mRNA_C-linearis_contig8.15716.1 (mRNA) Chordaria linearis ClinC8C monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-linearis_contig8.15716.1
Unique NamemRNA_C-linearis_contig8.15716.1
TypemRNA
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Homology
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BLAST of mRNA_C-linearis_contig8.15716.1 vs. uniprot
Match: D8LLX7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLX7_ECTSI)

HSP 1 Score: 371 bits (953), Expect = 8.500e-122
Identity = 186/222 (83.78%), Postives = 203/222 (91.44%), Query Frame = 3 
Query:  111 RRRFGCSIIGVIPGLACRRWLSDSTPADAPKP-TAAGAGTDGRTWTWSTPSPDRPGRGGAEIPVIPRINLTVDEVVSAIEAQGATDVRAIDLRGKGAGMGDFMVFSTATTPLHMRRLANMVVQALKRRKLANAMGITGAEGIDCDDWMLVDCDNLIVHFMTAEARQELDLETHWETVASGTALGAKRERGEEGYVEDPVDWEEDFGQEAAKAAGRGLPDGDR 773
            RRR   S +G +PGLACRRWLSDS+ +D P+P ++A A TDGRTWTWSTPSP+RPGRGGAEI VIPR+NLTVDEVV A+EAQG TDVRAIDLRGKGAGMGDFMVF TA TPL MRRLANMVVQALK+RKL NAMGITGAEGIDCDDWMLVDCDNLIVHFMTAEARQELDLETHWETVASGTALG+KR++GEEG+VEDPVDWEEDFGQEAAKAAGRG+ D +R
Sbjct:   25 RRRLP-STVGAVPGLACRRWLSDSS-SDTPRPPSSAAAATDGRTWTWSTPSPNRPGRGGAEIAVIPRVNLTVDEVVKAVEAQGGTDVRAIDLRGKGAGMGDFMVFCTAATPLQMRRLANMVVQALKQRKLVNAMGITGAEGIDCDDWMLVDCDNLIVHFMTAEARQELDLETHWETVASGTALGSKRKKGEEGHVEDPVDWEEDFGQEAAKAAGRGIIDENR 244
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BLAST of mRNA_C-linearis_contig8.15716.1 vs. uniprot
Match: A0A836CM28_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CM28_9STRA)

HSP 1 Score: 151 bits (381), Expect = 2.540e-37
Identity = 80/164 (48.78%), Postives = 112/164 (68.29%), Query Frame = 3 
Query:  156 ACRRWLSDSTPADAPKPTAAG---AGTDGRTWTWSTPSPDRPGRGGAEIPVIPRINLTVDEVVSAIEAQGATDVRAIDLRGKGAGMGDFMVFSTATTPLHMRRLANMVVQALKRRKLANAMGITGAEGIDCDDWMLVDCDNLIVHFMTAEARQELDLETHWETV 638
            A +   + S+ A +P  TAAG   +    R+WTWS+ +P + G G A+I V P++ LTV EVV+A+E  G TD+R + L GK + + D M+F T  +  HM+RL++++  ALKRRKL++A GITGAEG DCDDWM+VDC NLIVH   A+ R+EL+LE  WE +
Sbjct:   49 AAKNPTATSSGAKSPAGTAAGPDRSAVKARSWTWSSNAPRKAG-GSADIDVKPKVPLTVGEVVTALENNGGTDIRVVHLAGK-SDLADAMIFCTGRSMRHMQRLSDVITYALKRRKLSHAPGITGAEGYDCDDWMIVDCWNLIVHVFEAKYRKELNLEARWENI 210
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BLAST of mRNA_C-linearis_contig8.15716.1 vs. uniprot
Match: A0A7S2R5J7_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2R5J7_9STRA)

HSP 1 Score: 124 bits (312), Expect = 3.440e-28
Identity = 72/183 (39.34%), Postives = 102/183 (55.74%), Query Frame = 3 
Query:  159 CRRWLSDSTPADAPKPTAAGAGTDGRTWTWSTPSPDRPGRGGAEIPVIPRINLTVDEVVSAIEAQGATDVRAIDLRGKGAGMGDFMVFSTATTPLHMRRLANMVVQALKRRKLANAMGITGAEGIDCDDWMLVDCDNLIVHFMTAEARQELDLETHWETVASGTALGAKRERGEEGYVEDPVD 707
