mRNA_C-linearis_contig9.16474.1 (mRNA) Chordaria linearis ClinC8C monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-linearis_contig9.16474.1
Unique NamemRNA_C-linearis_contig9.16474.1
TypemRNA
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Homology
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BLAST of mRNA_C-linearis_contig9.16474.1 vs. uniprot
Match: D7G2X6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G2X6_ECTSI)

HSP 1 Score: 190 bits (483), Expect = 7.640e-58
Identity = 100/141 (70.92%), Postives = 113/141 (80.14%), Query Frame = 1 
Query:  202 MSFAMALRFILVGACWGCTTPFIKDGTLAKLEETSGADGNSSEATVAEKTRLGKLLAPLRSLASLKAAVPFALNQSGSTLFYYLLSSEDISTAVPVCNALSLVFTAATAAVLGEKVDRPLQMLSGMVLVLAGLAMCVASKA 624
            M  + AL F+ VGACWGCTTPFIKDGT +KLE  +       + T  E  RLGKL  PLRSLAS+KAA+PF LNQSGSTLFYYLLSS+D+STAVPVCNALSLVFTAATA  LGEKVDRPL+ +SG+VL L GLA+CVASKA
Sbjct:    1 MPLSTALSFVAVGACWGCTTPFIKDGTSSKLEPDT-----QQQPTTNENNRLGKLFGPLRSLASVKAAIPFLLNQSGSTLFYYLLSSQDVSTAVPVCNALSLVFTAATAMALGEKVDRPLRTVSGIVLALMGLAVCVASKA 136
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BLAST of mRNA_C-linearis_contig9.16474.1 vs. uniprot
Match: A0A7S2V8D6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V8D6_9STRA)

HSP 1 Score: 109 bits (273), Expect = 2.660e-26
Identity = 68/147 (46.26%), Postives = 88/147 (59.86%), Query Frame = 1 
Query:  202 MSFAMALRFILVGACWGCTTPFIKDGTLAKLEETS-GADGNSSEATVAEKTR------LGKLLAPLRSLASLKAAVPFALNQSGSTLFYYLLSSEDISTAVPVCNALSLVFTAATAAVLGEKVDRPLQMLSGMVLVLAGLAMCVASK 621
            M    A+ FILVGA WGCTTPF++ GT    EET    D  ++E    +  R      + KL  PL  L   +AA+ + LNQ GS L+YYLLSS+DIS AVP+CN+L+LVFTA T  VLG  V    +   G+ LV+ G+ +CV S 
Sbjct:    1 MEMQTAVFFILVGAMWGCTTPFMRTGT----EETEKNKDDPATETRPVQNERKVAAGGIAKLFEPLLRLLRPQAALAYGLNQGGSLLYYYLLSSQDISLAVPICNSLTLVFTALTEWVLGTAVRDTWKSALGISLVIFGVTICVLSN 143
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BLAST of mRNA_C-linearis_contig9.16474.1 vs. uniprot
Match: A0A448Z7G1_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z7G1_9STRA)

HSP 1 Score: 109 bits (273), Expect = 2.660e-26
Identity = 54/134 (40.30%), Postives = 90/134 (67.16%), Query Frame = 1 
Query:  220 LRFILVGACWGCTTPFIKDGTLAKLEETSGADGNSSEATVAEKTRLGKLLAPLRSLASLKAAVPFALNQSGSTLFYYLLSSEDISTAVPVCNALSLVFTAATAAVLGEKVDRPLQMLSGMVLVLAGLAMCVASK 621
            L  +LVGA WGCT P ++ G+    E +S    ++S+      +    L++ LRS A++   +P+ LNQSGS +FY LL++ DIS AVP+CNA++L+F+  T+++LGE + +PL+  +G  L++ G+A+CV+S+
Sbjct:    9 LSMLLVGALWGCTNPLLRKGSSDAEESSSAKRPDASDDGSXXDSSSSFLVSSLRSFANVGVWLPYVLNQSGSIVFYVLLANSDISMAVPICNAMALLFSFLTSSLLGEPIQKPLRTGAGAFLIMVGVAICVSSQ 142
