mRNA_C-linearis_contig84.16106.1 (mRNA) Chordaria linearis ClinC8C monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-linearis_contig84.16106.1
Unique NamemRNA_C-linearis_contig84.16106.1
TypemRNA
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Homology
BLAST of mRNA_C-linearis_contig84.16106.1 vs. uniprot
Match: A0A6H5JSI2_9PHAE (NB-ARC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSI2_9PHAE)

HSP 1 Score: 249 bits (636), Expect = 1.840e-64
Identity = 156/327 (47.71%), Postives = 193/327 (59.02%), Query Frame = 2
Query:  680 VADDVWEAAAVKMLRKTGMWVLLTTRDASIW*NPTKGC*WTNSL--KPEDVLRGAARLPRGERLCDDVLNVLEICRHVAMDIAFVGSRGSVRTPDNDVHKGSSAWREVMQDITIQINNVKAEPLAETAGDMDDHDRTRLAILRAGFKYLGAGDPLAQELYTALAVFPDGCAIGDSDAAVLLADKDPLTDHHNEVFGPIAILERWAVLRSDASGLYRMHDAHVGFARESLMDQGNNSQMVVV----HISLRRGGRYRRVRAAG-----------HFASVGGDGWWFSRPYDGQLVKM----DASEGSKI*AVKVVAELYEQEKKFVEL 1597
            VADDVWEA+ V+ LR+TGMWVLLTTR   +   P +       +  + EDVLRGAA LP GERLCD  + VLEIC  VAMD AFVGS  SVRT  N V K + AW   ++++T QI++V+ +      G+ +D    RLA+LRAGFKY+G  DPLAQELY  LAVFP+G   G+SDAAVLL +++          GPI+ILERW VLR+DAS  YR HDAH  FAR+ LMD+ +  +  V     HIS       R   A G               VGG GWW  RPYD QL++M     A+  +   AV VV  LY   +K  EL
Sbjct:  298 VADDVWEASVVQKLRETGMWVLLTTRFPEMG-EPEERVVMDTLIPAEAEDVLRGAAELPLGERLCDASMKVLEICGRVAMDTAFVGSWTSVRTT-NGVPKSNKAWERTVEELTAQIDHVRGQMKVGNTGEDNDRAINRLAVLRAGFKYIGREDPLAQELYVKLAVFPEGFLFGESDAAVLLENEEVAK-------GPISILERWGVLRTDASEKYRTHDAHADFARKKLMDRNDLREPAVERWTEHIS-------RLDFAVGVEIFVLLPMWRALEEVGGKGWWALRPYDDQLIQMVTSNPATSYATSGAVGVVMNLYRGARKLGEL 608          
BLAST of mRNA_C-linearis_contig84.16106.1 vs. uniprot
Match: A0A6H5KE50_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KE50_9PHAE)

HSP 1 Score: 238 bits (606), Expect = 3.150e-61
Identity = 163/322 (50.62%), Postives = 190/322 (59.01%), Query Frame = 2
Query:  680 VADDVWEAAAVKMLRKTGMWVLLTTRDASIW*NPTKGC*WTNSLKP---EDVLRGAARLPRGERLCDDVLNVLE-ICRHVAMDIAFVGSRGSVRTPDNDVHKGSSAWREVMQDITIQINNVKAEPLAETAGDMDDHDRTRLAILRAGFKYLGAGD-PLAQELYTALAVFPDGCAIGDSDAAVLLADK---DPLTDHHNEVFGPIAILERWAVLRSDASGLYRMHDAHVGFARESLMDQGNNSQMVV----VHISLRRGGRYRRVRAAGHFAS----VGGDGWWFSRPYDGQLVKMDASEGSKI*AVKVVAELYEQEKKFVEL 1597