            C R L+ + P   P         +G +W W  P+       G +IPV+PR  LTV+EV +A+E      V  +D+ GK       MVF T     HMRR+A+++V ALK+RK+  A G +GAEG DCDDWM+VD  N+IVH M  +AR+ LDLE HW+   +    G   E   E ++E+ ++
Sbjct:   52 CARVLAATPPPSDP--------LEGLSWNWEPPAVVEQQAAGYQIPVVPRKYLTVEEVTTALEELRGMQVAVVDVTGKLEETSS-MVFCTGLGRTHMRRMADVLVSALKKRKI-KAPGASGAEGYDCDDWMIVDAGNIIVHLMNEKARRLLDLEAHWKNPEATLPQGGT-ESQREAHIEELIE 223
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BLAST of mRNA_C-linearis_contig8.15716.1 vs. uniprot
Match: A0A2D4BP62_PYTIN (Iojap-like ribosome-associated protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BP62_PYTIN)

HSP 1 Score: 120 bits (302), Expect = 9.860e-27
Identity = 64/145 (44.14%), Postives = 93/145 (64.14%), Query Frame = 3 
Query:  210 AAGAGTDGRTWTWSTPS----PDRPGRGGAEIPVIPRINLTVDEVVSAIEAQGATDVRAIDLRGKGAGMGDFMVFSTATTPLHMRRLANMVVQALKRRKLANAMGITGAEGIDCDDWMLVDCDNLIVHFMTAEARQELDLETHWE 632
            AA A + G +     PS    PD   R    IP IP+  LT+DEV++A+E + A DV  +DL GK + + DFMVF+T  +  HMRR+A+M++Q++K R + +    +  EG DCDDWM+ DC+N++VHFM  + R+ L+LE HWE
Sbjct:   86 AAAAASGGLSAAGDVPSEWEVPDAGKRNADIIPPIPQTYLTLDEVLAALEREKAIDVYTVDLAGKSS-LADFMVFTTGRSQAHMRRMADMLIQSMKARNIEDEFDYS-VEGRDCDDWMIADCNNIVVHFMREDTRRILNLEHHWE 228
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BLAST of mRNA_C-linearis_contig8.15716.1 vs. uniprot
Match: A0A3F2RH48_9STRA (Uncharacterized protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RH48_9STRA)

HSP 1 Score: 115 bits (287), Expect = 2.710e-25
Identity = 52/118 (44.07%), Postives = 82/118 (69.49%), Query Frame = 3 
Query:  291 IPVIPRINLTVDEVVSAIEAQGATDVRAIDLRGKGAGMGDFMVFSTATTPLHMRRLANMVVQALKRRKLANAMGITGAEGIDCDDWMLVDCDNLIVHFMTAEARQELDLETHWETVAS 644
            IP +P+  LT+DEV  A+E + A DV  +DL GK + + D+MVF+T  +  HMRR+A+++++++K R++ +     G EG DCDDWM+ DC+N++VH M A+ R+ L LE HWE + +
Sbjct:   69 IPAVPQTYLTIDEVQEALEREKAIDVYTVDLAGKSS-LADYMVFATGKSQAHMRRMADLLIKSMKAREIVDEFDY-GVEGRDCDDWMIADCNNIVVHLMHADTRRILALEDHWENMVN 184
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BLAST of mRNA_C-linearis_contig8.15716.1 vs. uniprot
Match: H3GI95_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GI95_PHYRM)

HSP 1 Score: 115 bits (289), Expect = 8.550e-25
Identity = 56/125 (44.80%), Postives = 85/125 (68.00%), Query Frame = 3 
Query:  258 SPDRPGRGGAEIPVIPRINLTVDEVVSAIEAQGATDVRAIDLRGKGAGMGDFMVFSTATTPLHMRRLANMVVQALKRRKLANAMGITGAEGIDCDDWMLVDCDNLIVHFMTAEARQELDLETHWE 632
            +PD   R    IP IP+  LT+DEV+ A+E + A DV  +DL GK + + DFMVF+T  +  HMRR+A+++++++K R++ +    +  EG DCDDWM+ DC+N++VH M A+ R+ L LE HWE