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BLAST of mRNA_C-linearis_contig9.16474.1 vs. uniprot
Match: A0A7S1UNM3_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1UNM3_9STRA)

HSP 1 Score: 107 bits (268), Expect = 1.820e-25
Identity = 59/141 (41.84%), Postives = 86/141 (60.99%), Query Frame = 1 
Query:  202 MSFAMALRFILVGACWGCTTPFIKDGTLAKLEETSGADGNSSEATVAEKTRLGKLLAPLRSLASLKAAVPFALNQSGSTLFYYLLSSEDISTAVPVCNALSLVFTAATAAVLGEKVDRPLQMLSGMVLVLAGLAMCVASKA 624
            M   + L  ILVGA WGCT P ++ G+ A  E T  A+G  S ++         LL  L    + K  +P+ LNQSGS L+Y LL++ D++ AVP+CNALSLVF+  T+ +LGE+VD+PL+   G  +V+ G+ +CV   +
Sbjct:    1 MELKIILSLILVGAFWGCTNPLLRKGSTA--EATDAAEGEHSSSS---------LLTTLSRFRNWKVWLPYLLNQSGSLLYYVLLANSDLTLAVPICNALSLVFSMGTSHLLGERVDKPLRAGLGAAMVMMGVTLCVTKTS 130
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BLAST of mRNA_C-linearis_contig9.16474.1 vs. uniprot
Match: A0A225WLS3_9STRA (Putative membrane protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WLS3_9STRA)

HSP 1 Score: 106 bits (264), Expect = 4.420e-25
Identity = 62/134 (46.27%), Postives = 84/134 (62.69%), Query Frame = 1 
Query:  220 LRFILVGACWGCTTPFIKDGTLAKLEETSGADGNSSEATVAEKTRLGKLLAPLRSLASLKAAVPFALNQSGSTLFYYLLSSEDISTAVPVCNALSLVFTAATAAVLGEKVDRPLQMLSGMVLVLAGLAMCVASK 621
            L F+ VGA WGCT P IK G+   +  T  ++      +V E    GK L  L  + + +  +PFALNQSGS ++ YLL S DIS AVP+CN+L+ VFTA T+ +LGEK  RP+   +GM L+L G+A+C  SK
Sbjct:    9 LSFLFVGALWGCTNPLIKRGSNDSVMYTRKSN------SVGE---FGKQLIGL--VKNWQFVLPFALNQSGSVVYVYLLGSADISNAVPICNSLTFVFTAITSRLLGEKPQRPVSTYTGMFLILLGVAICFDSK 131
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BLAST of mRNA_C-linearis_contig9.16474.1 vs. uniprot
Match: D0MUD0_PHYIT (Uncharacterized protein n=11 Tax=Phytophthora TaxID=4783 RepID=D0MUD0_PHYIT)

HSP 1 Score: 105 bits (262), Expect = 8.260e-25
Identity = 62/134 (46.27%), Postives = 82/134 (61.19%), Query Frame = 1 
Query:  220 LRFILVGACWGCTTPFIKDGTLAKLEETSGADGNSSEATVAEKTRLGKLLAPLRSLASLKAAVPFALNQSGSTLFYYLLSSEDISTAVPVCNALSLVFTAATAAVLGEKVDRPLQMLSGMVLVLAGLAMCVASK 621
            L F+ VGA WGCT P IK G+   +  T   D +  E T   K  +G +        + +  +PFALNQSGS ++ YLL S DIS AVP+CN+L+ VFTA T+ +LGEK  RP    +GMVL+L G+A+C  SK
Sbjct:    9 LSFLFVGALWGCTNPLIKRGSNDDVMYTR-KDNSIGEFT---KQAVGIVK-------NWQFVLPFALNQSGSVVYVYLLGSADISNAVPICNSLTFVFTAITSRLLGEKPQRPASTYTGMVLILLGVAICFNSK 131
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BLAST of mRNA_C-linearis_contig9.16474.1 vs. uniprot