            VADDVWE   V  L++TGMWVLLTTR   I   P +G    + L P   EDVLRGAA LPRG+RLCD  + VL+ IC  VAMDIAFVGS   VR  D+     S AW E +  I   I +V+     E A  M+D    RL ILRAGF YLG  +  LAQ+LY A+AVFPDG A G SDAAVLL D    DP   H       I ILERWAVL  +ASG YRMHD H+ FAR+ + DQG+  + VV      IS       R V A          VGGDGW+  RPYD +LV M  S+ SK  A+ VVAELYEQE+K  E+
Sbjct:  402 VADDVWEPPVVAKLKETGMWVLLTTRFPEIV-EPNEGVD-VDQLTPAEAEDVLRGAAELPRGQRLCDPAMQVLDDICGFVAMDIAFVGSWSMVRHTDD-----SGAWAEAVSKINDTIVDVR-----EDADGMNDSQVKRLGILRAGFDYLGEEEGTLAQKLYVAIAVFPDGYAFGVSDAAVLLNDTHPPDPAPHHMKVASRAIEILERWAVLTMNASGKYRMHDTHMDFARDKIRDQGDVRKPVVRRWTSRISRLDFAVGRDVYALSDIWRAVEWVGGDGWFDLRPYDKELVSM-GSDCSKSHALDVVAELYEQEQKLAEM 710          
BLAST of mRNA_C-linearis_contig84.16106.1 vs. uniprot
Match: D7G330_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G330_ECTSI)

HSP 1 Score: 188 bits (478), Expect = 2.650e-48
Identity = 108/207 (52.17%), Postives = 133/207 (64.25%), Query Frame = 1
Query:  217 ARLDRQPNLASVPKCVPMGQSWHTSRDRVVYKVCHILGEDEEPSMAALVGRSGAGKITAATAMVGERS-PVRPCAGETENDARTRLDHVRALFPDGILWLRVGKGEGAPDRLPALMHRLAKALHEDVMEKYIDAPAAAEDGEIHIIRNIILQGSLRG**CVGGSSS-------QNAEEDGHVGTPDYSRRLNMVKPNERVLMDELTK 813
            ARL  +P LA VP  VPMGQSWHT RD VV +V  ILG D  P++AAL GRSGAGK TAA AMVGER  P+ P A E E  A TRLD +RA F DG++WLRVGKG G  DRLP LM +LAKALHE+V++ Y+D P   EDGE ++ + I+ Q SL+   C   +         +   E G +     +R  +MV+PNERV +D L K
Sbjct:  156 ARLQPRPKLAPVPPGVPMGQSWHTMRDGVVDRVYDILGGDGGPAVAALGGRSGAGKTTAAAAMVGERQGPIHPLARENEEQAGTRLDRLRARFSDGVVWLRVGKGAGVADRLPLLMRKLAKALHEEVLKSYVDGPGIGEDGESYV-KKIVEQESLK---CRVVADDVWEPPVVEKLRETG-MWILLTARNPSMVEPNERVFVDRLEK 357          
BLAST of mRNA_C-linearis_contig84.16106.1 vs. uniprot
Match: A0A6H5K0A6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0A6_9PHAE)

HSP 1 Score: 171 bits (432), Expect = 4.510e-41
Identity = 110/250 (44.00%), Postives = 139/250 (55.60%), Query Frame = 1
Query:   85 SWKLRNRLHITSRRNWKLQPPTAELSEDVFTRQQQEVYLDA*PWARLDRQPNLASVPKCVPMGQSWHTSRDRVVYKVCHILGEDEEPSMAALVGRSGAGKITAATA-MVGERS-PVRPCAGETENDARTRLDHVRALFPDGILWLRVGKGEGAPDRLPALMHRLAKALHEDVMEKYIDAPAAA------ED-GEIHIIRNIILQGSLRG**CVGGSSSQNAEEDGHVGTPDYSRRLNMVKPNERVLMDEL 807
            SW      + TSR++         +   VF RQ   V + A    RL  +P L SVP  VPMGQSWHT RD VV +V  ILG D  P+ AAL G+ GAGK TAA A MVGER  P+ P A E E  ARTRLD +RA F DG++WLRVGKG GA DRLP LM +LAKALHE+V++ ++DAP  A      ED  E+ ++  +   G                     +     +R  +MV+PNE+V +D L