Sbjct:  137 APDAGNRHADIIPSIPQTYLTIDEVMEALEKEKAIDVYTVDLAGKSS-LADFMVFATGRSQAHMRRMADLLIKSMKVRQIVDDFDYS-VEGRDCDDWMIADCNNIVVHLMRADTRRILALEEHWE 259
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BLAST of mRNA_C-linearis_contig8.15716.1 vs. uniprot
Match: A0A5D6Y9S2_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y9S2_9STRA)

HSP 1 Score: 117 bits (292), Expect = 1.510e-24
Identity = 63/153 (41.18%), Postives = 94/153 (61.44%), Query Frame = 3 
Query:  174 SDSTPADAPKPTAAGAGTDGRTWTWSTPSPDRPGRGGAEIPVIPRINLTVDEVVSAIEAQGATDVRAIDLRGKGAGMGDFMVFSTATTPLHMRRLANMVVQALKRRKLANAMGITGAEGIDCDDWMLVDCDNLIVHFMTAEARQELDLETHWE 632
            ++   A    PTA  A   G    W+ P   +  R    IP IP+  LT+DEV++A+E + A DV  +DL GK + + D+M+F+T  +  HMRR+A+M++ +++ RKL +       EG DCDDWM+ DC+N++VHFM A+ R+ L LE HWE
Sbjct:  196 AEDAAASNADPTAL-ATAAGEVGEWAVPEVGK--RHADIIPPIPQTYLTLDEVLAALENEKAIDVYTVDLAGKSS-LADYMIFTTGRSQAHMRRMADMMIGSMRARKLVDEFEYA-VEGRDCDDWMIADCNNIVVHFMNADTRRILALEEHWE 343
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BLAST of mRNA_C-linearis_contig8.15716.1 vs. uniprot
Match: A0A7S1U8V2_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U8V2_9STRA)

HSP 1 Score: 112 bits (279), Expect = 1.580e-24
Identity = 65/134 (48.51%), Postives = 83/134 (61.94%), Query Frame = 3 
Query:  228 DGRTWTWSTPSPDRPGRGGAEIPVIPRINLTVDEVVSAIEAQGATDVRAIDLRGKGAGMGDFMVFSTATTPLHMRRLANMVVQALKRRKLANAMGITGAEGIDCDDWMLVDCDNLIVHFMTAEARQELDLETHW 629
            +G T+ W   +         EIPV+    L+V EVV+A++A GA D+RA+      AGM D MVF+T     H RRLAN+VV+AL+ RK+  A+G  G EG   DDWMLVD  N+I+H MTAEAR  L LE HW
Sbjct:    2 EGPTFEWGGSAAPAAVAATTEIPVVRGKALSVFEVVTALQANGAIDIRAVK-PDPAAGMCDTMVFATGLAAAHRRRLANVVVRALRARKI-KAIGRKGFEGAKDDDWMLVDAGNIILHVMTAEARAHLALERHW 133
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BLAST of mRNA_C-linearis_contig8.15716.1 vs. uniprot
Match: K3X3T5_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X3T5_GLOUD)

HSP 1 Score: 113 bits (282), Expect = 2.290e-24
Identity = 54/131 (41.22%), Postives = 85/131 (64.89%), Query Frame = 3 
Query:  246 WSTPSPDRPGRGGAEIPVIPRINLTVDEVVSAIEAQGATDVRAIDLRGKGAGMGDFMVFSTATTPLHMRRLANMVVQALKRRKLANAMGITGAEGIDCDDWMLVDCDNLIVHFMTAEARQELDLETHWETV 638
            W  P   +  R    IPVIP+   T+DEV++A+E + A +V  +DL GK + + D+M+F+T  +  HMRR+A+M++ +L+ R + +       EG DCDDWM+ DC+N++VHFM  + R+ L+LE HWE +
Sbjct:   83 WEVPEVGK--RHADMIPVIPQTYFTLDEVLAALEKEKAINVYTVDLAGKSS-LADYMIFTTGRSQAHMRRMADMMINSLRARNIEDDFNYV-VEGRDCDDWMIADCNNIVVHFMREDTRRILNLEDHWENM 209
[Close]
BLAST of mRNA_C-linearis_contig8.15716.1 vs. uniprot
Match: A0A329SL63_9STRA (Uncharacterized protein n=14 Tax=Phytophthora TaxID=4783 RepID=A0A329SL63_9STRA)

