prot_C-linearis_contig9.16474.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig9.16474.1
Unique Nameprot_C-linearis_contig9.16474.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length142
Homology
BLAST of mRNA_C-linearis_contig9.16474.1 vs. uniprot
Match: D7G2X6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G2X6_ECTSI)

HSP 1 Score: 189 bits (480), Expect = 1.920e-59
Identity = 100/141 (70.92%), Postives = 113/141 (80.14%), Query Frame = 0
Query:    1 MSFAMALRFILVGACWGCTTPFIKDGTLAKLEETSGADGNSSEATVAEKTRLGKLLAPLRSLASLKAAVPFALNQSGSTLFYYLLSSEDISTAVPVCNALSLVFTAATAAVLGEKVDRPLQMLSGMVLVLAGLAMCVASKA 141
            M  + AL F+ VGACWGCTTPFIKDGT +KLE  +       + T  E  RLGKL  PLRSLAS+KAA+PF LNQSGSTLFYYLLSS+D+STAVPVCNALSLVFTAATA  LGEKVDRPL+ +SG+VL L GLA+CVASKA
Sbjct:    1 MPLSTALSFVAVGACWGCTTPFIKDGTSSKLEPDT-----QQQPTTNENNRLGKLFGPLRSLASVKAAIPFLLNQSGSTLFYYLLSSQDVSTAVPVCNALSLVFTAATAMALGEKVDRPLRTVSGIVLALMGLAVCVASKA 136          
BLAST of mRNA_C-linearis_contig9.16474.1 vs. uniprot
Match: A0A7S2V8D6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V8D6_9STRA)

HSP 1 Score: 108 bits (271), Expect = 1.090e-27
Identity = 68/147 (46.26%), Postives = 88/147 (59.86%), Query Frame = 0
Query:    1 MSFAMALRFILVGACWGCTTPFIKDGTLAKLEETS-GADGNSSEATVAEKTR------LGKLLAPLRSLASLKAAVPFALNQSGSTLFYYLLSSEDISTAVPVCNALSLVFTAATAAVLGEKVDRPLQMLSGMVLVLAGLAMCVASK 140
            M    A+ FILVGA WGCTTPF++ GT    EET    D  ++E    +  R      + KL  PL  L   +AA+ + LNQ GS L+YYLLSS+DIS AVP+CN+L+LVFTA T  VLG  V    +   G+ LV+ G+ +CV S 
Sbjct:    1 MEMQTAVFFILVGAMWGCTTPFMRTGT----EETEKNKDDPATETRPVQNERKVAAGGIAKLFEPLLRLLRPQAALAYGLNQGGSLLYYYLLSSQDISLAVPICNSLTLVFTALTEWVLGTAVRDTWKSALGISLVIFGVTICVLSN 143          
BLAST of mRNA_C-linearis_contig9.16474.1 vs. uniprot
Match: A0A448Z7G1_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z7G1_9STRA)

HSP 1 Score: 108 bits (269), Expect = 2.200e-27
Identity = 54/134 (40.30%), Postives = 90/134 (67.16%), Query Frame = 0
Query:    7 LRFILVGACWGCTTPFIKDGTLAKLEETSGADGNSSEATVAEKTRLGKLLAPLRSLASLKAAVPFALNQSGSTLFYYLLSSEDISTAVPVCNALSLVFTAATAAVLGEKVDRPLQMLSGMVLVLAGLAMCVASK 140
            L  +LVGA WGCT P ++ G+    E +S    ++S+      +    L++ LRS A++   +P+ LNQSGS +FY LL++ DIS AVP+CNA++L+F+  T+++LGE + +PL+  +G  L++ G+A+CV+S+
Sbjct:    9 LSMLLVGALWGCTNPLLRKGSSDAEESSSAKRPDASDDGSXXDSSSSFLVSSLRSFANVGVWLPYVLNQSGSIVFYVLLANSDISMAVPICNAMALLFSFLTSSLLGEPIQKPLRTGAGAFLIMVGVAICVSSQ 142          
BLAST of mRNA_C-linearis_contig9.16474.1 vs. uniprot
Match: A0A7S1UNM3_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1UNM3_9STRA)

HSP 1 Score: 106 bits (265), Expect = 1.100e-26
Identity = 59/137 (43.07%), Postives = 85/137 (62.04%), Query Frame = 0
Query:    1 MSFAMALRFILVGACWGCTTPFIKDGTLAKLEETSGADGNSSEATVAEKTRLGKLLAPLRSLASLKAAVPFALNQSGSTLFYYLLSSEDISTAVPVCNALSLVFTAATAAVLGEKVDRPLQMLSGMVLVLAGLAMCV 137
            M   + L  ILVGA WGCT P ++ G+ A  E T  A+G  S ++         LL  L    + K  +P+ LNQSGS L+Y LL++ D++ AVP+CNALSLVF+  T+ +LGE+VD+PL+   G  +V+ G+ +CV
Sbjct:    1 MELKIILSLILVGAFWGCTNPLLRKGSTA--EATDAAEGEHSSSS---------LLTTLSRFRNWKVWLPYLLNQSGSLLYYVLLANSDLTLAVPICNALSLVFSMGTSHLLGERVDKPLRAGLGAAMVMMGVTLCV 126          
BLAST of mRNA_C-linearis_contig9.16474.1 vs. uniprot
Match: A0A225WLS3_9STRA (Putative membrane protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WLS3_9STRA)

