prot_C-linearis_contig9.16470.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig9.16470.1
Unique Nameprot_C-linearis_contig9.16470.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length272
Homology
BLAST of mRNA_C-linearis_contig9.16470.1 vs. uniprot
Match: D7G2X2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2X2_ECTSI)

HSP 1 Score: 327 bits (839), Expect = 1.830e-110
Identity = 169/238 (71.01%), Postives = 193/238 (81.09%), Query Frame = 0
Query:   29 SHHCVTKAAPSSALL---PAHRRRDQGTVLLRLAPQKEQQSEVDVAASSASVSEFEQTSGPVKAFVGGLTDLFVLLSGGENEEEENLPAAAPKASLSVKQLEAGIRQEYVKNYLWTGDINEDLYEEDCSFTDPTLSFSGLSTYKRNVGSLQGVLDRLVYNSRSVLFSCELQQDQSCVQTRWRMVGDLRLPWGPTIDVVGRTTFSYDAGRGHRIFSYDEVWEVEPTEALLQLFRPGTRN 263
            +H C T +A  +  L   P+HR R +    LRLAP++EQ  E D  + S +VSEFEQTSG VKAFVGGLTDLFV  +GG+ + E      + KASLS  +LEAGIRQEY KNYLWTGDINEDLYEEDC+FTDPTLSFSGLSTYKRNVGSLQGVLD  V NSRSVL+SCEL+Q+ SCVQTRWRMVGDLRLPWGPTIDVVGRTTFSYD+ RG+RIFSYDEVWE+E  EAL+Q+FRPGTR+
Sbjct:    2 NHRCCTSSAYWTGGLSAAPSHRYRSRA---LRLAPRQEQ-GEGDTDSHSTAVSEFEQTSGSVKAFVGGLTDLFVRFAGGDEDSEALSADTSAKASLSEAELEAGIRQEYAKNYLWTGDINEDLYEEDCNFTDPTLSFSGLSTYKRNVGSLQGVLDLFVRNSRSVLYSCELRQEDSCVQTRWRMVGDLRLPWGPTIDVVGRTTFSYDSSRGNRIFSYDEVWEMEAAEALMQIFRPGTRD 235          
BLAST of mRNA_C-linearis_contig9.16470.1 vs. uniprot
Match: A0A835YYI6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYI6_9STRA)

HSP 1 Score: 182 bits (462), Expect = 1.210e-53
Identity = 92/191 (48.17%), Postives = 124/191 (64.92%), Query Frame = 0
Query:   73 SSASVSEFEQTSGPVKAFVGGLTDLFVLLSGGENEEEENLPAAAPKASLSVKQLEAGIRQEYV-KNYLWTGDINEDLYEEDCSFTDPTLSFSGLSTYKRNVGSLQGVLDRLVYNSRSVLFSCELQQDQSCVQTRWRMVGDLRLPWGPTIDVVGRTTFSYDAGRGHRIFSYDEVWEVEPTEALLQLFRPGTR 262
            SS +VS++  T G  K  V GLT+ F  +S  + EE            LS +QL  GI++++V K YLWTG I+++LY EDC FTDPTLSF GLST+K+NVGSL+ +++ LV      L SCEL + + CV+ RWRM G ++LPW P +DV+GRT F+YD   G+R+  Y E WE+   EAL+QL  PG R
Sbjct:   31 SSDTVSDYAGTGGIAKGIVSGLTNAFNAISPAKEEE-----VVVKAGKLSPRQLFTGIKEDFVDKRYLWTGLIDDNLYSEDCLFTDPTLSFRGLSTWKKNVGSLRPLVNALVPEFGVDLLSCELNEKEKCVRARWRMWGYIKLPWQPAVDVIGRTRFTYDPAEGNRVVDYFETWELPAGEALMQLVTPGKR 216          
BLAST of mRNA_C-linearis_contig9.16470.1 vs. uniprot
Match: A0A7S4KR88_GUITH (Hypothetical protein n=1 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4KR88_GUITH)