HSP 1 Score: 114 bits (286), Expect = 2.350e-24
Identity = 55/127 (43.31%), Postives = 84/127 (66.14%), Query Frame = 3 
Query:  258 SPDRPGRGGAEIPVIPRINLTVDEVVSAIEAQGATDVRAIDLRGKGAGMGDFMVFSTATTPLHMRRLANMVVQALKRRKLANAMGITGAEGIDCDDWMLVDCDNLIVHFMTAEARQELDLETHWETV 638
            +P+   R    IP IP+  LT+DEV  A+E + A DV  +DL GK + + DFMVF+T  +  HMRR+A+++++++K R++ +       EG DCDDWM+ DC+N++VH M A+ R+ L LE HWE +
Sbjct:  143 APEAGNRHADIIPAIPQTYLTIDEVQQALEREKAIDVYTVDLAGKSS-LADFMVFATGRSQAHMRRMADLLIKSMKAREIVDDFDYA-VEGRDCDDWMIADCNNIVVHLMRADTRRILALEDHWENM 267
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig8.15716.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LLX7_ECTSI8.500e-12283.78Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A836CM28_9STRA2.540e-3748.78Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2R5J7_9STRA3.440e-2839.34Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A2D4BP62_PYTIN9.860e-2744.14Iojap-like ribosome-associated protein n=1 Tax=Pyt... [more]
A0A3F2RH48_9STRA2.710e-2544.07Uncharacterized protein n=3 Tax=Phytophthora kerno... [more]
H3GI95_PHYRM8.550e-2544.80Uncharacterized protein n=1 Tax=Phytophthora ramor... [more]
A0A5D6Y9S2_9STRA1.510e-2441.18Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
A0A7S1U8V2_9STRA1.580e-2448.51Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
K3X3T5_GLOUD2.290e-2441.22Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
A0A329SL63_9STRA2.350e-2443.31Uncharacterized protein n=14 Tax=Phytophthora TaxI... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig8contigC-linearis_contig8:2857886..2861157 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score373.6
Seed ortholog evalue6.7e-101
Seed eggNOG ortholog2880.D8LLX7
Hectar predicted targeting categorymitochondrion
EggNOG free text desc.Ribosomal silencing factor during starvation
EggNOG OGs2E900@1,2SFE9@2759
Ec32 ortholog descriptionProtein Iojap/ribosomal silencing factor RsfS
Ec32 orthologEc-14_002040.1
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons3
Model size2038
Cds size708
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig8.15716.1prot_C-linearis_contig8.15716.1Chordaria linearis ClinC8C monoicouspolypeptideC-linearis_contig8 2859148..2861089 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930557.3457127-UTR-C-linearis_contig8:2857885..28591471622930557.3457127-UTR-C-linearis_contig8:2857885..2859147Chordaria linearis ClinC8C monoicousUTRC-linearis_contig8 2857886..2859147 -
1690881131.300291-UTR-C-linearis_contig8:2857885..28591471690881131.300291-UTR-C-linearis_contig8:2857885..2859147Chordaria linearis ClinC8C monoicousUTRC-linearis_contig8 2857886..2859147 -