Sbjct:  237 SWTSSKTSYATSRQD-------KTVDNHVFLRQTPPVLVQA----RLPPRPKLVSVPPGVPMGQSWHTMRDGVVDRVYAILGGDGGPAAAALGGQRGAGKTTAAAAAMVGERQGPIHPLAHENEEQARTRLDRLRARFSDGVMWLRVGKGAGASDRLPLLMRKLAKALHEEVLKSHVDAPGVAACLVVAEDVWELPVVEKLRETG---------------------MWILLTTRNPSMVEPNEKVFVDRL 454          
BLAST of mRNA_C-linearis_contig84.16106.1 vs. uniprot
Match: A0A6H5KUE6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUE6_9PHAE)

HSP 1 Score: 146 bits (369), Expect = 4.270e-35
Identity = 90/204 (44.12%), Postives = 119/204 (58.33%), Query Frame = 1
Query:  217 ARLDRQPNLASVPKCVPMGQSWHTSRDRVVYKVCHILGEDEEPSMAALVGRSGAGKITAATAMVGERSPVRPCAGETENDARTRLDHVRALFPDGILWLRVGKGEGAPDRLPALMHRLAKALHEDVMEKYIDAPAAAEDGEIHIIRNIILQGSLRG**CVGGSSSQNAEEDGHVGTPDY-----SRRLNMVKPNERVLMDELTK 813
            ARL  +P LA VP+ +P+ QSW   R  V  +VC ILG    P++AAL GRSG GK T+A A++ ER P+ P AGETE+ ARTRLD                +GEG  +R P+LMH LAKA +EDVMEK +D PAA EDGE ++    + + SLR    V     +  E    +          +R  +MV+PNERVL+D+LT+
Sbjct:   70 ARLQPRPQLAPVPEGIPVRQSWPAVRHGVEDRVCRILGGGRRPAVAALTGRSGTGKTTSAAAVLRERGPIHPRAGETEDMARTRLD----------------RGEGDENRSPSLMHTLAKARYEDVMEKRVDTPAAGEDGESYV-NKFVSRESLRY--LVVADDVREVEVVEKLRKTGMWVLLTTRIASMVEPNERVLVDQLTQ 254          
BLAST of mRNA_C-linearis_contig84.16106.1 vs. uniprot
Match: A0A6H5KU40_9PHAE (NB-ARC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KU40_9PHAE)

HSP 1 Score: 122 bits (307), Expect = 1.070e-24
Identity = 83/233 (35.62%), Postives = 126/233 (54.08%), Query Frame = 2
Query:  680 VADDVWEAAAVKMLRKTGMWVLLTTRDASIW*NPTKGC*WTNSLKPED---VLRGAARLPRGERLCDDVLNVLEICRHVAMDIAFVGSRGSVRTPDNDVHKGSSAWREVMQDITIQINNVKAEPLAETAGDMDDH--DRTRLAILRAGFKYLGAGDPLAQELYTALAVFPDGCAIGDSDAAVLLADKDPLTDHHNEVFGPIAILERWAVLRSDAS-GLYRMHDAHVGFARESL 1360
            VADDVWE   + MLR++GM  L+T+RD  +           + +  E+   +L+ AA+L  GE   ++   +L++C +VAM++ FVG    +R+   D  +   AW E+  +I  +++        +  GD DD    + R  I R G+K  G+GD   + LY +L + P+G A   SDA++LL       D  N     +A LERWAV+R ++S G YRMHDAH  FAR+ L
Sbjct:  316 VADDVWEPEVLDMLRQSGMKALITSRDYELTEASGGKAVVMDHVTEEEGMLILQKAAKLRSGESPPNEARKILDLCNYVAMELNFVGRLSMLRS-QVDGTQWLRAWNEIRSEIGAEVS--------DPGGDFDDWAASKRRDVIFRVGYKDFGSGDVRNKILYLSLGILPNGYAFRVSDASLLLFGACQGRDMEN-AGDVVADLERWAVVRLESSDGTYRMHDAHSEFARKIL 538          
BLAST of mRNA_C-linearis_contig84.16106.1 vs. uniprot
Match: A0A6H5L204_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L204_9PHAE)