Match: M4C2Y1_HYAAE (Uncharacterized protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4C2Y1_HYAAE)

HSP 1 Score: 104 bits (259), Expect = 2.420e-24
Identity = 60/132 (45.45%), Postives = 82/132 (62.12%), Query Frame = 1 
Query:  226 FILVGACWGCTTPFIKDGTLAKLEETSGADGNSSEATVAEKTRLGKLLAPLRSLASLKAAVPFALNQSGSTLFYYLLSSEDISTAVPVCNALSLVFTAATAAVLGEKVDRPLQMLSGMVLVLAGLAMCVASK 621
            F++VGA WGCT PFIK G+   +  T        + ++ E T  G     +  + + K  +PFALNQSGS ++ YLL S DIS AVP+CN+L+ VFTA T+ +LGEK  RP+    GM LVL G+A+C  S+
Sbjct:   11 FLIVGALWGCTNPFIKRGSNDDVMYTR------KDNSMKEFTNQG-----IGVVKNWKFVLPFALNQSGSVVYVYLLGSADISHAVPICNSLTFVFTAITSRLLGEKPQRPICTYMGMALVLLGVAICFDSQ 131
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BLAST of mRNA_C-linearis_contig9.16474.1 vs. uniprot
Match: A0A5D6XQ34_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XQ34_9STRA)

HSP 1 Score: 103 bits (257), Expect = 4.280e-24
Identity = 61/134 (45.52%), Postives = 81/134 (60.45%), Query Frame = 1 
Query:  220 LRFILVGACWGCTTPFIKDGTLAKLEETSGADGNSSEATVAEKTRLGKLLAPLRSLASLKAAVPFALNQSGSTLFYYLLSSEDISTAVPVCNALSLVFTAATAAVLGEKVDRPLQMLSGMVLVLAGLAMCVASK 621
            L F+ VGA WGCT P IK G        S AD   S A  +    L +LL  +++    +  VPF LNQSGS  + YLL S +IS+AVP+CN+L+ VFTA T+ +LGE   RP+   +GMVL+L G+ +C  SK
Sbjct:    6 LSFLFVGALWGCTNPLIKRG--------SAADLTYSRANNSPAEFLRQLLHWIKNW---RFVVPFVLNQSGSAAYVYLLGSAEISSAVPICNSLTFVFTAITSRLLGEAPKRPIWTYTGMVLILLGVLICFDSK 128
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BLAST of mRNA_C-linearis_contig9.16474.1 vs. uniprot
Match: G4Z987_PHYSP (Uncharacterized protein n=3 Tax=Phytophthora TaxID=4783 RepID=G4Z987_PHYSP)

HSP 1 Score: 103 bits (257), Expect = 4.650e-24
Identity = 60/134 (44.78%), Postives = 82/134 (61.19%), Query Frame = 1 
Query:  220 LRFILVGACWGCTTPFIKDGTLAKLEETSGADGNSSEATVAEKTRLGKLLAPLRSLASLKAAVPFALNQSGSTLFYYLLSSEDISTAVPVCNALSLVFTAATAAVLGEKVDRPLQMLSGMVLVLAGLAMCVASK 621
            L F+ VGA WGCT P IK G+ A +  T     NS E        + K L  L  + + +  +PFALNQSGS  + +LL S D+S AVP+CN+L+ VFTA T+ +LGE+  RP+   +GM L+L G+A+C  SK
Sbjct:    9 LSFLFVGALWGCTNPLIKRGSDADVMYTR--KDNSLE-------EMKKQLLDL--MKNWQFLLPFALNQSGSVAYVFLLGSTDVSNAVPICNSLAFVFTAITSRLLGEQPQRPISTYTGMTLILTGVAICFDSK 131
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BLAST of mRNA_C-linearis_contig9.16474.1 vs. uniprot
Match: A0A2D4C7R2_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C7R2_PYTIN)

HSP 1 Score: 103 bits (257), Expect = 5.500e-24
Identity = 62/135 (45.93%), Postives = 85/135 (62.96%), Query Frame = 1 
Query:  220 LRFILVGACWGCTTPFIKDGTLAKLEETSGADGNSSEATVAEKTRLGKLLAPLRSLASLKAAVPFALNQSGSTLFYYLLSSEDISTAVPVCNALSLVFTAATAAVLGEKVDRPLQMLSGMVLVLAGLAMCVASKA 624