1622930557.405664-UTR-C-linearis_contig8:2861089..28611571622930557.405664-UTR-C-linearis_contig8:2861089..2861157Chordaria linearis ClinC8C monoicousUTRC-linearis_contig8 2861090..2861157 -
1690881131.3509455-UTR-C-linearis_contig8:2861089..28611571690881131.3509455-UTR-C-linearis_contig8:2861089..2861157Chordaria linearis ClinC8C monoicousUTRC-linearis_contig8 2861090..2861157 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930557.36297-CDS-C-linearis_contig8:2859147..28594441622930557.36297-CDS-C-linearis_contig8:2859147..2859444Chordaria linearis ClinC8C monoicousCDSC-linearis_contig8 2859148..2859444 -
1690881131.3128176-CDS-C-linearis_contig8:2859147..28594441690881131.3128176-CDS-C-linearis_contig8:2859147..2859444Chordaria linearis ClinC8C monoicousCDSC-linearis_contig8 2859148..2859444 -
1622930557.38171-CDS-C-linearis_contig8:2859947..28601191622930557.38171-CDS-C-linearis_contig8:2859947..2860119Chordaria linearis ClinC8C monoicousCDSC-linearis_contig8 2859948..2860119 -
1690881131.3241313-CDS-C-linearis_contig8:2859947..28601191690881131.3241313-CDS-C-linearis_contig8:2859947..2860119Chordaria linearis ClinC8C monoicousCDSC-linearis_contig8 2859948..2860119 -
1622930557.3938596-CDS-C-linearis_contig8:2860850..28610891622930557.3938596-CDS-C-linearis_contig8:2860850..2861089Chordaria linearis ClinC8C monoicousCDSC-linearis_contig8 2860851..2861089 -
1690881131.338221-CDS-C-linearis_contig8:2860850..28610891690881131.338221-CDS-C-linearis_contig8:2860850..2861089Chordaria linearis ClinC8C monoicousCDSC-linearis_contig8 2860851..2861089 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-linearis_contig8.15716.1

>prot_C-linearis_contig8.15716.1 ID=prot_C-linearis_contig8.15716.1|Name=mRNA_C-linearis_contig8.15716.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=236bp
MLRPLASTAAHLAGRRRFGCSIIGVIPGLACRRWLSDSTPADAPKPTAAG
AGTDGRTWTWSTPSPDRPGRGGAEIPVIPRINLTVDEVVSAIEAQGATDV
RAIDLRGKGAGMGDFMVFSTATTPLHMRRLANMVVQALKRRKLANAMGIT
GAEGIDCDDWMLVDCDNLIVHFMTAEARQELDLETHWETVASGTALGAKR
ERGEEGYVEDPVDWEEDFGQEAAKAAGRGLPDGDR*
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mRNA from alignment at C-linearis_contig8:2857886..2861157-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-linearis_contig8.15716.1 ID=mRNA_C-linearis_contig8.15716.1|Name=mRNA_C-linearis_contig8.15716.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=3272bp|location=Sequence derived from alignment at C-linearis_contig8:2857886..2861157- (Chordaria linearis ClinC8C monoicous)
GAGGCAGCTTGTGGTGTCGTTTACATGTCAAGTGTCAAGGAAGGAAGGAA