HSP 1 Score: 164 bits (414), Expect = 6.120e-46
Identity = 83/186 (44.62%), Postives = 117/186 (62.90%), Query Frame = 0
Query:   77 VSEFEQTSGPVKAFVGGLTDLF--VLLSGGENEEEENLPAAAPKASLSVKQLEAGIRQEYVKNYLWTGDINEDLYEEDCSFTDPTLSFSGLSTYKRNVGSLQGVLDRLVYNSRSVLFSCELQQDQSCVQTRWRMVGDLRLPWGPTIDVVGRTTFSYDAGRGHRIFSYDEVWEVEPTEALLQLFRPG 260
            +S +E++SG  K  +  LT+L   V+  GGE  EE N         LS++QL+ GI  +Y + YLWTG+I+  LY+E+C FTDPT+SF GL T+++N+ +L+  +D LV +    L+SCEL++    V  RWRM G L LPW P ID+VG T+F +D  RG+RI  Y E WE   +  LL L +PG
Sbjct:   74 ISTYEKSSGVTKFIISSLTELVNAVVGRGGEVPEESNT------RELSLEQLKLGIEDDYRRCYLWTGEIDPSLYDENCKFTDPTISFEGLRTFQKNLANLRPFIDALVKDYDVDLYSCELKEKNQQVVARWRMRGQLALPWRPLIDLVGSTSFKFDPERGNRIVEYRESWETPASTVLLGLLKPG 253          
BLAST of mRNA_C-linearis_contig9.16470.1 vs. uniprot
Match: A0A7S1DMA4_HEMAN (Hypothetical protein n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1DMA4_HEMAN)

HSP 1 Score: 158 bits (400), Expect = 9.680e-44
Identity = 97/251 (38.65%), Postives = 150/251 (59.76%), Query Frame = 0
Query:   15 GVLNLCSL-ATSFAQSHHCVTKAAPSSALLPAHRRRDQGTVLLRLAPQKEQQSEVDVAAS---SASVSEFEQTSGPVKAFVGGLTDLF-VLLSGGENEEEENLPAAAPKASLSVKQLEAGIRQEYVKNYLWTGDINEDLYEEDCSFTDPTLSFSGLSTYKRNVGSLQGVLDRLVYNSRSV-LFSCELQQDQSCVQTRWRMVGDLRLPWGPTIDVVGRTTFSYDAGRGHRIFSYDEVWEVEPTEALLQLFRP 259
            G+L L S   T+F  S+  V+      AL P   R+  G  LLR +  +E++  +++ A+   +   + + Q+S  VKA V GLT+L   ++  GE+  + + P    +  +S ++L  GI+ +Y + YLWTG+I+  LY+ DC FTDPTLSF GL T++ N+ +L+  +D LV +  SV ++ C+L   +  V+  WRMVG L++PW PTID+ G T F+Y   +G+RI  Y EVWE  P++ LLQL  P
Sbjct:   20 GMLVLSSRRGTAFMPSNIPVSNVGLKFALEPRSPRKA-GVELLRTSRGRERKRVLELRAAEEDTTKTTSYGQSSTGVKAIVSGLTNLVNAVMQRGEDPSKLDRPQ---RDDISEQELLEGIKGDYERRYLWTGEIDPYLYDYDCVFTDPTLSFKGLKTFQSNLANLRPFIDFLVQDDCSVEMYGCDLVLGEPQVKASWRMVGRLKVPWTPTIDLNGTTVFTYSPSKGNRIVDYQEVWETPPSKVLLQLLVP 266          
BLAST of mRNA_C-linearis_contig9.16470.1 vs. uniprot
Match: A0A061RRB7_9CHLO (Uncharacterized protein n=2 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061RRB7_9CHLO)