HSP 1 Score: 110 bits (276), Expect = 8.420e-22
Identity = 65/119 (54.62%), Postives = 70/119 (58.82%), Query Frame = 2
Query:  821 DVLRGAARLPRGERLCDDVLNVLEICRHVAMDIAFVGSRGSVRTPDNDVHKGSSAWREVMQDITIQINNVKAEPLAETAGDMDDHDRTRLAILRAGFKYLGAGDPLAQELYTALAVFPD 1177
            +VLRGAA LPR   LCDD L VLE    VAMDIAFVGS  SVRTPD+   K S AW   +++I  Q   V             D D  RLAILRAGF YL    PLAQELY  LA FPD
Sbjct:   20 NVLRGAANLPRDGDLCDDALKVLETYGGVAMDIAFVGSWSSVRTPDSCAPKSSWAWTRAVEEIEAQGGGVGV-----------DRDANRLAILRAGFMYLARDYPLAQELYDKLAAFPD 127          
BLAST of mRNA_C-linearis_contig84.16106.1 vs. uniprot
Match: D8LFN6_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFN6_ECTSI)

HSP 1 Score: 112 bits (279), Expect = 2.200e-21
Identity = 61/132 (46.21%), Postives = 82/132 (62.12%), Query Frame = 1
Query:  241 LASVPKCVPMGQSWHTSRDRVVYKVCHILGEDEEPSMAALVGRSGAGKITAATAMVGERSPVRPCAGETENDARTRLDHVRALFPDGILWLRVGKGEGAPDRLPALMHRLAKALHEDVMEKYIDAPAAAEDG 636
            +A+VP   P+  SWH +RDRVV  V   L   + P +  LVGRSG+GK T A ++VGE S  R    ET +    RL+ VR  F DG++WLRVG+G G+ +R+PALM +LAK + ED+   Y  AP A+  G
Sbjct:  219 VAAVPNGKPVEHSWHVARDRVVDAVYEHLSCGQTPQVVGLVGRSGSGKTTCAASIVGE-STGRRHQNETGDQMLRRLNRVREHFRDGVVWLRVGRGGGSAERVPALMSQLAKTVFEDLKHSYGFAPGASPTG 349          
BLAST of mRNA_C-linearis_contig84.16106.1 vs. uniprot
Match: A0A6H5KRK8_9PHAE (NB-ARC domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KRK8_9PHAE)

HSP 1 Score: 78.6 bits (192), Expect = 5.200e-11
Identity = 52/148 (35.14%), Postives = 72/148 (48.65%), Query Frame = 1
Query:  220 RLDRQP-NLASVPKCVPMGQSWHTSRDRVVYKVCHILGEDEEPSMAALVGRSGAGKITAATAMVGERSPVRPCAGETENDARTRLDHVRALFPDGILWLRVGKGEGAPDRLPALMHRLAKALHEDVMEKYIDAPAAAEDGEIHIIRNI 660
            +L + P  +A+VPK  P  +SWH  R  V   V   L  D  P +  LVG SGAGK TAA+A+V                       VR  F DGI+WL V   EG  D LP LM +LA+ + ED+       P+ ++DG  ++ + +
Sbjct:  192 QLPKPPAKVANVPKGTPTHKSWHVERRNVTETVFQALDADGGPHLVGLVGDSGAGKTTAASAIVSSIV-------------------VRETFSDGIVWLPVN--EGVHDNLPCLMLQLAQMVFEDIGGSVGRRPSGSDDGLAYVKQQV 318          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig84.16106.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 9
Match NameE-valueIdentityDescription
A0A6H5JSI2_9PHAE1.840e-6447.71NB-ARC domain-containing protein n=1 Tax=Ectocarpu... [more]