HSP 1 Score: 104 bits (260), Expect = 3.910e-26
Identity = 62/134 (46.27%), Postives = 84/134 (62.69%), Query Frame = 0
Query:    7 LRFILVGACWGCTTPFIKDGTLAKLEETSGADGNSSEATVAEKTRLGKLLAPLRSLASLKAAVPFALNQSGSTLFYYLLSSEDISTAVPVCNALSLVFTAATAAVLGEKVDRPLQMLSGMVLVLAGLAMCVASK 140
            L F+ VGA WGCT P IK G+   +  T  ++      +V E    GK L  L  + + +  +PFALNQSGS ++ YLL S DIS AVP+CN+L+ VFTA T+ +LGEK  RP+   +GM L+L G+A+C  SK
Sbjct:    9 LSFLFVGALWGCTNPLIKRGSNDSVMYTRKSN------SVGE---FGKQLIGL--VKNWQFVLPFALNQSGSVVYVYLLGSADISNAVPICNSLTFVFTAITSRLLGEKPQRPVSTYTGMFLILLGVAICFDSK 131          
BLAST of mRNA_C-linearis_contig9.16474.1 vs. uniprot
Match: D0MUD0_PHYIT (Uncharacterized protein n=11 Tax=Phytophthora TaxID=4783 RepID=D0MUD0_PHYIT)

HSP 1 Score: 103 bits (258), Expect = 7.400e-26
Identity = 62/134 (46.27%), Postives = 82/134 (61.19%), Query Frame = 0
Query:    7 LRFILVGACWGCTTPFIKDGTLAKLEETSGADGNSSEATVAEKTRLGKLLAPLRSLASLKAAVPFALNQSGSTLFYYLLSSEDISTAVPVCNALSLVFTAATAAVLGEKVDRPLQMLSGMVLVLAGLAMCVASK 140
            L F+ VGA WGCT P IK G+   +  T   D +  E T   K  +G +        + +  +PFALNQSGS ++ YLL S DIS AVP+CN+L+ VFTA T+ +LGEK  RP    +GMVL+L G+A+C  SK
Sbjct:    9 LSFLFVGALWGCTNPLIKRGSNDDVMYTR-KDNSIGEFT---KQAVGIVK-------NWQFVLPFALNQSGSVVYVYLLGSADISNAVPICNSLTFVFTAITSRLLGEKPQRPASTYTGMVLILLGVAICFNSK 131          
BLAST of mRNA_C-linearis_contig9.16474.1 vs. uniprot
Match: M4C2Y1_HYAAE (Uncharacterized protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4C2Y1_HYAAE)

HSP 1 Score: 102 bits (255), Expect = 2.220e-25
Identity = 60/132 (45.45%), Postives = 82/132 (62.12%), Query Frame = 0
Query:    9 FILVGACWGCTTPFIKDGTLAKLEETSGADGNSSEATVAEKTRLGKLLAPLRSLASLKAAVPFALNQSGSTLFYYLLSSEDISTAVPVCNALSLVFTAATAAVLGEKVDRPLQMLSGMVLVLAGLAMCVASK 140
            F++VGA WGCT PFIK G+   +  T        + ++ E T  G     +  + + K  +PFALNQSGS ++ YLL S DIS AVP+CN+L+ VFTA T+ +LGEK  RP+    GM LVL G+A+C  S+
Sbjct:   11 FLIVGALWGCTNPFIKRGSNDDVMYTR------KDNSMKEFTNQG-----IGVVKNWKFVLPFALNQSGSVVYVYLLGSADISHAVPICNSLTFVFTAITSRLLGEKPQRPICTYMGMALVLLGVAICFDSQ 131          
BLAST of mRNA_C-linearis_contig9.16474.1 vs. uniprot
Match: A0A5D6XQ34_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XQ34_9STRA)

HSP 1 Score: 102 bits (253), Expect = 3.990e-25
Identity = 61/134 (45.52%), Postives = 81/134 (60.45%), Query Frame = 0
Query:    7 LRFILVGACWGCTTPFIKDGTLAKLEETSGADGNSSEATVAEKTRLGKLLAPLRSLASLKAAVPFALNQSGSTLFYYLLSSEDISTAVPVCNALSLVFTAATAAVLGEKVDRPLQMLSGMVLVLAGLAMCVASK 140
            L F+ VGA WGCT P IK G        S AD   S A  +    L +LL  +++    +  VPF LNQSGS  + YLL S +IS+AVP+CN+L+ VFTA T+ +LGE   RP+   +GMVL+L G+ +C  SK
Sbjct:    6 LSFLFVGALWGCTNPLIKRG--------SAADLTYSRANNSPAEFLRQLLHWIKNW---RFVVPFVLNQSGSAAYVYLLGSAEISSAVPICNSLTFVFTAITSRLLGEAPKRPIWTYTGMVLILLGVLICFDSK 128          
BLAST of mRNA_C-linearis_contig9.16474.1 vs. uniprot
Match: G4Z987_PHYSP (Uncharacterized protein n=3 Tax=Phytophthora TaxID=4783 RepID=G4Z987_PHYSP)

