mRNA_C-linearis_contig78.15365.1 (mRNA) Chordaria linearis ClinC8C monoicous
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Overview
Homology
BLAST of mRNA_C-linearis_contig78.15365.1 vs. uniprot
Match: A0A6H5KIB1_9PHAE (ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIB1_9PHAE) HSP 1 Score: 420 bits (1080), Expect = 2.780e-124 Identity = 258/568 (45.42%), Postives = 308/568 (54.23%), Query Frame = 3
Query: 48 MERFLHSICTHDDVELINSCVMGRSSARNASTLFDASIITFRNKYHD--GGPMMRTLCRAKGTPLFIARANNVYIRHERPGYAKETPAPNAPWPTGLHDEISSLDDAKTNVMPTLAFLAIGAPVVVHKKPQFVLLGVCNNSDGIVRGIELDLREDIFLNPTPGYSVVNLRYPPLRVFVYVKTADAAGLHLQGLDRGVVAIAPVEKDFTILGIGRQQDIHLQKAPAPTDSWLRFFGIP*PGPDHDKDNPRHSASSW*MHGQRYCLYCFVSRHESERSQLALSCRFGGSKPAAEQAYPCHRQVPRPA*PCDSQALPS*PFHLFAGLRIP*CGRQRRPHPV*KGTSSNHWSARAWCNTESRAPHRQQRQQPLLQYALALGLAAWDGLQLPPTHAGTPAVASFLTALQLLRDSMFNGSALPENIIASFFFSAARQARHDILSGTPIIIIGAGSDMGNVAGVFEAIARYCPLQGSHVWPANVHAQHALVVRTRRDFGLDWRYANNCNIDDHRMLQVTPDQSARLCHATVITMPDGASTTFHDNVFDCLRFPAPSDLSIP*QSLCPYRADAVHE 1745
MER L+S CT DDV+L+N+CVMG S+ RNA++ FDA I+TFRNK PMMR LC+A+GTPLF+ARA++VY++H+RPGYA+E PA NAPWPTGL +EI+SLDDAKT +PTLAFLA+GAPVVVHKKPQFVLLGVCNNSDGI+RGIELD RED L+PTPGYSVVNLRY PLRVFVY+KTAD AGLHL+GLDRGVVAIAPVEK+FTI GIG+++ I ++ + + H + L L +P PA A P RQRR G + A N+ + ALALGLAAWDG QLPP+ AGTPA SF +ALQLLRD MFNGS LP++I+ S F NC R +VTPDQSARL ATVIT+P+G S TF DNVF+ R AP+DL+IP QSL P AD+VHE
Sbjct: 1959 MERCLYSKCTEDDVKLLNTCVMGASTTRNATSAFDAIIVTFRNKVSTILTAPMMRALCQARGTPLFVARAHDVYVKHQRPGYAEEKPATNAPWPTGLREEINSLDDAKTKDLPTLAFLAVGAPVVVHKKPQFVLLGVCNNSDGIIRGIELDPREDFLLDPTPGYSVVNLRYAPLRVFVYIKTADDAGLHLEGLDRGVVAIAPVEKEFTIEGIGKRKFIFKRRQLPDILGIINYL------------------------------------HRLGKETLKL--------------FPQDASTFTPASASLDAATDEGPTS---------SRRQRRRTTGRHGPGAARRVAHLIANSNNNC---------FFNSALALGLAAWDGQQLPPSSAGTPAAGSFFSALQLLRDCMFNGSTLPDHIVESSF--------------------------------------------------------------------------NC----FRAREVTPDQSARLRGATVITIPNGVSATFQDNVFNFFRTSAPTDLAIPGQSLYPCCADSVHE 2380
BLAST of mRNA_C-linearis_contig78.15365.1 vs. uniprot
Match: A0A6H5KPV6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPV6_9PHAE) HSP 1 Score: 314 bits (805), Expect = 1.620e-93 Identity = 183/347 (52.74%), Postives = 207/347 (59.65%), Query Frame = 3
