prot_C-linearis_contig84.16106.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig84.16106.1
Unique Nameprot_C-linearis_contig84.16106.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length211
Homology
BLAST of mRNA_C-linearis_contig84.16106.1 vs. uniprot
Match: A0A6H5JSI2_9PHAE (NB-ARC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSI2_9PHAE)

HSP 1 Score: 171 bits (432), Expect = 2.230e-45
Identity = 102/220 (46.36%), Postives = 128/220 (58.18%), Query Frame = 0
Query:    1 MDIAFVGSRGSVRTPDNDVHKGSSAWREVMQDITIQINNVKAEPLAETAGDMDDHDRTRLAILRAGFKYLGAGDPLAQELYTALAVFPDGCAIGDSDAAVLLADKDPLTDHHNEVFGPIAILERWAVLRSDASGLYRMHDAHVGFARESLMDQGNNSQMVVV----HISLRRGGRYRRVRAAG-----------HFASVGGDGWWFSRPYDGQLVKMDAS 205
            MD AFVGS  SVRT  N V K + AW   ++++T QI++V+ +      G+ +D    RLA+LRAGFKY+G  DPLAQELY  LAVFP+G   G+SDAAVLL +++          GPI+ILERW VLR+DAS  YR HDAH  FAR+ LMD+ +  +  V     HIS       R   A G               VGG GWW  RPYD QL++M  S
Sbjct:  376 MDTAFVGSWTSVRTT-NGVPKSNKAWERTVEELTAQIDHVRGQMKVGNTGEDNDRAINRLAVLRAGFKYIGREDPLAQELYVKLAVFPEGFLFGESDAAVLLENEEVAK-------GPISILERWGVLRTDASEKYRTHDAHADFARKKLMDRNDLREPAVERWTEHIS-------RLDFAVGVEIFVLLPMWRALEEVGGKGWWALRPYDDQLIQMVTS 580          
BLAST of mRNA_C-linearis_contig84.16106.1 vs. uniprot
Match: A0A6H5KE50_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KE50_9PHAE)

HSP 1 Score: 147 bits (371), Expect = 3.220e-37
Identity = 102/214 (47.66%), Postives = 118/214 (55.14%), Query Frame = 0
Query:    1 MDIAFVGSRGSVRTPDNDVHKGSSAWREVMQDITIQINNVKAEPLAETAGDMDDHDRTRLAILRAGFKYLGAGD-PLAQELYTALAVFPDGCAIGDSDAAVLLADK---DPLTDHHNEVFGPIAILERWAVLRSDASGLYRMHDAHVGFARESLMDQGNNSQMVV----VHISLRRGGRYRRVRAAGHFAS----VGGDGWWFSRPYDGQLVKM 202
            MDIAFVGS   VR  D+     S AW E +  I   I +V+     E A  M+D    RL ILRAGF YLG  +  LAQ+LY A+AVFPDG A G SDAAVLL D    DP   H       I ILERWAVL  +ASG YRMHD H+ FAR+ + DQG+  + VV      IS       R V A          VGGDGW+  RPYD +LV M
Sbjct:  481 MDIAFVGSWSMVRHTDD-----SGAWAEAVSKINDTIVDVR-----EDADGMNDSQVKRLGILRAGFDYLGEEEGTLAQKLYVAIAVFPDGYAFGVSDAAVLLNDTHPPDPAPHHMKVASRAIEILERWAVLTMNASGKYRMHDTHMDFARDKIRDQGDVRKPVVRRWTSRISRLDFAVGRDVYALSDIWRAVEWVGGDGWFDLRPYDKELVSM 684          
BLAST of mRNA_C-linearis_contig84.16106.1 vs. uniprot
Match: A0A6H5L204_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L204_9PHAE)

HSP 1 Score: 79.7 bits (195), Expect = 7.950e-14
Identity = 46/89 (51.69%), Postives = 50/89 (56.18%), Query Frame = 0
Query:    1 MDIAFVGSRGSVRTPDNDVHKGSSAWREVMQDITIQINNVKAEPLAETAGDMDDHDRTRLAILRAGFKYLGAGDPLAQELYTALAVFPD 89
            MDIAFVGS  SVRTPD+   K S AW   +++I  Q   V             D D  RLAILRAGF YL    PLAQELY  LA FPD
Sbjct:   50 MDIAFVGSWSSVRTPDSCAPKSSWAWTRAVEEIEAQGGGVGV-----------DRDANRLAILRAGFMYLARDYPLAQELYDKLAAFPD 127          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig84.16106.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5JSI2_9PHAE2.230e-4546.36NB-ARC domain-containing protein n=1 Tax=Ectocarpu... [more]
A0A6H5KE50_9PHAE3.220e-3747.66Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L204_9PHAE7.950e-1451.69Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig84contigC-linearis_contig84:409800..410432 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig84.16106.1mRNA_C-linearis_contig84.16106.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig84 408353..411632 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig84.16106.1 ID=prot_C-linearis_contig84.16106.1|Name=mRNA_C-linearis_contig84.16106.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=211bp
MDIAFVGSRGSVRTPDNDVHKGSSAWREVMQDITIQINNVKAEPLAETAG
DMDDHDRTRLAILRAGFKYLGAGDPLAQELYTALAVFPDGCAIGDSDAAV
LLADKDPLTDHHNEVFGPIAILERWAVLRSDASGLYRMHDAHVGFARESL
MDQGNNSQMVVVHISLRRGGRYRRVRAAGHFASVGGDGWWFSRPYDGQLV
KMDASEGSKI*
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