            L F+LV A WGCT P IK GT ++    S AD   +    + K  L + L  +R+    +  VPF LNQSGS  F +LL+S +IS+AVP+CN+L+ VFTA T+ VLGE   RPL   +G+ L+LAG+ +C  +KA
Sbjct:    7 LSFLLVSALWGCTNPLIKRGT-SQSPAGSRADAVYTRRDNSVKEWLAQALHWIRNW---QFVVPFLLNQSGSVAFVHLLASAEISSAVPICNSLTFVFTAITSRVLGEVPRRPLWTYTGVALILAGVFVCFQAKA 137
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig9.16474.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G2X6_ECTSI7.640e-5870.92Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S2V8D6_9STRA2.660e-2646.26Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
A0A448Z7G1_9STRA2.660e-2640.30Uncharacterized protein n=1 Tax=Pseudo-nitzschia m... [more]
A0A7S1UNM3_9STRA1.820e-2541.84Hypothetical protein n=1 Tax=Grammatophora oceanic... [more]
A0A225WLS3_9STRA4.420e-2546.27Putative membrane protein n=1 Tax=Phytophthora meg... [more]
D0MUD0_PHYIT8.260e-2546.27Uncharacterized protein n=11 Tax=Phytophthora TaxI... [more]
M4C2Y1_HYAAE2.420e-2445.45Uncharacterized protein n=1 Tax=Hyaloperonospora a... [more]
A0A5D6XQ34_9STRA4.280e-2445.52Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
G4Z987_PHYSP4.650e-2444.78Uncharacterized protein n=3 Tax=Phytophthora TaxID... [more]
A0A2D4C7R2_PYTIN5.500e-2445.93Uncharacterized protein n=1 Tax=Pythium insidiosum... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig9contigC-linearis_contig9:382095..386026 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score192.2
Seed ortholog evalue1.7e-46
Seed eggNOG ortholog2880.D7G2X6
Preferred nameTMEM234
Hectar predicted targeting categorysignal peptide
EggNOG free text desc.Putative transmembrane family 234
EggNOG OGsKOG4831@1,KOG4831@2759
Ec32 ortholog descriptionUncharacterised protein family UPF0546
Ec32 orthologEc-09_004560.1
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons3
Model size820
Cds size426
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig9.16474.1prot_C-linearis_contig9.16474.1Chordaria linearis ClinC8C monoicouspolypeptideC-linearis_contig9 382288..385825 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930714.6293638-UTR-C-linearis_contig9:382094..3822871622930714.6293638-UTR-C-linearis_contig9:382094..382287Chordaria linearis ClinC8C monoicousUTRC-linearis_contig9 382095..382287 -
1690881211.4788663-UTR-C-linearis_contig9:382094..3822871690881211.4788663-UTR-C-linearis_contig9:382094..382287Chordaria linearis ClinC8C monoicousUTRC-linearis_contig9 382095..382287 -
