mRNA_C-linearis_contig9.16470.1 (mRNA) Chordaria linearis ClinC8C monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-linearis_contig9.16470.1
Unique NamemRNA_C-linearis_contig9.16470.1
TypemRNA
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Homology
BLAST of mRNA_C-linearis_contig9.16470.1 vs. uniprot
Match: D7G2X2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2X2_ECTSI)

HSP 1 Score: 327 bits (837), Expect = 3.510e-108
Identity = 169/238 (71.01%), Postives = 193/238 (81.09%), Query Frame = 1
Query:  127 SHHCVTKAAPSSALL---PAHRRRDQGTVLLRLAPQKEQQSEVDVAASSASVSEFEQTSGPVKAFVGGLTDLFVLLSGGENEEEENLPAAAPKASLSVKQLEAGIRQEYVKNYLWTGDINEDLYEEDCSFTDPTLSFSGLSTYKRNVGSLQGVLDRLVYNSRSVLFSCELQQDQSCVQTRWRMVGDLRLPWGPTIDVVGRTTFSYDAGRGHRIFSYDEVWEVEPTEALLQLFRPGTRN 831
            +H C T +A  +  L   P+HR R +    LRLAP++EQ  E D  + S +VSEFEQTSG VKAFVGGLTDLFV  +GG+ + E      + KASLS  +LEAGIRQEY KNYLWTGDINEDLYEEDC+FTDPTLSFSGLSTYKRNVGSLQGVLD  V NSRSVL+SCEL+Q+ SCVQTRWRMVGDLRLPWGPTIDVVGRTTFSYD+ RG+RIFSYDEVWE+E  EAL+Q+FRPGTR+
Sbjct:    2 NHRCCTSSAYWTGGLSAAPSHRYRSRA---LRLAPRQEQ-GEGDTDSHSTAVSEFEQTSGSVKAFVGGLTDLFVRFAGGDEDSEALSADTSAKASLSEAELEAGIRQEYAKNYLWTGDINEDLYEEDCNFTDPTLSFSGLSTYKRNVGSLQGVLDLFVRNSRSVLYSCELRQEDSCVQTRWRMVGDLRLPWGPTIDVVGRTTFSYDSSRGNRIFSYDEVWEMEAAEALMQIFRPGTRD 235          
BLAST of mRNA_C-linearis_contig9.16470.1 vs. uniprot
Match: A0A835YYI6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYI6_9STRA)

HSP 1 Score: 181 bits (460), Expect = 9.640e-52
Identity = 92/191 (48.17%), Postives = 124/191 (64.92%), Query Frame = 1
Query:  259 SSASVSEFEQTSGPVKAFVGGLTDLFVLLSGGENEEEENLPAAAPKASLSVKQLEAGIRQEYV-KNYLWTGDINEDLYEEDCSFTDPTLSFSGLSTYKRNVGSLQGVLDRLVYNSRSVLFSCELQQDQSCVQTRWRMVGDLRLPWGPTIDVVGRTTFSYDAGRGHRIFSYDEVWEVEPTEALLQLFRPGTR 828
            SS +VS++  T G  K  V GLT+ F  +S  + EE            LS +QL  GI++++V K YLWTG I+++LY EDC FTDPTLSF GLST+K+NVGSL+ +++ LV      L SCEL + + CV+ RWRM G ++LPW P +DV+GRT F+YD   G+R+  Y E WE+   EAL+QL  PG R
Sbjct:   31 SSDTVSDYAGTGGIAKGIVSGLTNAFNAISPAKEEE-----VVVKAGKLSPRQLFTGIKEDFVDKRYLWTGLIDDNLYSEDCLFTDPTLSFRGLSTWKKNVGSLRPLVNALVPEFGVDLLSCELNEKEKCVRARWRMWGYIKLPWQPAVDVIGRTRFTYDPAEGNRVVDYFETWELPAGEALMQLVTPGKR 216          
BLAST of mRNA_C-linearis_contig9.16470.1 vs. uniprot
Match: A0A7S4KR88_GUITH (Hypothetical protein n=1 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4KR88_GUITH)

HSP 1 Score: 163 bits (412), Expect = 3.880e-44
Identity = 83/186 (44.62%), Postives = 117/186 (62.90%), Query Frame = 1