GGAAGGAAGGAAGGCGCAATGCTTAGACCTCTCGCAAGCACCGCCGCACA
CCTAGCAGGGCGAAGAAGGTTCGGTTGCAGCATCATTGGCGTCATCCCGG
GGCTGGCGTGTCGACGATGGCTCAGCGACTCCACCCCAGCAGACGCACCG
AAACCTACTGCTGCCGGGGCTGGCACCGATGGGCGGACTTGGACGTGGTC
TACCCCGTCTCCCGACCGGCCTGGGAGAGGGGGAGCTGAAATACCCGTCA
TCCCGAGGTAGCTAGCTGTAGGACGACAAACGGGGCTGTACACAGCAGTA
GCGTGGGGTATAGGGCACAGAGACATGAGGGTTGGTTGGTTCACGGCGGT
GTGTTTTCGTTTTTCGAAAACCTCAAACAGCGGTCTACACCTCTTCCAAG
CGAGGTGACTCACAACGACATGTGCGCGAAAGGCGAAAGGCCTAAAGGTT
GCTCGGTGTCCTCTCCCTTATACTCTGGAAATACCGAGCGACCAACACCG
CAGCGAACACACACACACAGACACACACACACACACAAAATACACAAGAG
GCGCGACGTTTGTTTCCAACCCTGTCTCTCCTCGGAAGCTCGACACCACC
CATGAAAGTGACATGGCTTTATACGTCACTCTCTCAGAAAGCAAAGGGTA
CTTCGGCGGCGCCCTCGTTAGAACAATAATACTGCTGTCGCATCTTCTTG
CTTTTTCGCTGTGGAGTCGCCCCCCATCCCCAACAACAACGCCTCTATTT
AGACCAGTAGTCTTCGTCTCGGTCAATACGTTCCGTCGCTGAAAGCATCG
CTGCTTTCGTCGCTGAAAGCATCGCTGCTTTCATTACAACTCTGTACTCG
TCTCCATGATGTGCGGTCAGCGCTGTGAAAAGTTCACCACGTGGTTGCTG
TCACGGCGACCAACGGCCCAAATCCGCCCCTATGTACTTGCCCCCCACGC
GTGTGCACGTGCGGCATGTAACGCGCGAATGAATCCAGAATAAACCTCAC
CGTGGACGAGGTGGTGAGCGCAATAGAGGCGCAGGGGGCGACGGACGTCC
GCGCGATCGACCTGAGGGGGAAGGGCGCCGGCATGGGAGATTTCATGGTG
TTTTCCACGGCCACCACTCCCCTCCACATGCGGCGCCTTGCAAACATGGT
CGTTCAGGCGGTGAGATTGAGGTACAATAGCGACGGGGGAAAAGGAAGGG
AGAGGAACACGGGGTTGGAGCGTTAAATGGAGAACGAAACATCTATGCAT
AGGAGAGAAGGAAGGCACAGGCAGAGAGCAACCGTTGGTCGTGACGCCGT
GGCGAGCTCCGCTGCTCTTCGGTTTATTTCGGATAGAGGGCATCCACAGC
GAGCGCTGCGAGTTGGCAAAAGTCTCTCCGACCAGAGAGTATGAAATTCT
TCCTACCATTCTACATGCTTGGTTTTCACGGTCTCCTTCATATCACATCG
CAGCCACTCCTCCTGAAGGGTAGCACATACACACCTGAATTTACCGGCAG
TGCAGGCGAGCGTGCTGTCACAGCAGTCAGTCAGCACGGCTCTATTCTTC
TCGACGTCCCGAACACCGCAGCATCTTAACTCTGTTTCCTCCTGCATCCC
TTCCCCCCACCCCCCCCCGCCATCTCTTTGCCTCTCTCGTCTGCCCAAAA
CCTCCCCAAAAAGTTGAAACGCCGCAAGCTGGCGAACGCCATGGGCATCA
CGGGGGCGGAAGGGATCGACTGCGACGACTGGATGCTCGTGGACTGCGAC
AACCTGATCGTGCACTTCATGACGGCGGAAGCGCGGCAGGAGCTGGACCT
CGAGACACACTGGGAGACGGTCGCCAGCGGCACGGCCCTGGGCGCCAAGC
GCGAGAGGGGGGAGGAGGGGTACGTGGAGGACCCGGTGGATTGGGAGGAG
GATTTCGGGCAGGAGGCGGCCAAGGCGGCAGGGCGAGGGCTCCCCGATGG
CGACCGATGATGATATGACACACCGACTCGTGTGTGTTGCTTTTTTCCGG
GGGGGGGGGTGTGGGGGGAACGAACTTCTTGTTTTATTTCGTCCCCTCGC
CCCCCTCGCCTAGATAAGGCGCACCGCCTTTTTGTTGCGGGTGGTGAGTC
GGTGGTACAGGCTTTCTCGGACGAGCTTTATTCTTTTCGGACCCTGTTTT
TTCATCTTTTCCGCGACTTGTTTGTGCGGAGGCGAAGCGAAGACCCCATG
TATCGTGCACGCTTTTGCGTTTTGTGCAACAGACGTGACGAGCGGCGCGG
CGTACTATTTCGTGGTTCGCCTCAAGGCCTTTGCTTTGGGGTCTGGGTAT
TTGCGCGAAATAATTTACGCACGAAATACAGACCCAAGCCTTTAATTAAA
ATGAAAGGAAGGCGCGAAGGAGTATTTACGTACGAAGTATATTCGAGCGC
CTTGTTTTTGGCTGTTGGGATGGTTCGTTTTTATAGTGGCGGCTTTGTGG
GGGTGCGCGTGATCTGGCTACATAGAGCGGGCGGGGTTGAAGTGCGTGGG
GCGGAGACTGCGAAGAAAGTCTGGGATACGCACTCACCTGAAAGTCATGG