1622930714.6950676-UTR-C-linearis_contig9:385825..3860261622930714.6950676-UTR-C-linearis_contig9:385825..386026Chordaria linearis ClinC8C monoicousUTRC-linearis_contig9 385826..386026 -
1690881211.532869-UTR-C-linearis_contig9:385825..3860261690881211.532869-UTR-C-linearis_contig9:385825..386026Chordaria linearis ClinC8C monoicousUTRC-linearis_contig9 385826..386026 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930714.644952-CDS-C-linearis_contig9:382287..3824481622930714.644952-CDS-C-linearis_contig9:382287..382448Chordaria linearis ClinC8C monoicousCDSC-linearis_contig9 382288..382448 -
1690881211.5011268-CDS-C-linearis_contig9:382287..3824481690881211.5011268-CDS-C-linearis_contig9:382287..382448Chordaria linearis ClinC8C monoicousCDSC-linearis_contig9 382288..382448 -
1622930714.6642742-CDS-C-linearis_contig9:385347..3855361622930714.6642742-CDS-C-linearis_contig9:385347..385536Chordaria linearis ClinC8C monoicousCDSC-linearis_contig9 385348..385536 -
1690881211.5144637-CDS-C-linearis_contig9:385347..3855361690881211.5144637-CDS-C-linearis_contig9:385347..385536Chordaria linearis ClinC8C monoicousCDSC-linearis_contig9 385348..385536 -
1622930714.6829517-CDS-C-linearis_contig9:385749..3858251622930714.6829517-CDS-C-linearis_contig9:385749..385825Chordaria linearis ClinC8C monoicousCDSC-linearis_contig9 385750..385825 -
1690881211.524256-CDS-C-linearis_contig9:385749..3858251690881211.524256-CDS-C-linearis_contig9:385749..385825Chordaria linearis ClinC8C monoicousCDSC-linearis_contig9 385750..385825 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-linearis_contig9.16474.1

>prot_C-linearis_contig9.16474.1 ID=prot_C-linearis_contig9.16474.1|Name=mRNA_C-linearis_contig9.16474.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=142bp
MSFAMALRFILVGACWGCTTPFIKDGTLAKLEETSGADGNSSEATVAEKT
RLGKLLAPLRSLASLKAAVPFALNQSGSTLFYYLLSSEDISTAVPVCNAL
SLVFTAATAAVLGEKVDRPLQMLSGMVLVLAGLAMCVASKA*
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mRNA from alignment at C-linearis_contig9:382095..386026-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-linearis_contig9.16474.1 ID=mRNA_C-linearis_contig9.16474.1|Name=mRNA_C-linearis_contig9.16474.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=3932bp|location=Sequence derived from alignment at C-linearis_contig9:382095..386026- (Chordaria linearis ClinC8C monoicous)
GTGTGCGAGATCGTGACAATCAATCGTACCATCGGTGCCATATCGATCAA
CCCATCATCTTCAATCGACGCTCTCAAGCAACAAGTCGAACGACACAGAA
GCAGAGAACAGAGAACATAGAACAGACATCTCTGGCTGGGGAACTGGTTC
CGATTTGCCAGTACTCCCGCGGCCGCAGCAGTCCCTGCTTTCCTGATTTT
GATGTCGTTCGCGATGGCGCTGAGATTCATCCTAGTGGGAGCGTGTTGGG