Query:  271 VSEFEQTSGPVKAFVGGLTDLF--VLLSGGENEEEENLPAAAPKASLSVKQLEAGIRQEYVKNYLWTGDINEDLYEEDCSFTDPTLSFSGLSTYKRNVGSLQGVLDRLVYNSRSVLFSCELQQDQSCVQTRWRMVGDLRLPWGPTIDVVGRTTFSYDAGRGHRIFSYDEVWEVEPTEALLQLFRPG 822
            +S +E++SG  K  +  LT+L   V+  GGE  EE N         LS++QL+ GI  +Y + YLWTG+I+  LY+E+C FTDPT+SF GL T+++N+ +L+  +D LV +    L+SCEL++    V  RWRM G L LPW P ID+VG T+F +D  RG+RI  Y E WE   +  LL L +PG
Sbjct:   74 ISTYEKSSGVTKFIISSLTELVNAVVGRGGEVPEESNT------RELSLEQLKLGIEDDYRRCYLWTGEIDPSLYDENCKFTDPTISFEGLRTFQKNLANLRPFIDALVKDYDVDLYSCELKEKNQQVVARWRMRGQLALPWRPLIDLVGSTSFKFDPERGNRIVEYRESWETPASTVLLGLLKPG 253          
BLAST of mRNA_C-linearis_contig9.16470.1 vs. uniprot
Match: A0A7S1DMA4_HEMAN (Hypothetical protein n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1DMA4_HEMAN)

HSP 1 Score: 158 bits (399), Expect = 4.060e-42
Identity = 97/251 (38.65%), Postives = 150/251 (59.76%), Query Frame = 1
Query:   85 GVLNLCSL-ATSFAQSHHCVTKAAPSSALLPAHRRRDQGTVLLRLAPQKEQQSEVDVAAS---SASVSEFEQTSGPVKAFVGGLTDLF-VLLSGGENEEEENLPAAAPKASLSVKQLEAGIRQEYVKNYLWTGDINEDLYEEDCSFTDPTLSFSGLSTYKRNVGSLQGVLDRLVYNSRSV-LFSCELQQDQSCVQTRWRMVGDLRLPWGPTIDVVGRTTFSYDAGRGHRIFSYDEVWEVEPTEALLQLFRP 819
            G+L L S   T+F  S+  V+      AL P   R+  G  LLR +  +E++  +++ A+   +   + + Q+S  VKA V GLT+L   ++  GE+  + + P    +  +S ++L  GI+ +Y + YLWTG+I+  LY+ DC FTDPTLSF GL T++ N+ +L+  +D LV +  SV ++ C+L   +  V+  WRMVG L++PW PTID+ G T F+Y   +G+RI  Y EVWE  P++ LLQL  P
Sbjct:   20 GMLVLSSRRGTAFMPSNIPVSNVGLKFALEPRSPRKA-GVELLRTSRGRERKRVLELRAAEEDTTKTTSYGQSSTGVKAIVSGLTNLVNAVMQRGEDPSKLDRPQ---RDDISEQELLEGIKGDYERRYLWTGEIDPYLYDYDCVFTDPTLSFKGLKTFQSNLANLRPFIDFLVQDDCSVEMYGCDLVLGEPQVKASWRMVGRLKVPWTPTIDLNGTTVFTYSPSKGNRIVDYQEVWETPPSKVLLQLLVP 266          
BLAST of mRNA_C-linearis_contig9.16470.1 vs. uniprot
Match: A0A061RRB7_9CHLO (Uncharacterized protein n=2 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061RRB7_9CHLO)

HSP 1 Score: 156 bits (394), Expect = 2.080e-41
Identity = 78/179 (43.58%), Postives = 112/179 (62.57%), Query Frame = 1
Query:  301 VKAFVGGLTDLFVLLSGGENEEEENLPAAAPKASLSVKQLEAGIRQEYVKN-YLWTGDINEDLYEEDCSFTDPTLSFSGLSTYKRNVGSLQGVLDRLVYNSRSVLFSCELQQDQSCVQTRWRMVGDLRLPWGPTIDVVGRTTFSYDAGRGHRIFSYDEVWEVEPTEALLQLFRPGTRND 834
            VK+ V GLT      SG   E  +       +A +S +QL  G+ +++ +N YLW+G I+ +LY  DC+FTDPTLSF GL T++RN+ +LQ  +DRLV N    L   +L +D + V+ RWRM GD++LPWGP I++ GRT F Y+  +G R+  Y E W++   EALLQL RP   ++