TATACATCACCACCAGTCGTCAAGATGACACATATCCCCGCCTGCCGATG
AACCGCTTGGGGCAGCGCTGGTTAGAGGTATTACAACCCTCGGGTGAATA
CCGGAGTCCAACAACAGCCTAACTAGCTGCTCGGACCCCGGTTGTACTCT
TGGTAGATGTACAACTTATCCACTGTACTAAATAGTCAGCGCTGACTGTT
TAGTACAGTGGATAAGTTGCATCAAACAGAACGTAAGCTGAGTTGGAAGA
AGCGTGGAAGGCCTTGAACCAGACAGACGCACTTCTGTTTTTTGTGAGGT
ACATAAGTGACGCCAGCTTACCGCTTTTACATCGTGCGCACCTCTAAGTT
CAGCATTGGTATTCACTGGGTTTACGTTGCAAGGGTGGTACTGGCCTGAA
TTTTGGATGATTCCTTGTTCTTGACGCGTAGGCGGACACCACGATGATTT
CGGCGGTCTTTGTTTTCGCTCGCAAGAAATGCGCGTTTTGTCGTGTTCCT
GTCTTCGATGTCGCCCTCGCACTTTAGAATGTCGGTGCACGATCTCGTCG
CATGCCTGTGTGCTTGCGCGTGTGCTTGTGTATTGTGGAAGAAGCAAGGC
CAAAATTCCAAGTGCCTGCATTGTCTTGCGCGCTGAGACACGCGGTCGTT
GCGCATTATGTTCTCTCTGGCG
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Coding sequence (CDS) from alignment at C-linearis_contig8:2857886..2861157-

>mRNA_C-linearis_contig8.15716.1 ID=mRNA_C-linearis_contig8.15716.1|Name=mRNA_C-linearis_contig8.15716.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=1416bp|location=Sequence derived from alignment at C-linearis_contig8:2857886..2861157- (Chordaria linearis ClinC8C monoicous)
ATGCTTAGACCTCTCGCAAGCACCGCCGCACACCTAGCAGGGCGAAGAAG
GTTCGGTTGCAGCATCATTGGCGTCATCCCGGGGCTGGCGTGTCGACGAT
GGCTCAGCGACTCCACCCCAGCAGACGCACCGAAACCTACTGCTGCCGGG
GCTGGCACCGATGGGCGGACTTGGACGTGGTCTACCCCGTCTCCCGACCG
GCCTGGGAGAGGGGGAGCTGAAATACCCGTCATCCCGAGATGCTTAGACC
TCTCGCAAGCACCGCCGCACACCTAGCAGGGCGAAGAAGGTTCGGTTGCA
GCATCATTGGCGTCATCCCGGGGCTGGCGTGTCGACGATGGCTCAGCGAC
TCCACCCCAGCAGACGCACCGAAACCTACTGCTGCCGGGGCTGGCACCGA
TGGGCGGACTTGGACGTGGTCTACCCCGTCTCCCGACCGGCCTGGGAGAG
GGGGAGCTGAAATACCCGTCATCCCGAGAATAAACCTCACCGTGGACGAG
GTGGTGAGCGCAATAGAGGCGCAGGGGGCGACGGACGTCCGCGCGATCGA
CCTGAGGGGGAAGGGCGCCGGCATGGGAGATTTCATGGTGTTTTCCACGG
CCACCACTCCCCTCCACATGCGGCGCCTTGCAAACATGGTCGTTCAGGCG
AATAAACCTCACCGTGGACGAGGTGGTGAGCGCAATAGAGGCGCAGGGGG
CGACGGACGTCCGCGCGATCGACCTGAGGGGGAAGGGCGCCGGCATGGGA
GATTTCATGGTGTTTTCCACGGCCACCACTCCCCTCCACATGCGGCGCCT
TGCAAACATGGTCGTTCAGGCGTTGAAACGCCGCAAGCTGGCGAACGCCA
TGGGCATCACGGGGGCGGAAGGGATCGACTGCGACGACTGGATGCTCGTG
GACTGCGACAACCTGATCGTGCACTTCATGACGGCGGAAGCGCGGCAGGA
GCTGGACCTCGAGACACACTGGGAGACGGTCGCCAGCGGCACGGCCCTGG
GCGCCAAGCGCGAGAGGGGGGAGGAGGGGTACGTGGAGGACCCGGTGGAT
TGGGAGGAGGATTTCGGGCAGGAGGCGGCCAAGGCGGCAGGGCGAGGGCT
CCCCGATGGCGACCGATGATTGAAACGCCGCAAGCTGGCGAACGCCATGG
GCATCACGGGGGCGGAAGGGATCGACTGCGACGACTGGATGCTCGTGGAC
TGCGACAACCTGATCGTGCACTTCATGACGGCGGAAGCGCGGCAGGAGCT
GGACCTCGAGACACACTGGGAGACGGTCGCCAGCGGCACGGCCCTGGGCG
CCAAGCGCGAGAGGGGGGAGGAGGGGTACGTGGAGGACCCGGTGGATTGG
GAGGAGGATTTCGGGCAGGAGGCGGCCAAGGCGGCAGGGCGAGGGCTCCC
CGATGGCGACCGATGA
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