GGTGCACCACCCCTTTCATCAAAGACGGTGAGGCCGTTGATGTGATACAA
CCAGCAACCAGAGGCAACCAGTCAAATATCAACAGGAGATACGGCTTGAC
ACATTGACATCATGCGAAATTTAGAGTGTTCGACGCGGCAGTTGTCGACG
CAGGCAACCGCTTAGACCGGGCTCTGGTTTAGTTTTGGAGGGTGCTGAGT
GCTAACACCTGAAATATCGGCTGCTCGCACCCTTGCTCAGGAACACTAGC
CAAACTGGAGGAAACAAGCGGGGCGGATGGCAACAGCAGCGAGGCCACGG
TCGCCGAAAAAACGCGACTAGGAAAGCTGCTTGCTCCTCTTCGAAGTCTG
GCGTCGTTGAAAGCTGCGGTGCCATTCGCGCTCAATCAGTCCGGGTCGAC
TCTTTTCTACTATCTGCTCAGCTCGGAAGGTGAATAGGAAATGGGGCGCG
TCATAGTTTCCTCGAATGGCGGGTCAGTGCCATCGCCACAGCGTCTACCC
CTGTTCGTGCAACCGCGTCGGTTAACGTCGACTTGCCATCAGGCTGTCGA
ATGGCTTTATGCTTCGTATATTATCGGTCGTCCCACATCCGCGAGAGAGA
TAGAGAAGAAAGGAAAGGACAATGATCGAGCCTGCCGGTTCATCACACAA
ACAGAGATCCAAGGACACACGCTGTAGTAGAAGAACAGCCCAATGGACCA
GTAATACTGATCACAACAGCCGCGCCTACGAGGTAATAACTAAGGCGAAG
ACAAGAGTACCAGAGATCGCAACGAAACTCGTTCCCTCGGGCATAGGTCT
CCCAGAGCCCCCTACTCCTGCCATAGGTACACAGACCGCGACAGCAGTAA
CGCGAGATGGTATTGTCTTCCTCCGCATGACTTAAACTTAGTAATACCCG
GCGCTAAATAACCAACTCAACTACTTATCATCCAAAAAAGAATCAAAGAG
AAGAATTCATAAACAAAACGATACCAGGTACTGCATTGCCGAAATATCAA
CACGAATATTTACTCCCTGATTCTGACCCTCCCTGATGCTGCAACCAATA
TCGATCTAAACACGATCATCAGCTACAAACGAGAGTATCTGCCAACCAGA
TTTCTTTATATTCAACCAGCATACTTCGAAGTATCAGTATAACCAAAATA
AAATGTACACCCACTCACTGGTATACCTCCGCCTTCGTCTACATGAACCC
TTGATTTCTGTTAAGCATTCTCCTTCTGGTCCTGTTCAAATCAGTCACAT
TTCATCCATGATATCCAAGCTCTTCGATTTAGTACAACAACCAAGAATTG
AACATGGTCAACACTCGCAAAGAAACTCAGCCATCCCTACGAATACCAAC
CCGTCAAACGTTCTCCGCCCGCCTTGCGATTATTACAGTAGCCAAACCTT
TAATGATCCGACTCACGGGAATTACGTTTGATTCCTCCATACTCGTGTTG
CATCCGCCATACTGCTGCTGCTTCGTGGAGTGCGCGTACTACTACTACGC
GGCTTATTGCTTCCAATGCAAATAAATGTGTCCACCCTCGTTCAAAACCG
TTGATCAGACAGCTAACGATGTTCTCCCACGTACTAAACTTCCCTTGCCG
CTGCACAGGGCTACATTTCTCACGGCTGGATAATTACCACCCGTCGTTAA
TCAAATCCCCCATCGCTAAAAACATGCTGAGGCGATACCTACGGCAATGA
ACTTCGGCCGTAGGGTTTTACAGCTGATCCCCCATCGCTACAATTATGCT
GGCCGATACCTACGACAATAACCCTCGGCTGTAGGATTTCTTAGTGGATT
CCCCATCGCTAAAAACATGCTGGGGAGATACCTAAGGCAATGAACTTCGG
CCGTAGGGCTTTTGGTTCTCATTTGATCCCCCATCGGTAAAAACATGCTG
GGGAGATACCTACGGCAATGACCTTCGGCCGTAGAGTTTTTGGTTGCTGG
ATCTTCACGCATTTTCAAACCGCAAAAAGCCCCTACGCTTATATCCCCCG
TCGCTAAAAACATGCCGGGTAGATACTTAAGGCACTTCCGCCGTAGGGTA
GTTGCTGCTCTTCGTAGTCCTTAACTGTATCATCTTCGTTGTCGACGTTC
TTGACTGTTCATCGCGGCTGTTGCTGTCATGCATGCCCGCCATGCCCGCC
TCCACAATCCCTCCCGCTTGCCCAAAGATGGGAGAAACAACCCGCGCTGG
GTTTTCTCCCCGAGAGCGGAGGGATAGCTATCGGTCCAGGATACGCTCGA
CCACAGCAGTCAGAACTTGAGGACTGCTCAACCATTGGGACAAAGCCCCA
TGCTGGTCCTCTGCCGCCAAGCTGATGCAAACACGTCTCAGCCCCCCCAG
CAAACCTTTCTCCTCTACCTTTAGGGCTCTCGTCGTCGCGAGGTTGCATT
GCTCCGACGAGTTTGATGGGGCTGCATCTCCTCCCGCTGCACCACCTACA
GCAGTGGCAGCGCCACGGCCACCGGACTCTCCTTCCGCTTCGCTGGTCTT