Sbjct:   87 VKSIVSGLTKAINWTSGSPPERVDYSTEEDTRAPVSPQQLLWGVEKDFTENGYLWSGAIDTNLYCRDCTFTDPTLSFKGLETFERNLRNLQPWIDRLVRNEVCELIDIQLLEDSNEVRARWRMKGDIQLPWGPQINLTGRTRFCYNPDKGGRVEEYFEEWDISGAEALLQLLRPARTSE 265          
BLAST of mRNA_C-linearis_contig9.16470.1 vs. uniprot
Match: A0A7S0Z2E3_9CRYP (Hypothetical protein n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0Z2E3_9CRYP)

HSP 1 Score: 155 bits (391), Expect = 5.580e-41
Identity = 87/217 (40.09%), Postives = 131/217 (60.37%), Query Frame = 1
Query:  175 AHRRRDQGTVLLRLAPQKEQQSEVDVAASSASVSEFEQTSGPVKAFVGGLTDLF-VLLSGGENEEEENLPAAAPKASLSVKQLEAGIRQEYVKNYLWTGDINEDLYEEDCSFTDPTLSFSGLSTYKRNVGSLQGVLDRLVYNSRSV-LFSCELQQDQSCVQTRWRMVGDLRLPWGPTIDVVGRTTFSYDAGRGHRIFSYDEVWEVEPTEALLQLFRP 819
            A RRR   +VL   A +K+          ++  + + Q+S  VKA V GLT+L   ++  GE+  + N P    +  ++ ++L  GI+ +Y + YLWTGDI+  LY+ +C FTDPTLSF+GL T++ N+ +L+  +D LV    +V ++ C+L   +  V+  WRMVG L++PW PTID+ G T F+Y   +G+RI  Y EVWE  P+E LLQL  P
Sbjct:   60 AARRRTSASVLGLRASEKD----------TSKTTSYGQSSTGVKAIVSGLTNLVNAVMQRGEDPSKLNRPE---RDGITEQELLEGIKGDYERRYLWTGDIDPYLYDYECVFTDPTLSFTGLETFQSNLANLRPFIDFLVQEDCAVEMYGCDLVPGEPRVKASWRMVGRLKVPWTPTIDLNGTTVFTYAPNKGNRIVDYQEVWETPPSEVLLQLLVP 263          
BLAST of mRNA_C-linearis_contig9.16470.1 vs. uniprot
Match: A0A6S9RDB2_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A6S9RDB2_CHRCT)

HSP 1 Score: 157 bits (396), Expect = 1.560e-39
Identity = 81/186 (43.55%), Postives = 116/186 (62.37%), Query Frame = 1
Query:  277 EFEQTSGPVKAFVGGLTDLFVLLSGGENEEEENLPAAAP-KASLSVKQLEAGIRQEYV-KNYLWTGDINEDLYEEDCSFTDPTLSFSGLSTYKRNVGSLQGVLDRLVYNSRSVLFSCELQQDQSCVQTRWRMVGDLRLPWGPTIDVVGRTTFSYDAGRGHRIFSYDEVWEVEPTEALLQLFRPGTR 828
            +F+ TS  V+  V  LT L   +SG   +E   L A +  +  L+  +L  G+R +YV + YLWTGDI+ +LY+ DC FTDPTLSF GLST++RN+ +L+ +LD LV +    L+S     D++ ++  WRM G++ LPW P ID+ G T F+YD  +G+RI  Y E W++    AL QL RPG R
Sbjct:  310 DFQGTSPFVQGVVSSLTALVNAVSGKTMDEPAALEADSELRPPLTPSELLEGVRDDYVARKYLWTGDIDPNLYDSDCVFTDPTLSFKGLSTFQRNIANLKPLLDALVRDPVVDLYSISSTVDETQIKATWRMKGEIALPWAPVIDLTGSTVFTYDPLKGNRITEYTESWDISAASALGQLLRPGAR 495          
BLAST of mRNA_C-linearis_contig9.16470.1 vs. uniprot
Match: R1FIQ6_EMIHU (Uncharacterized protein n=2 Tax=Emiliania huxleyi TaxID=2903 RepID=R1FIQ6_EMIHU)

HSP 1 Score: 142 bits (357), Expect = 1.380e-36
Identity = 83/196 (42.35%), Postives = 116/196 (59.18%), Query Frame = 1
Query:  271 VSEFEQTSGPVKAFVGGLTDLFVLLSGGENEEEENLPAAAPKASLSVKQLEAGIRQEYVKN-YLWTGDINEDLYEEDCSFTDPTLSFSGLSTYKRNVGSLQGVLDRLVY-NSRSV-LFSCELQQDQSCVQTRWRMVGDLRLPWGPTIDVVGRTTFSYDAGRGHRIFSYDEV----------WEVEPTEALLQLFRP 819