HSP 1 Score: 157 bits (396), Expect = 3.620e-43
Identity = 78/179 (43.58%), Postives = 112/179 (62.57%), Query Frame = 0
Query:   87 VKAFVGGLTDLFVLLSGGENEEEENLPAAAPKASLSVKQLEAGIRQEYVKN-YLWTGDINEDLYEEDCSFTDPTLSFSGLSTYKRNVGSLQGVLDRLVYNSRSVLFSCELQQDQSCVQTRWRMVGDLRLPWGPTIDVVGRTTFSYDAGRGHRIFSYDEVWEVEPTEALLQLFRPGTRND 264
            VK+ V GLT      SG   E  +       +A +S +QL  G+ +++ +N YLW+G I+ +LY  DC+FTDPTLSF GL T++RN+ +LQ  +DRLV N    L   +L +D + V+ RWRM GD++LPWGP I++ GRT F Y+  +G R+  Y E W++   EALLQL RP   ++
Sbjct:   87 VKSIVSGLTKAINWTSGSPPERVDYSTEEDTRAPVSPQQLLWGVEKDFTENGYLWSGAIDTNLYCRDCTFTDPTLSFKGLETFERNLRNLQPWIDRLVRNEVCELIDIQLLEDSNEVRARWRMKGDIQLPWGPQINLTGRTRFCYNPDKGGRVEEYFEEWDISGAEALLQLLRPARTSE 265          
BLAST of mRNA_C-linearis_contig9.16470.1 vs. uniprot
Match: A0A7S0Z2E3_9CRYP (Hypothetical protein n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0Z2E3_9CRYP)

HSP 1 Score: 155 bits (392), Expect = 1.390e-42
Identity = 87/217 (40.09%), Postives = 131/217 (60.37%), Query Frame = 0
Query:   45 AHRRRDQGTVLLRLAPQKEQQSEVDVAASSASVSEFEQTSGPVKAFVGGLTDLF-VLLSGGENEEEENLPAAAPKASLSVKQLEAGIRQEYVKNYLWTGDINEDLYEEDCSFTDPTLSFSGLSTYKRNVGSLQGVLDRLVYNSRSV-LFSCELQQDQSCVQTRWRMVGDLRLPWGPTIDVVGRTTFSYDAGRGHRIFSYDEVWEVEPTEALLQLFRP 259
            A RRR   +VL   A +K+          ++  + + Q+S  VKA V GLT+L   ++  GE+  + N P    +  ++ ++L  GI+ +Y + YLWTGDI+  LY+ +C FTDPTLSF+GL T++ N+ +L+  +D LV    +V ++ C+L   +  V+  WRMVG L++PW PTID+ G T F+Y   +G+RI  Y EVWE  P+E LLQL  P
Sbjct:   60 AARRRTSASVLGLRASEKD----------TSKTTSYGQSSTGVKAIVSGLTNLVNAVMQRGEDPSKLNRPE---RDGITEQELLEGIKGDYERRYLWTGDIDPYLYDYECVFTDPTLSFTGLETFQSNLANLRPFIDFLVQEDCAVEMYGCDLVPGEPRVKASWRMVGRLKVPWTPTIDLNGTTVFTYAPNKGNRIVDYQEVWETPPSEVLLQLLVP 263          
BLAST of mRNA_C-linearis_contig9.16470.1 vs. uniprot
Match: A0A6S9RDB2_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A6S9RDB2_CHRCT)

HSP 1 Score: 157 bits (398), Expect = 2.720e-41
Identity = 81/186 (43.55%), Postives = 116/186 (62.37%), Query Frame = 0
Query:   79 EFEQTSGPVKAFVGGLTDLFVLLSGGENEEEENLPAAAP-KASLSVKQLEAGIRQEYV-KNYLWTGDINEDLYEEDCSFTDPTLSFSGLSTYKRNVGSLQGVLDRLVYNSRSVLFSCELQQDQSCVQTRWRMVGDLRLPWGPTIDVVGRTTFSYDAGRGHRIFSYDEVWEVEPTEALLQLFRPGTR 262
            +F+ TS  V+  V  LT L   +SG   +E   L A +  +  L+  +L  G+R +YV + YLWTGDI+ +LY+ DC FTDPTLSF GLST++RN+ +L+ +LD LV +    L+S     D++ ++  WRM G++ LPW P ID+ G T F+YD  +G+RI  Y E W++    AL QL RPG R
Sbjct:  310 DFQGTSPFVQGVVSSLTALVNAVSGKTMDEPAALEADSELRPPLTPSELLEGVRDDYVARKYLWTGDIDPNLYDSDCVFTDPTLSFKGLSTFQRNIANLKPLLDALVRDPVVDLYSISSTVDETQIKATWRMKGEIALPWAPVIDLTGSTVFTYDPLKGNRITEYTESWDISAASALGQLLRPGAR 495          
BLAST of mRNA_C-linearis_contig9.16470.1 vs. uniprot
Match: R1FIQ6_EMIHU (Uncharacterized protein n=2 Tax=Emiliania huxleyi TaxID=2903 RepID=R1FIQ6_EMIHU)