HSP 1 Score: 102 bits (253), Expect = 4.330e-25
Identity = 60/134 (44.78%), Postives = 82/134 (61.19%), Query Frame = 0
Query:    7 LRFILVGACWGCTTPFIKDGTLAKLEETSGADGNSSEATVAEKTRLGKLLAPLRSLASLKAAVPFALNQSGSTLFYYLLSSEDISTAVPVCNALSLVFTAATAAVLGEKVDRPLQMLSGMVLVLAGLAMCVASK 140
            L F+ VGA WGCT P IK G+ A +  T     NS E        + K L  L  + + +  +PFALNQSGS  + +LL S D+S AVP+CN+L+ VFTA T+ +LGE+  RP+   +GM L+L G+A+C  SK
Sbjct:    9 LSFLFVGALWGCTNPLIKRGSDADVMYTR--KDNSLE-------EMKKQLLDL--MKNWQFLLPFALNQSGSVAYVFLLGSTDVSNAVPICNSLAFVFTAITSRLLGEQPQRPISTYTGMTLILTGVAICFDSK 131          
BLAST of mRNA_C-linearis_contig9.16474.1 vs. uniprot
Match: A0A2D4C7R2_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C7R2_PYTIN)

HSP 1 Score: 102 bits (253), Expect = 5.110e-25
Identity = 63/141 (44.68%), Postives = 87/141 (61.70%), Query Frame = 0
Query:    1 MSFAMALRFILVGACWGCTTPFIKDGTLAKLEETSGADGNSSEATVAEKTRLGKLLAPLRSLASLKAAVPFALNQSGSTLFYYLLSSEDISTAVPVCNALSLVFTAATAAVLGEKVDRPLQMLSGMVLVLAGLAMCVASKA 141
            M+    L F+LV A WGCT P IK GT ++    S AD   +    + K  L + L  +R+    +  VPF LNQSGS  F +LL+S +IS+AVP+CN+L+ VFTA T+ VLGE   RPL   +G+ L+LAG+ +C  +KA
Sbjct:    1 MATTTLLSFLLVSALWGCTNPLIKRGT-SQSPAGSRADAVYTRRDNSVKEWLAQALHWIRNW---QFVVPFLLNQSGSVAFVHLLASAEISSAVPICNSLTFVFTAITSRVLGEVPRRPLWTYTGVALILAGVFVCFQAKA 137          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig9.16474.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G2X6_ECTSI1.920e-5970.92Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S2V8D6_9STRA1.090e-2746.26Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
A0A448Z7G1_9STRA2.200e-2740.30Uncharacterized protein n=1 Tax=Pseudo-nitzschia m... [more]
A0A7S1UNM3_9STRA1.100e-2643.07Hypothetical protein n=1 Tax=Grammatophora oceanic... [more]
A0A225WLS3_9STRA3.910e-2646.27Putative membrane protein n=1 Tax=Phytophthora meg... [more]
D0MUD0_PHYIT7.400e-2646.27Uncharacterized protein n=11 Tax=Phytophthora TaxI... [more]
M4C2Y1_HYAAE2.220e-2545.45Uncharacterized protein n=1 Tax=Hyaloperonospora a... [more]
A0A5D6XQ34_9STRA3.990e-2545.52Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
G4Z987_PHYSP4.330e-2544.78Uncharacterized protein n=3 Tax=Phytophthora TaxID... [more]
A0A2D4C7R2_PYTIN5.110e-2544.68Uncharacterized protein n=1 Tax=Pythium insidiosum... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR018908Putative transmembrane family 234PFAMPF10639TMEM234coord: 9..137
e-value: 5.0E-28
score: 97.5
IPR018908Putative transmembrane family 234PANTHERPTHR28668FAMILY NOT NAMEDcoord: 5..140
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 67..85
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 92..113
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 86..91
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 114..118
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 139..141
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 13..17
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..12
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 119..138
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 18..66
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..17
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..17
score: 0.74
NoneNo IPR availableSUPERFAMILY103481Multidrug resistance efflux transporter EmrEcoord: 67..138

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig9contigC-linearis_contig9:382288..385825 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig9.16474.1mRNA_C-linearis_contig9.16474.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig9 382095..386026 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig9.16474.1 ID=prot_C-linearis_contig9.16474.1|Name=mRNA_C-linearis_contig9.16474.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=142bp
MSFAMALRFILVGACWGCTTPFIKDGTLAKLEETSGADGNSSEATVAEKT
RLGKLLAPLRSLASLKAAVPFALNQSGSTLFYYLLSSEDISTAVPVCNAL
SLVFTAATAAVLGEKVDRPLQMLSGMVLVLAGLAMCVASKA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR018908TMEM234