CTTCAGCACTACTAGCAGTTCCGACATCATGCTGATCAGCTCCTCGCAGT
GCGTCTCCTCACGTTCCTCAGATTTGCGCTCTCAACACATCAAGCTGCTC
CTCTACGTTGGGGTTCCAGCCATCTCTAGCAGAAGCCATGATCACACAAT
ATTGGCCAAATATTTCTAGAATGTTCGTGCAACCGCGCCGGTTAACGCCG
ACTTGCCACCAGGCTGTCGAATGGCTTTAGAGTATGCTTCGTATATTATC
GGTCGTCCCACATCCGCGAGGGAGATAGAGAAGAAAGGAAAGGAGAGCGA
TCGAGCCTTCCGGTTCATCACACAAACAGAGATCCAAGGACACACGCTGT
AGTAGATGAACAGCCCAAGGACCAGTACTCTCAACTTACTCTCAACCGAC
ACACACACGTAACCGTCACTTTGCGGAGAGATCACACCGACAACCCCTCC
CAGATGACCTCCATGTAGAGGCATGACGAAACCGAGTGGCGTTATTTACG
AGCGAGGGTAGCCACCGGGTAGCACGTATTCCGGTCAGGCCCAGTTAAGG
CAGGGGGGTCAAGTCTATCGATGGTGAGCCCGCACCCACCAGCAAATGAA
CGGCAGCACCGTGTTTCGTTTTTAAGCCCCTTTTGCGTTTCTAAAAGCCG
GTTTGCTCTTTGCGCTGGCTTCAAATGGAAATCGATTGTGGATTCCATGT
CGCGTCGGTGTTGACTGATGGTGTGAACAATGCCACCACGCTATGAATTA
CAACGAAACGCCGTCTGTGATCCTGAACCCCCCATGCCAACTTCACCGCG
TTCCTTGCACGTGCTACCCCTCCGCCAGACATCTCTACGGCGGTGCCCGT
GTGCAATGCGCTGTCGCTCGTGTTCACCGCCGCCACCGCGGCAGTGCTCG
GAGAGAAGGTAGACCGTCCACTCCAAATGTTGTCGGGAATGGTTCTCGTG
CTGGCAGGACTCGCCATGTGCGTCGCTAGCAAGGCATAGCCTCTAGCAAG
GCATAGCCTCTAGCAAGGCATGTTCGTTCCTATCGGCGTTCCGCGGCATG
GATTGCAAATAGCAGTATTCAAGGCTGGATATGCCTACAGAGGGCATGTT
GTTGGGTGCACCCCCAATATGGCGCGTTCGACGATGCCTTAGCTTGACAC
TTTGTATATAGAAGGATGCGGCCGTGGGTGGG
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Coding sequence (CDS) from alignment at C-linearis_contig9:382095..386026-

>mRNA_C-linearis_contig9.16474.1 ID=mRNA_C-linearis_contig9.16474.1|Name=mRNA_C-linearis_contig9.16474.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=852bp|location=Sequence derived from alignment at C-linearis_contig9:382095..386026- (Chordaria linearis ClinC8C monoicous)
ATGTCGTTCGCGATGGCGCTGAGATTCATCCTAGTGGGAGCGTGTTGGGG
GTGCACCACCCCTTTCATCAAAGACGATGTCGTTCGCGATGGCGCTGAGA
TTCATCCTAGTGGGAGCGTGTTGGGGGTGCACCACCCCTTTCATCAAAGA
CGGAACACTAGCCAAACTGGAGGAAACAAGCGGGGCGGATGGCAACAGCA
GCGAGGCCACGGTCGCCGAAAAAACGCGACTAGGAAAGCTGCTTGCTCCT
CTTCGAAGTCTGGCGTCGTTGAAAGCTGCGGTGCCATTCGCGCTCAATCA
GTCCGGGTCGACTCTTTTCTACTATCTGCTCAGCTCGGAAGGAACACTAG
CCAAACTGGAGGAAACAAGCGGGGCGGATGGCAACAGCAGCGAGGCCACG
GTCGCCGAAAAAACGCGACTAGGAAAGCTGCTTGCTCCTCTTCGAAGTCT
GGCGTCGTTGAAAGCTGCGGTGCCATTCGCGCTCAATCAGTCCGGGTCGA
CTCTTTTCTACTATCTGCTCAGCTCGGAAGACATCTCTACGGCGGTGCCC
GTGTGCAATGCGCTGTCGCTCGTGTTCACCGCCGCCACCGCGGCAGTGCT
CGGAGAGAAGGTAGACCGTCCACTCCAAATGTTGTCGGGAATGGTTCTCG
TGCTGGCAGGACTCGCCATGTGCGTCGCTAGCAAGGCATAGACATCTCTA
CGGCGGTGCCCGTGTGCAATGCGCTGTCGCTCGTGTTCACCGCCGCCACC
GCGGCAGTGCTCGGAGAGAAGGTAGACCGTCCACTCCAAATGTTGTCGGG
AATGGTTCTCGTGCTGGCAGGACTCGCCATGTGCGTCGCTAGCAAGGCAT
AG
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