            ++E  +TS   +  V  LT L   +SGGE     + P    + SL    + AG+R ++ +N YLW+G I  +LY+EDC+FTDPTLSF+GLST++RN+ +L   ++R V   +RSV L S  L  D + V+  WRM+GDL LPW P +D+ GRT ++   G G RI SYDE           W + P+EAL  L RP
Sbjct:   16 LNEISETSRATRGLVSSLTALVNTISGGE---PPSAPRRREQESLDAGDVLAGLRTDFEENEYLWSGRITAELYDEDCTFTDPTLSFAGLSTFERNLANLDPWIERFVPPTARSVELKSLRLVDDGAAVEAEWRMLGDLALPWRPRLDLGGRTRYTL-GGEGGRISSYDEARARERWHREAWAITPSEALWMLVRP 207          
BLAST of mRNA_C-linearis_contig9.16470.1 vs. uniprot
Match: C1N9A8_MICPC (Predicted protein n=1 Tax=Micromonas pusilla (strain CCMP1545) TaxID=564608 RepID=C1N9A8_MICPC)

HSP 1 Score: 142 bits (358), Expect = 8.820e-36
Identity = 88/212 (41.51%), Postives = 117/212 (55.19%), Query Frame = 1
Query:  274 SEFEQTSGPVKAFVGGLTDLFVLL-------SGGENE------EEENLPAAAPKASLSVKQLEAGIRQEYVK-NYLWTGDINEDLYEEDCSFTDPTLSFSGLSTYKRNVGSLQGVLDRLVYNSRSVLFSCELQQDQS-------------CVQTRWRMVGDLRLPWGPTIDVVGRTTFSY-DAG--RGHRIFSYDEVWEVEPTEALLQLFRP 819
            S++E+TSG VKA V GLT +   +       S G N+      +E       P +      L   I +E+ +  YLWTGDIN ++Y+  C+FTDPTLSF+GL T++ N+ +LQ VL RLV NS   L+SCE+  D S              V+  WRM GDL LPW P ID+ G+TTF + DAG  RG  I SY E W +   +A+ QL  P
Sbjct:   85 SKYEETSGAVKALVSGLTAIVNAVGSVTSSSSSGSNDGAKLTRKERRDARPFPSSPRDATALRDDIAREFTEAKYLWTGDINPEMYDLFCTFTDPTLSFAGLQTFETNLKNLQPVLRRLVRNSNVELYSCEIVDDGSGGXXXXXXXXXXXSVRASWRMTGDLNLPWRPRIDLTGQTTFGFKDAGVERGCLIVSYLEEWGISALDAVAQLVAP 296          
BLAST of mRNA_C-linearis_contig9.16470.1 vs. uniprot
Match: A0A7S2M761_9DINO (Hypothetical protein (Fragment) n=1 Tax=Brandtodinium nutricula TaxID=1333877 RepID=A0A7S2M761_9DINO)

HSP 1 Score: 137 bits (345), Expect = 2.430e-35
Identity = 74/171 (43.27%), Postives = 107/171 (62.57%), Query Frame = 1
Query:  304 KAFVGGLTDLFVLLSGGENEEEENLPAAAPKASLSVKQLEAGIRQEYV-KNYLWTGDINEDLYEEDCSFTDPTLSFSGLSTYKRNVGSLQGVLDRLVYNSRSVLFSCELQQD---QSCVQTRWRMVGDLRLPWGPTIDVVGRTTFSYDAGRGHRIFSYDEVWEVEPTEALL 804
            K+ V GLTDL   + GGE   +E  P    + S++ ++L  GIR+++  + YLW+GDI+ +LY+E C+FTDPTLSF GL  ++RN+ +L+ +LD +V   R       L+++   +  V   W MVGD+ LPWGP I + GRT  +Y  GR  RI SYDE W++   EALL
Sbjct:    8 KSLVSGLTDLVNGVMGGEEAPDE--PRVRRRESVTPEELLEGIREDFEERQYLWSGDIDPELYDEACTFTDPTLSFRGLGAFERNIRNLRPILDAVVPGERRRCILRGLEREAGPRGRVLAEWTMVGDVSLPWGPRIRLSGRT--AYTPGRDGRIVSYDEQWDISAGEALL 174          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig9.16470.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G2X2_ECTSI3.510e-10871.01Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835YYI6_9STRA9.640e-5248.17Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S4KR88_GUITH3.880e-4444.62Hypothetical protein n=1 Tax=Guillardia theta TaxI... [more]