A0A6H5KE50_9PHAE3.150e-6150.62Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G330_ECTSI2.650e-4852.17Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K0A6_9PHAE4.510e-4144.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KUE6_9PHAE4.270e-3544.12Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KU40_9PHAE1.070e-2435.62NB-ARC domain-containing protein n=1 Tax=Ectocarpu... [more]
A0A6H5L204_9PHAE8.420e-2254.62Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LFN6_ECTSI2.200e-2146.21NB-ARC and TPR repeat-containing protein n=1 Tax=E... [more]
A0A6H5KRK8_9PHAE5.200e-1135.14NB-ARC domain-containing protein n=2 Tax=Ectocarpu... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig84contigC-linearis_contig84:408353..411632 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score126.3
Seed ortholog evalue1.7e-26
Seed eggNOG ortholog2880.D7FZX2
KEGG koko:K10407
KEGG Pathwayko05132,map05132
Hectar predicted targeting categoryother localisation
EggNOG free text desc.determination of stomach left/right asymmetry
EggNOG OGsCOG0457@1,KOG1840@2759
COG Functional cat.C
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko03019,ko04812
Exons3
Model size2978
Cds size633
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig84.16106.1prot_C-linearis_contig84.16106.1Chordaria linearis ClinC8C monoicouspolypeptideC-linearis_contig84 409800..410432 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930636.4486072-UTR-C-linearis_contig84:408352..4096141622930636.4486072-UTR-C-linearis_contig84:408352..409614Chordaria linearis ClinC8C monoicousUTRC-linearis_contig84 408353..409614 -
1690881171.7496362-UTR-C-linearis_contig84:408352..4096141690881171.7496362-UTR-C-linearis_contig84:408352..409614Chordaria linearis ClinC8C monoicousUTRC-linearis_contig84 408353..409614 -
1622930636.4635296-UTR-C-linearis_contig84:409626..4097991622930636.4635296-UTR-C-linearis_contig84:409626..409799Chordaria linearis ClinC8C monoicousUTRC-linearis_contig84 409627..409799 -
1690881171.7669334-UTR-C-linearis_contig84:409626..4097991690881171.7669334-UTR-C-linearis_contig84:409626..409799Chordaria linearis ClinC8C monoicousUTRC-linearis_contig84 409627..409799 -
1622930636.490047-UTR-C-linearis_contig84:410432..4111261622930636.490047-UTR-C-linearis_contig84:410432..411126Chordaria linearis ClinC8C monoicousUTRC-linearis_contig84 410433..411126 -