HSP 1 Score: 142 bits (358), Expect = 4.260e-38
Identity = 83/196 (42.35%), Postives = 116/196 (59.18%), Query Frame = 0
Query:   77 VSEFEQTSGPVKAFVGGLTDLFVLLSGGENEEEENLPAAAPKASLSVKQLEAGIRQEYVKN-YLWTGDINEDLYEEDCSFTDPTLSFSGLSTYKRNVGSLQGVLDRLVY-NSRSV-LFSCELQQDQSCVQTRWRMVGDLRLPWGPTIDVVGRTTFSYDAGRGHRIFSYDEV----------WEVEPTEALLQLFRP 259
            ++E  +TS   +  V  LT L   +SGGE     + P    + SL    + AG+R ++ +N YLW+G I  +LY+EDC+FTDPTLSF+GLST++RN+ +L   ++R V   +RSV L S  L  D + V+  WRM+GDL LPW P +D+ GRT ++   G G RI SYDE           W + P+EAL  L RP
Sbjct:   16 LNEISETSRATRGLVSSLTALVNTISGGE---PPSAPRRREQESLDAGDVLAGLRTDFEENEYLWSGRITAELYDEDCTFTDPTLSFAGLSTFERNLANLDPWIERFVPPTARSVELKSLRLVDDGAAVEAEWRMLGDLALPWRPRLDLGGRTRYTL-GGEGGRISSYDEARARERWHREAWAITPSEALWMLVRP 207          
BLAST of mRNA_C-linearis_contig9.16470.1 vs. uniprot
Match: C1N9A8_MICPC (Predicted protein n=1 Tax=Micromonas pusilla (strain CCMP1545) TaxID=564608 RepID=C1N9A8_MICPC)

HSP 1 Score: 142 bits (359), Expect = 2.700e-37
Identity = 88/212 (41.51%), Postives = 117/212 (55.19%), Query Frame = 0
Query:   78 SEFEQTSGPVKAFVGGLTDLFVLL-------SGGENE------EEENLPAAAPKASLSVKQLEAGIRQEYVK-NYLWTGDINEDLYEEDCSFTDPTLSFSGLSTYKRNVGSLQGVLDRLVYNSRSVLFSCELQQDQS-------------CVQTRWRMVGDLRLPWGPTIDVVGRTTFSY-DAG--RGHRIFSYDEVWEVEPTEALLQLFRP 259
            S++E+TSG VKA V GLT +   +       S G N+      +E       P +      L   I +E+ +  YLWTGDIN ++Y+  C+FTDPTLSF+GL T++ N+ +LQ VL RLV NS   L+SCE+  D S              V+  WRM GDL LPW P ID+ G+TTF + DAG  RG  I SY E W +   +A+ QL  P
Sbjct:   85 SKYEETSGAVKALVSGLTAIVNAVGSVTSSSSSGSNDGAKLTRKERRDARPFPSSPRDATALRDDIAREFTEAKYLWTGDINPEMYDLFCTFTDPTLSFAGLQTFETNLKNLQPVLRRLVRNSNVELYSCEIVDDGSGGXXXXXXXXXXXSVRASWRMTGDLNLPWRPRIDLTGQTTFGFKDAGVERGCLIVSYLEEWGISALDAVAQLVAP 296          
BLAST of mRNA_C-linearis_contig9.16470.1 vs. uniprot
Match: C1E2X3_MICCC (Uncharacterized protein n=1 Tax=Micromonas commoda (strain RCC299 / NOUM17 / CCMP2709) TaxID=296587 RepID=C1E2X3_MICCC)