A0A7S1DMA4_HEMAN4.060e-4238.65Hypothetical protein n=1 Tax=Hemiselmis andersenii... [more]
A0A061RRB7_9CHLO2.080e-4143.58Uncharacterized protein n=2 Tax=Tetraselmis sp. GS... [more]
A0A7S0Z2E3_9CRYP5.580e-4140.09Hypothetical protein n=1 Tax=Hemiselmis tepida Tax... [more]
A0A6S9RDB2_CHRCT1.560e-3943.55Hypothetical protein n=1 Tax=Chrysotila carterae T... [more]
R1FIQ6_EMIHU1.380e-3642.35Uncharacterized protein n=2 Tax=Emiliania huxleyi ... [more]
C1N9A8_MICPC8.820e-3641.51Predicted protein n=1 Tax=Micromonas pusilla (stra... [more]
A0A7S2M761_9DINO2.430e-3543.27Hypothetical protein (Fragment) n=1 Tax=Brandtodin... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig9contigC-linearis_contig9:325461..327903 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score333.6
Seed ortholog evalue8.8e-89
Seed eggNOG ortholog2880.D7G2X2
Hectar predicted targeting categorychloroplast
EggNOG free text desc.Uncharacterized conserved protein (DUF2358)
EggNOG OGs2CINV@1,2S3RX@2759
Ec32 ortholog descriptionProtein of unknown function DUF2358
Ec32 orthologEc-09_004600.1
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons5
Model size1195
Cds size816
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930713.8910754-UTR-C-linearis_contig9:325460..3255021622930713.8910754-UTR-C-linearis_contig9:325460..325502Chordaria linearis ClinC8C monoicousUTRC-linearis_contig9 325461..325502 +
1690881211.0753224-UTR-C-linearis_contig9:325460..3255021690881211.0753224-UTR-C-linearis_contig9:325460..325502Chordaria linearis ClinC8C monoicousUTRC-linearis_contig9 325461..325502 +
1622930714.002618-UTR-C-linearis_contig9:327566..3279031622930714.002618-UTR-C-linearis_contig9:327566..327903Chordaria linearis ClinC8C monoicousUTRC-linearis_contig9 327567..327903 +
1690881211.1352952-UTR-C-linearis_contig9:327566..3279031690881211.1352952-UTR-C-linearis_contig9:327566..327903Chordaria linearis ClinC8C monoicousUTRC-linearis_contig9 327567..327903 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930713.9099793-CDS-C-linearis_contig9:325502..3258561622930713.9099793-CDS-C-linearis_contig9:325502..325856Chordaria linearis ClinC8C monoicousCDSC-linearis_contig9 325503..325856 +