1690881171.7927928-UTR-C-linearis_contig84:410432..4111261690881171.7927928-UTR-C-linearis_contig84:410432..411126Chordaria linearis ClinC8C monoicousUTRC-linearis_contig84 410433..411126 -
1622930636.5106344-UTR-C-linearis_contig84:411416..4116321622930636.5106344-UTR-C-linearis_contig84:411416..411632Chordaria linearis ClinC8C monoicousUTRC-linearis_contig84 411417..411632 -
1690881171.801111-UTR-C-linearis_contig84:411416..4116321690881171.801111-UTR-C-linearis_contig84:411416..411632Chordaria linearis ClinC8C monoicousUTRC-linearis_contig84 411417..411632 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930636.4761813-CDS-C-linearis_contig84:409799..4104321622930636.4761813-CDS-C-linearis_contig84:409799..410432Chordaria linearis ClinC8C monoicousCDSC-linearis_contig84 409800..410432 -
1690881171.7777927-CDS-C-linearis_contig84:409799..4104321690881171.7777927-CDS-C-linearis_contig84:409799..410432Chordaria linearis ClinC8C monoicousCDSC-linearis_contig84 409800..410432 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-linearis_contig84.16106.1

>prot_C-linearis_contig84.16106.1 ID=prot_C-linearis_contig84.16106.1|Name=mRNA_C-linearis_contig84.16106.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=211bp
MDIAFVGSRGSVRTPDNDVHKGSSAWREVMQDITIQINNVKAEPLAETAG
DMDDHDRTRLAILRAGFKYLGAGDPLAQELYTALAVFPDGCAIGDSDAAV
LLADKDPLTDHHNEVFGPIAILERWAVLRSDASGLYRMHDAHVGFARESL
MDQGNNSQMVVVHISLRRGGRYRRVRAAGHFASVGGDGWWFSRPYDGQLV
KMDASEGSKI*
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mRNA from alignment at C-linearis_contig84:408353..411632-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-linearis_contig84.16106.1 ID=mRNA_C-linearis_contig84.16106.1|Name=mRNA_C-linearis_contig84.16106.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=3280bp|location=Sequence derived from alignment at C-linearis_contig84:408353..411632- (Chordaria linearis ClinC8C monoicous)
GCTGGAAGAGCGCTGGGAGAGCGGTCGCATTCACCCACAAACGAAGTCTC AAGGCACCTGCATCCAGTAAAGTGACCAGGTTATTCCTGGAAGCTGAGAA ACCGGCTCCATATCACTTCGCGGAGGAATTGGAAACTTCAACCGCCAACT GCTGAGCTTTCAGAAGATGTGTTCACCCGACAGCAACAAGAGGTTTACCT TGATGCCTGACCCTGGGTAGGTAAAACTAGCAAAGGGTGTTTCAGATGTC CGCACGAGTTTTCGAACAACGTAAACCATTTTATATTTTCGTTTTGTTTT GTTTTATTTTTCCAACTGAATAGCCTCTCTGTACGGTCTCTCGTTTTCTA GTTTTTACTCATGGATCAATCGTCTGAGTTTGGCGAGAGAGGCATGCTTC GATCTCTGGTATGTCAACACTCTCCTACAACTGTTCCTTGCAAATGAGCC