HSP 1 Score: 141 bits (355), Expect = 1.000e-36
Identity = 82/203 (40.39%), Postives = 113/203 (55.67%), Query Frame = 0
Query:   78 SEFEQTSGPVKAFVGGLTDLFVLLSGGENEEEEN-----------LPAAAPKASLSVKQLEAGIRQEYVK-NYLWTGDINEDLYEEDCSFTDPTLSFSGLSTYKRNVGSLQGVLDRLVYNSRSVLFSCELQQDQS------CVQTRWRMVGDLRLPWGPTIDVVGRTTFS---YDAGRGHRIFSYDEVWEVEPTEALLQLFRP 259
            S +++TSG VK  V GLT +      G  +   +                P    +   L A I +E+ +  YLWTGDIN ++Y+  C+FTDPTLSF+GL T++RN+ +LQ VL RLV +S   L+SCEL  D         V+ RWRM G+LR+PW P ID+ G+TTF+   Y   RG  I +Y E W +   EA++QL  P
Sbjct:   92 SNYKETSGAVKGLVSGLTAVVNAFGVGGGDVASSGSXXXXXXXXXXXXXXPSTPRNPTALAADIAREFTEAKYLWTGDINPEMYDLYCTFTDPTLSFAGLETFQRNLANLQPVLSRLVRDSDVELYSCELAGDGKGXXXXXAVRARWRMTGNLRVPWRPRIDLEGQTTFTFKDYGGDRGCLITAYQEEWGLSAGEAVMQLVTP 294          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig9.16470.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G2X2_ECTSI1.830e-11071.01Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835YYI6_9STRA1.210e-5348.17Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S4KR88_GUITH6.120e-4644.62Hypothetical protein n=1 Tax=Guillardia theta TaxI... [more]
A0A7S1DMA4_HEMAN9.680e-4438.65Hypothetical protein n=1 Tax=Hemiselmis andersenii... [more]
A0A061RRB7_9CHLO3.620e-4343.58Uncharacterized protein n=2 Tax=Tetraselmis sp. GS... [more]
A0A7S0Z2E3_9CRYP1.390e-4240.09Hypothetical protein n=1 Tax=Hemiselmis tepida Tax... [more]
A0A6S9RDB2_CHRCT2.720e-4143.55Hypothetical protein n=1 Tax=Chrysotila carterae T... [more]
R1FIQ6_EMIHU4.260e-3842.35Uncharacterized protein n=2 Tax=Emiliania huxleyi ... [more]
C1N9A8_MICPC2.700e-3741.51Predicted protein n=1 Tax=Micromonas pusilla (stra... [more]
C1E2X3_MICCC1.000e-3640.39Uncharacterized protein n=1 Tax=Micromonas commoda... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR018790Protein of unknown function DUF2358PFAMPF10184DUF2358coord: 130..231
e-value: 1.7E-12
score: 47.6
NoneNo IPR availablePANTHERPTHR34123FAMILY NOT NAMEDcoord: 48..263
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 9..22
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..8
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 23..27
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 28..271
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..27
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..23
score: 0.778
IPR032710NTF2-like domain superfamilySUPERFAMILY54427NTF2-likecoord: 145..237

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig9contigC-linearis_contig9:325503..327566 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig9.16470.1mRNA_C-linearis_contig9.16470.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig9 325461..327903 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig9.16470.1 ID=prot_C-linearis_contig9.16470.1|Name=mRNA_C-linearis_contig9.16470.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=272bp
MAVNSPWTLVGWVLGVLNLCSLATSFAQSHHCVTKAAPSSALLPAHRRRD
QGTVLLRLAPQKEQQSEVDVAASSASVSEFEQTSGPVKAFVGGLTDLFVL
LSGGENEEEENLPAAAPKASLSVKQLEAGIRQEYVKNYLWTGDINEDLYE
EDCSFTDPTLSFSGLSTYKRNVGSLQGVLDRLVYNSRSVLFSCELQQDQS
CVQTRWRMVGDLRLPWGPTIDVVGRTTFSYDAGRGHRIFSYDEVWEVEPT
EALLQLFRPGTRNDDELLPPE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR018790DUF2358
IPR032710NTF2-like_dom_sf