1690881211.0870957-CDS-C-linearis_contig9:325502..3258561690881211.0870957-CDS-C-linearis_contig9:325502..325856Chordaria linearis ClinC8C monoicousCDSC-linearis_contig9 325503..325856 +
1622930713.9262288-CDS-C-linearis_contig9:326126..3262221622930713.9262288-CDS-C-linearis_contig9:326126..326222Chordaria linearis ClinC8C monoicousCDSC-linearis_contig9 326127..326222 +
1690881211.096147-CDS-C-linearis_contig9:326126..3262221690881211.096147-CDS-C-linearis_contig9:326126..326222Chordaria linearis ClinC8C monoicousCDSC-linearis_contig9 326127..326222 +
1622930713.9461648-CDS-C-linearis_contig9:326420..3265611622930713.9461648-CDS-C-linearis_contig9:326420..326561Chordaria linearis ClinC8C monoicousCDSC-linearis_contig9 326421..326561 +
1690881211.1057227-CDS-C-linearis_contig9:326420..3265611690881211.1057227-CDS-C-linearis_contig9:326420..326561Chordaria linearis ClinC8C monoicousCDSC-linearis_contig9 326421..326561 +
1622930713.9663584-CDS-C-linearis_contig9:326814..3268721622930713.9663584-CDS-C-linearis_contig9:326814..326872Chordaria linearis ClinC8C monoicousCDSC-linearis_contig9 326815..326872 +
1690881211.1159804-CDS-C-linearis_contig9:326814..3268721690881211.1159804-CDS-C-linearis_contig9:326814..326872Chordaria linearis ClinC8C monoicousCDSC-linearis_contig9 326815..326872 +
1622930713.98291-CDS-C-linearis_contig9:327399..3275661622930713.98291-CDS-C-linearis_contig9:327399..327566Chordaria linearis ClinC8C monoicousCDSC-linearis_contig9 327400..327566 +
1690881211.1267507-CDS-C-linearis_contig9:327399..3275661690881211.1267507-CDS-C-linearis_contig9:327399..327566Chordaria linearis ClinC8C monoicousCDSC-linearis_contig9 327400..327566 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig9.16470.1prot_C-linearis_contig9.16470.1Chordaria linearis ClinC8C monoicouspolypeptideC-linearis_contig9 325503..327566 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-linearis_contig9.16470.1

>prot_C-linearis_contig9.16470.1 ID=prot_C-linearis_contig9.16470.1|Name=mRNA_C-linearis_contig9.16470.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=272bp
MAVNSPWTLVGWVLGVLNLCSLATSFAQSHHCVTKAAPSSALLPAHRRRD
QGTVLLRLAPQKEQQSEVDVAASSASVSEFEQTSGPVKAFVGGLTDLFVL
LSGGENEEEENLPAAAPKASLSVKQLEAGIRQEYVKNYLWTGDINEDLYE
EDCSFTDPTLSFSGLSTYKRNVGSLQGVLDRLVYNSRSVLFSCELQQDQS
CVQTRWRMVGDLRLPWGPTIDVVGRTTFSYDAGRGHRIFSYDEVWEVEPT
EALLQLFRPGTRNDDELLPPE*