TTGAATATCACACCTGCTGGGCTGTATCTCATACCTATCTTCACCGGTCT ACGCAGGCTCGTCTGGACCGACAACCTAACCTCGCATCGGTGCCGAAATG CGTTCCGATGGGACAGTCGTGGCACACCTCCCGTGATAGAGTGGTGTATA AAGTATGCCACATCCTGGGTGAGGATGAAGAGCCAAGCATGGCAGCCCTC GTGGGTCGAAGCGGGGCGGGCAAAATCACTGCCGCCACCGCCATGGTGGG TGAGCGTAGTCCCGTCCGTCCTTGCGCTGGTGAGACCGAAAACGACGCCC GCACTCGCTTGGACCACGTGAGGGCGCTTTTCCCCGACGGCATTCTGTGG CTGCGGGTCGGGAAAGGGGAGGGTGCTCCAGATCGGCTACCAGCTCTGAT GCATAGGCTAGCCAAGGCACTCCACGAAGATGTGATGGAAAAGTACATCG ACGCCCCGGCGGCGGCCGAGGACGGTGAGATCCACATAATAAGGAATATC ATATTGCAGGGGTCCCTACGTGGCTGATGATGTGTGGGAGGCAGCAGCAG TCAAAATGCTGAGGAAGACGGGCATGTGGGTACTCCTGACTACTCGAGAC GCCTCAATATGGTGAAACCCAACGAAAGGGTGTTGATGGACGAACTCACT AAAGCCGGAGGACGTACTGCGCGGTGCAGCTAGGCTACCGCGCGGTGAAC GCTTGTGTGACGACGTGCTGAACGTGTTGGAAATCTGCAGGCACGTGGCG ATGGACATCGCGTTCGTGGGGAGCCGGGGTTCTGTGCGTACCCCCGACAA TGACGTGCACAAGGGCAGCAGCGCGTGGAGAGAAGTCATGCAAGACATTA CGATCCAGATCAACAACGTGAAGGCCGAGCCGCTAGCCGAAACCGCCGGC GATATGGACGATCACGATAGAACCAGGCTTGCCATTCTGCGGGCCGGCTT CAAGTACCTCGGGGCAGGAGACCCTCTGGCCCAGGAGCTGTACACAGCAC TCGCGGTATTTCCCGACGGCTGCGCCATCGGTGACTCGGACGCAGCGGTG CTTTTGGCCGACAAAGATCCGCTCACTGATCACCACAATGAGGTTTTCGG GCCGATAGCAATCTTGGAGCGGTGGGCTGTTCTGAGATCGGATGCGTCCG GCCTGTACCGCATGCACGATGCCCATGTTGGCTTCGCGAGGGAAAGTCTC ATGGACCAAGGAAACAATTCGCAGATGGTCGTCGTACATATCTCGCTTAG ACGTGGCGGTCGGTATCGACGTGTACGCGCTGCTGGACATTTTGCGAGCG TTGGAGGTGACGGCTGGTGGTTCTCTCGGCCGTACGACGGCCAGTTGGTG AAAATGGATGCCTCTGAAGGCTCAAAGATATAGGCCGTGAAAGTTGTCGC TGAGCTGTACGAGCAAGAAAAGAAGTTCGTCGAACTGCTGTAGAAGCGCT CATTCAGAGAGTTCTAAAGAGTTGCGAAGACCACGGAGATGCCAATCCTG AGGTGACGATGGCGGCCCTGTTGTATATCGGGCGGAGTCTCGTCGTGAAA GGACGCGTTAGGGAGCAGGGAGAGGTACGACACCGGCTAGGTAAAATGGT TGGTACCAGCGTGGAGTTTCTCCTACCTAGTTGCAGCCACAGGACCCTGG TCATACATGTGTACGGAGTCTGTGCAGTTGCAGCAGTGGGCCAGAACGAT GCCGGGGAGTGGTTTCGAAAAGCGTTCAAGGTTCACGAGGACGGTGGTCT TGAGGCAAGTTTGTAATCGGTGTTCACGCTGGACGAACTGGGAAAGTAAG TGTGTGTGGCAGGCAGAGAGGCCAGAGCAGGCCGAGGAGCTCTTTCAACG AGCACTGGGCTTCGCGGAGGCCAAGCTGGGGCCCGATAATCTGCAGGTTG CCTGGACACTATACGAGATGAGTCGCTGTGTGAGAGAGGATGGGCGGCCT GGTGAGGCCGAAGTGTTCTTGACGCGAGCTTTCAAGATCGAAGAGGACAA GTTGCCGGCCGACGATCTGTAAATTTCTTTGACCCTCGTAGAGTTGGGTC GGTGTGTGCGGGAGGCGAGACGACCAGAGGAAGCCGAAGGGTTCTTGAAG CGAGCTCTAGACATGGTGTCGGCAAAGTTGGGGGCCGGCGACTTGCAGGC CGCGTGGGCGCGGGAGGTGGAGCAACCAGGGGAGGCGGAAGAATTACTAG AGCGGGCAGGACAAGAAAAAGAGGCGCAGCTTGGGGCGGGCCACTGCCGG ACGCTGCAGAAGCTGGGAGTATGCTGAGGAGACAGAGCAATCGGAGGAGA