCTCCGGCAGGTCAAGAGCCTGCAGGCGCAGCAGGCCAGAGA
CCCCGACTCCCTTGACGCCGCACAACGAGTCAAGCTGGGGAGAAAACAGA
ACCTGGCGGTCAAGAGCCTGCAGGCGCAGCAGGCCAGAGACCCCGACTCC
CTTGACGCCGCACAACGAGTCAAGCTGGGGAGAAAACAGAACCTGGCGAC
GGAAATAGCCGAGCTCGAGGCGCTGAGGAGAGACCTGCGAGTGAGAGAGT
GGGAGAGAGGCAGCACCTCCTCGGCACCGCCGAACACGAAAGAGAAGAAA
TCGCGGTTGCCGCCAGGCCCGTTCGCCGGCGTCAACGCTAACGCCGCCGG
CGACGACCGCCGGCAGCAGGAGGGGACAAACGAATCCGAGGAGGATGAAG
GCGCGGAGTACACCCGTGACGGGCTTCGGCTCGCTTCGCCCAAGCGCCCG
GTGCAACCACCCAAGCCCGCGGCGAATAAGGCGAACGAGGCGGAGCCAAC
CGGAGGGCAGCAAGCAGGGCCTTCCTCCCTCGGGGACGCAGATTTATTCG
CGGACGGCCCCGTCGGAGACGTCAGCGCGATGGCGGACTTAATAAAGGCT
TCCCTAGACGGGCAGGAGGACGACATCGACGCAGAAGGAGGCGGCGACGG
CGGGTTTGACTGGGAGGAGGGGTACGAGGACATGGAGGGGCAGGTGGCCG
CGGCGACGGCGGCGGCGACGGCGGCGGCGGTGGCTCGAATGTCTCCGTCG
GAAGCGGCGGCCAGCGGTGGCGGCGCCGCGCGAGGCGCGGAGGGAGGGCA
GGAGCCGGTTCTGCCGATGGTTGAGGCTCCCGCGGGGGGTTACCCGAAGC
GCCTGGCCGGGTTGATGAGCTTCTGCCGAGTTTCGGACAAGGCGACCTGC
GAGATCCTCGTGGAGATGGGCAGGGTGACGGTGAATGGGGAAGTGGCGAA
AGACCCCGGGATCAAGGTGGACCTCCTGACGGATATCATCGTGGCCAATG
ACGGAAATAGCCGAGCTCGAGGCGCTGAGGAGAGACCTGCGAGTGAGAGA
GTGGGAGAGAGGCAGCACCTCCTCGGCACCGCCGAACACGAAAGAGAAGA
AATCGCGGTTGCCGCCAGGCCCGTTCGCCGGCGTCAACGCTAACGCCGCC
GGCGACGACCGCCGGCAGCAGGAGGGGACAAACGAATCCGAGGAGGATGA
AGGCGCGGAGTACACCCGTGACGGGCTTCGGCTCGCTTCGCCCAAGCGCC
CGGTGCAACCACCCAAGCCCGCGGCGAATAAGGCGAACGAGGCGGAGCCA
ACCGGAGGGCAGCAAGCAGGGCCTTCCTCCCTCGGGGACGCAGATTTATT
CGCGGACGGCCCCGTCGGAGACGTCAGCGCGATGGCGGACTTAATAAAGG
CTTCCCTAGACGGGCAGGAGGACGACATCGACGCAGAAGGAGGCGGCGAC
GGCGGGTTTGACTGGGAGGAGGGGTACGAGGACATGGAGGGGCAGGTGGC
CGCGGCGACGGCGGCGGCGACGGCGGCGGCGGTGGCTCGAATGTCTCCGT
CGGAAGCGGCGGCCAGCGGTGGCGGCGCCGCGCGAGGCGCGGAGGGAGGG
CAGGAGCCGGTTCTGCCGATGGTTGAGGCTCCCGCGGGGGGTTACCCGAA
GCGCCTGGCCGGGTTGATGAGCTTCTGCCGAGTTTCGGACAAGGCGACCT
GCGAGATCCTCGTGGAGATGGGCAGGGTGACGGTGAATGGGGAAGTGGCG
AAAGACCCCGGGATCAAGGTGGACCTCCTGACGGATATCATCGTGGCCAA
TGGGGTGGCGGTGACCTTCCCCGGAAAGATCGACAACTCGGACGAGACGC
GGAAACCCAGGGACGACGTGGGCAAGGGGTGGCGGTGACCTTCCCCGGAA
AGATCGACAACTCGGACGAGACGCGGAAACCCAGGGACGACGTGGGCAAG
CGCACCGGGCCGATCCCGAAAGCGGAGAAGAACACCTGGAAGCAGAAAAC
CAAGTACCGCTGGAGCATGGACGACGGCTTGCTGGCCAAGCGCACGAGAC
GAGCGGCGAACGCCAAGTCGTTCGAGAAGAAGCGCCGGAGTGGCGGCGGG
TACGACGATTGGTGACGCACCGGGCCGATCCCGAAAGCGGAGAAGAACAC
CTGGAAGCAGAAAACCAAGTACCGCTGGAGCATGGACGACGGCTTGCTGG
CCAAGCGCACGAGACGAGCGGCGAACGCCAAGTCGTTCGAGAAGAAGCGC
CGGAGTGGCGGCGGGTACGACGATTGGTGA
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