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mRNA from alignment at C-linearis_contig9:325461..327903+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-linearis_contig9.16470.1 ID=mRNA_C-linearis_contig9.16470.1|Name=mRNA_C-linearis_contig9.16470.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=2443bp|location=Sequence derived from alignment at C-linearis_contig9:325461..327903+ (Chordaria linearis ClinC8C monoicous)
GTTCTTCTGTCCTGCCTTCCCTCCCGTCCTAAGAGCATTATCATGGCTGT GAACTCACCTTGGACGCTTGTGGGGTGGGTGCTGGGTGTTTTGAATCTTT GCTCACTCGCCACGAGCTTCGCACAAAGCCATCACTGCGTCACGAAAGCG GCACCCTCGTCAGCGTTGTTGCCAGCACACCGCCGTCGAGATCAAGGCAC AGTACTGCTGCGATTGGCTCCCCAAAAGGAGCAGCAGAGCGAGGTCGACG TCGCTGCGAGCAGTGCCAGTGTCTCTGAGTTCGAGCAAACTAGCGGCCCG GTGAAGGCGTTCGTTGGTGGGTTGACCGACTTGTTCGTCCTGCTTTCTGG TGGTGAGAACGAAGAAGAGGAGAATCTTCCGGCGGCCGCCCCAAAGGTAA GAAGCTACGCGCATGGTGCCTTCAGCAGTGATCATTAAATATATCACCCG GCAAAGGTCCTCTCTGGGCCGAAGGTGGAACGCCGCTGGTAGACTACCAT GTGTTCTGTCCTTTTGCCTCCAGGTTGGTTCGGCAACGACCCCGCAGAGA GGTGGAACCCTTTTCGGCATCAAGATACGGAATAGGTACATTTTAGCGTT CCCATTCCAACCGTTCTTGATATTGACTGGAATGAACCTGCGCGTTGGCT AATCTGCAAATCAAAGGCCAGTCTGTCGGTGAAGCAGCTCGAAGCCGGAA TCCGCCAGGAGTACGTGAAAAACTATCTCTGGACAGGAGACATCAACGAA GACTTGTACGAGGTGGGTGGGTATCAACTAGAACTACGGTAGCGCCATTT CTGGGCAGCTTGCTGTGTTTCGTTTATTGCCGCGAACGCCGAAAACAATA GGTTTCCGGGGGCGATCCTCGAAACATCGGCGGAACGCTCTCTGTGTCCA GGCATCAGGCTAAACTGTCTGTGTGTCCCTGTTTTGATTCCGCCCGCCTC AACCTTGCAGGAGGATTGCAGCTTCACCGACCCCACGCTGTCGTTCTCCG GGCTGTCGACGTACAAACGCAACGTGGGCAGCCTGCAGGGCGTGCTGGAT CGGCTCGTTTATAATAGCCGCTCGGTGCTGTTCTCCTGCGAGCTCCAGCA GGTGGAGAATACACAGAAAATACCTGCTTCGATGTTCTTGCCCAGATTTG TTTCGAGTGTTTCTGTTCTCGGACGGCTGTCGTTCGCGCGCATGTTTACC GAACGCCCGATCTCAACAAGCCCCCTTCTAGTTTCGTTATTTGGTTATTT CGCCATTCTGGTTTGTTTGGCATTGGAGCTTTTTCTTGCTTGTTCGTTTC TCCGCTCGTTCTTCGCTTCACCCCACTCATCCTGACCTTGTTGCTTTTTC CCAGGACCAGTCGTGTGTGCAAACTCGTTGGAGGATGGTGGGCGACCTAC GTCTGCCTTGGGGTGAGGTTGGTCGACGAGTAGCCAGTGTCTAGCGCATT AGATAAGAGTTACAGAGCGAAAAACGCCAGTGGGGTGTGCGATAGGCGTT AGTGTGGGGTTGTGGTGGTGCGCTTGGAACCTCACACCACCCACCTCTCG CAGTCGTTTCCGGTCCATCGGTTTAATAACACCCATCGTGTCACGCGCTG GTTGTGTACCATCTTGGCGGTGTCCAGTCCAGCATGTAAACAGCTCGTGC CGTCTGATGTTTGACGAGCCTACTGCTTCAGTTTTCCATCTCAATCCTCC GTTCTCTGTTGTCTGTGCCGTCCGCCACCAATACGTCCATCAATGCCCTA CTCTTCGGAGCTCTCGCGCCACGCCTTGTTGTTTCGGCTTTAGCAATGGG ACACGCACACCCCACTACTCGGTGTTTCATGTTTCTTTTCTCCCGTTTCG TGTAACCTTTTCCTGCCTTTTCCGCCTCTGCTTCTCCTACTGGCCTGAAC GCCAACTAACGTATCTTTCATGCCTACGTTCTTTCTCAGGCCCGACGATC GACGTGGTGGGACGAACGACCTTCTCGTACGACGCGGGCCGCGGCCACCG CATATTTTCGTACGATGAAGTGTGGGAGGTTGAGCCCACGGAGGCGCTGC TGCAGCTTTTCCGGCCGGGGACGCGAAACGACGACGAACTTTTGCCACCA GAGTAGGCTGGTGCACTGCTGCCAGCAACTGGAGATGGACAGATGCCGTG CCGTCGGTGGAATTTTTTTGTTGGGCAGCGGCGTCCGTGCGGCTGCTTTA GCGTAGAACGGCGGAGGAAGATTGACTGCTACTGCTGTACCGTACCACGA TGGCAGGTTATTTTGCGGCGTTTGGGAAGCGTGCTTTAGGGCTTGAAGGC TGCCCGCGATTCTCGCGACTTGTTCGAGCGGTCTGCGTGTTAGTTCTCAC CCCGTTCGTTCGCTCGGTGAAATTGGTGTTGTCAGTCCAACTCCCAGCAG TTCTGACATGCGTTTTCTGCTTCAAGGATTCATTGCAGGGCAT