CGGAAAATAAGCAATTGCTTTGAGAAACTAAGTGATGCGTAGGAGCAGAA CGCATGGCTGTCGTGGTATTTCGTTTGCCGTTTGCTGCACAAACATTTAA ACTTGCAAGTATCATACTTCGACAATTGTATGTGGTTTGCTGGCGTTGCT AACTTAGTGACGGTATGTACTAGCGCTTGTGTGGATTACTTTGCGTGCAT CTGTACATTTTCCATTGAAGTCGGCTCTGTGTTTTTTGGCGGAGTGCCTT GGTATTTTATTCGTTGACGTGAAAAAGGTGTAGTGCGTGAAGTGCAGTGT GTTGCAAAAGCAATGGCCCTAATCGGTTGAAAAGATCCACCCACAGGGAA CGATCAAGAGGAACTTGTGTTTGCCCGTTGGAATATAAAACCGTGGATTT TTTTCCCCCAACGTTTAGGACACAGAGAAGGGCGAAGGTTGAGAAATCGT GCCAGACCGAGAAAATTGCCACGAGAGCGAGAGGCAGTCATTTGCTATTG AACAGCGGAAGGCCGGCATCGATTCCTGAA
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Coding sequence (CDS) from alignment at C-linearis_contig84:408353..411632-

>mRNA_C-linearis_contig84.16106.1 ID=mRNA_C-linearis_contig84.16106.1|Name=mRNA_C-linearis_contig84.16106.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=1266bp|location=Sequence derived from alignment at C-linearis_contig84:408353..411632- (Chordaria linearis ClinC8C monoicous)
ATGGACATCGCGTTCGTGGGGAGCCGGGGTTCTGTGCGTACCCCCGACAA
TGACGTGCACAAGGGCAGCAGCGCGTGGAGAGAAGTCATGCAAGACATTA
CGATCCAGATCAACAACGTGAAGGCCGAGCCGCTAGCCGAAACCGCCGGC
GATATGGACGATCACGATAGAACCAGGCTTGCCATTCTGCGGGCCGGCTT
CAAGTACCTCGGGGCAGGAGACCCTCTGGCCCAGGAGCTGTACACAGCAC
TCGCGGTATTTCCCGACGGCTGCGCCATCGGTGACTCGGACGCAGCGGTG
CTTTTGGCCGACAAAGATCCGCTCACTGATCACCACAATGAGGTTTTCGG
GCCGATAGCAATCTTGGAGCGGTGGGCTGTTCTGAGATCGGATGCGTCCG
GCCTGTACCGCATGCACGATGCCCATGTTGGCTTCGCGAGGGAAAGTCTC
ATGGACCAAGGAAACAATTCGCAGATGGTCGTCGTACATATCTCGCTTAG
ACGTGGCGGTCGGTATCGACGTGTACGCGCTGCTGGACATTTTGCGAGCG
TTGGAGGTGACGGCTGGTGGTTCTCTCGGCCGTACGACGGCCAGTTGGTG
AAAATGGATGCCTCTGAAGGCTCAAAGATATAGATGGACATCGCGTTCGT
GGGGAGCCGGGGTTCTGTGCGTACCCCCGACAATGACGTGCACAAGGGCA
GCAGCGCGTGGAGAGAAGTCATGCAAGACATTACGATCCAGATCAACAAC
GTGAAGGCCGAGCCGCTAGCCGAAACCGCCGGCGATATGGACGATCACGA
TAGAACCAGGCTTGCCATTCTGCGGGCCGGCTTCAAGTACCTCGGGGCAG
GAGACCCTCTGGCCCAGGAGCTGTACACAGCACTCGCGGTATTTCCCGAC
GGCTGCGCCATCGGTGACTCGGACGCAGCGGTGCTTTTGGCCGACAAAGA
TCCGCTCACTGATCACCACAATGAGGTTTTCGGGCCGATAGCAATCTTGG
AGCGGTGGGCTGTTCTGAGATCGGATGCGTCCGGCCTGTACCGCATGCAC
GATGCCCATGTTGGCTTCGCGAGGGAAAGTCTCATGGACCAAGGAAACAA
TTCGCAGATGGTCGTCGTACATATCTCGCTTAGACGTGGCGGTCGGTATC
GACGTGTACGCGCTGCTGGACATTTTGCGAGCGTTGGAGGTGACGGCTGG
TGGTTCTCTCGGCCGTACGACGGCCAGTTGGTGAAAATGGATGCCTCTGA
AGGCTCAAAGATATAG
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