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Coding sequence (CDS) from alignment at C-linearis_contig9:325461..327903+

>mRNA_C-linearis_contig9.16470.1 ID=mRNA_C-linearis_contig9.16470.1|Name=mRNA_C-linearis_contig9.16470.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=1632bp|location=Sequence derived from alignment at C-linearis_contig9:325461..327903+ (Chordaria linearis ClinC8C monoicous)
ATGGCTGTGAACTCACCTTGGACGCTTGTGGGGTGGGTGCTGGGTGTTTT
GAATCTTTGCTCACTCGCCACGAGCTTCGCACAAAGCCATCACTGCGTCA
CGAAAGCGGCACCCTCGTCAGCGTTGTTGCCAGCACACCGCCGTCGAGAT
CAAGGCACAGTACTGCTGCGATTGGCTCCCCAAAAGGAGCAGCAGAGCGA
GGTCGACGTCGCTGCGAGCAGTGCCAGTGTCTCTGAGTTCGAGCAAACTA
GCGGCCCGGTGAAGGCGTTCGTTGGTGGGTTGACCGACTTGTTCGTCCTG
CTTTCTGGTGGTGAGAACGAAGAAGAGGAGAATCTTCCGGCGGCCGCCCC
AAAGATGGCTGTGAACTCACCTTGGACGCTTGTGGGGTGGGTGCTGGGTG
TTTTGAATCTTTGCTCACTCGCCACGAGCTTCGCACAAAGCCATCACTGC
GTCACGAAAGCGGCACCCTCGTCAGCGTTGTTGCCAGCACACCGCCGTCG
AGATCAAGGCACAGTACTGCTGCGATTGGCTCCCCAAAAGGAGCAGCAGA
GCGAGGTCGACGTCGCTGCGAGCAGTGCCAGTGTCTCTGAGTTCGAGCAA
ACTAGCGGCCCGGTGAAGGCGTTCGTTGGTGGGTTGACCGACTTGTTCGT
CCTGCTTTCTGGTGGTGAGAACGAAGAAGAGGAGAATCTTCCGGCGGCCG
CCCCAAAGGCCAGTCTGTCGGTGAAGCAGCTCGAAGCCGGAATCCGCCAG
GAGTACGTGAAAAACTATCTCTGGACAGGAGACATCAACGAAGACTTGTA
CGAGGCCAGTCTGTCGGTGAAGCAGCTCGAAGCCGGAATCCGCCAGGAGT
ACGTGAAAAACTATCTCTGGACAGGAGACATCAACGAAGACTTGTACGAG
GAGGATTGCAGCTTCACCGACCCCACGCTGTCGTTCTCCGGGCTGTCGAC
GTACAAACGCAACGTGGGCAGCCTGCAGGGCGTGCTGGATCGGCTCGTTT
ATAATAGCCGCTCGGTGCTGTTCTCCTGCGAGCTCCAGCAGGAGGATTGC
AGCTTCACCGACCCCACGCTGTCGTTCTCCGGGCTGTCGACGTACAAACG
CAACGTGGGCAGCCTGCAGGGCGTGCTGGATCGGCTCGTTTATAATAGCC
GCTCGGTGCTGTTCTCCTGCGAGCTCCAGCAGGACCAGTCGTGTGTGCAA
ACTCGTTGGAGGATGGTGGGCGACCTACGTCTGCCTTGGGGACCAGTCGT
GTGTGCAAACTCGTTGGAGGATGGTGGGCGACCTACGTCTGCCTTGGGGC
CCGACGATCGACGTGGTGGGACGAACGACCTTCTCGTACGACGCGGGCCG
CGGCCACCGCATATTTTCGTACGATGAAGTGTGGGAGGTTGAGCCCACGG
AGGCGCTGCTGCAGCTTTTCCGGCCGGGGACGCGAAACGACGACGAACTT
TTGCCACCAGAGTAGGCCCGACGATCGACGTGGTGGGACGAACGACCTTC
TCGTACGACGCGGGCCGCGGCCACCGCATATTTTCGTACGATGAAGTGTG
GGAGGTTGAGCCCACGGAGGCGCTGCTGCAGCTTTTCCGGCCGGGGACGC
GAAACGACGACGAACTTTTGCCACCAGAGTAG
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