Query: 1158 ALALGLAAWDGLQLPPTHAGTPAVASFLTALQLLRDSMFNGSALPENIIASFFFSAARQARHDILSGTPIIIIGAGSDMGNVAGVFEAIARYCPLQGSHVWPANVHAQHALVVRTRRDFGLDWRYANNCNIDDHRMLQVTPDQSARLCHATVITMPDGASTTFHDNVFDCLRFPAPSDLSIP*QSLCPYRADAVHETLCYWTLLPWTPETAPDSFFFRSGNVSQDLHGNPMSPSMTFSLGASYSLVGVS*HLAFGAGSRNHFASQVRLRGRWHTYDCLDGGVVTSSDSYDSAWNAPSLHLLVYLRTALCVATPAAYSQPSATPGRQSRYHQRAGPTRTSESTSPSGR 2198
ALALGLAAWDG P+ P L + N S P +I+ SAARQARHDIL GTPI GAG DMGNVAGVFEAIAR CP QGS +WP +V Q A V RTRRDFGLDWRYANNC I +H +VTPDQSARL ATVIT+P+G S TF DNVFD R AP+DL+IP QSLCPY AD VH +C WTLLPWT TAPD FFRS V + L GRWH YDCL GG+VTSSD+YDS W+ S+H+LVYLR+A+CVATP Y+ SA +S + A SE TSPSGR
Sbjct: 366 ALALGLAAWDG----PSPCPPPVC--------LHNNLQPNASFFPPSILRQ---SAARQARHDILHGTPIT--GAGCDMGNVAGVFEAIARACPRQGSPLWPDSVFDQQARVARTRRDFGLDWRYANNCTIGNHSAREVTPDQSARLRAATVITIPNGVSATFQDNVFDFFRSSAPTDLAIPGQSLCPYCADNVHRNMCDWTLLPWTSNTAPDRIFFRSSCVFRG------------------------------------------LCGRWHKYDCLQGGIVTSSDAYDSGWHVSSVHMLVYLRSAICVATPPPYAPSSA--ATRSNVPRNACRVVQSEPTSPSGR 651
BLAST of mRNA_C-linearis_contig78.15365.1 vs. uniprot
Match: D7G2I1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2I1_ECTSI) HSP 1 Score: 294 bits (752), Expect = 5.810e-88 Identity = 197/454 (43.39%), Postives = 243/454 (53.52%), Query Frame = 3
Query: 48 MERFLHSICTHDDVELINSCVMGRSSARNASTLFDASIITFRNKYHD--GGPMMRTLCRAKGTPLFIARANNVYIRHERPGYAKETPAPNAPWPTGLHDEISSLDDAKTNVMPTLAFLAIGAPVVVHKKPQFVLLGVCNNSDGIVRGIELDLREDIFLNPTPGYSVVNLRYPPLRVFVYVKTADAAGLHLQGLDRGVVAIAPVEKDFTILGIGRQQDIHLQKAPAPTDSWL----RFFGIP*PGPDHD-KDNPRHSASSW*MH---------GQRYCLYCFVSR-----------------HESERSQLALSCRFGGS-KPAAEQAYPCHRQVPRPA*PCDSQALPS*PFHLFAGLRIP*CGRQRRPHPV*K-GTSSNHWSARAWCNTESRAPHRQQRQQPLLQYALALGLAAWDGLQLPPTHAGTPAVASFLTALQLLRDSMFNGSALPENII 1304
MER L S C DDV+LIN+ VMG S R A +LFDA +I FRNK + PMMRT C+AKGT LFIA A++VY+ H+RPG E P +APWP GL EI SLDD KTN +PT A LAIGAPVV+HK PQFVLLGVCNNSDGI+RGIELD RE + + T GYSVV LRY PLR+FVY+K+ADAAGLHL GL RGV+A+APVE+ FTI+GI +++ ++ T L R G P D + P H+ ++ G L+ + H + + + L + GS PA PRP ++P V + G + A N ++ ALAL LAAWDG LP T AGTPA SF ALQLLRDSMF+ L NI+
Sbjct: 16 MERCLRSECISDDVDLINNHVMGTS--RKADSLFDARVIAFRNKVNTVLTVPMMRTWCKAKGTTLFIAAAHDVYVGHQRPGATAEVPPTDAPWPAGLRREIKSLDDGKTNDLPTSACLAIGAPVVLHKSPQFVLLGVCNNSDGIIRGIELDPREG-YASSTAGYSVVTLRYAPLRIFVYIKSADAAGLHLDGLQRGVIAVAPVERKFTIVGINKRKFTFKRRQIPLTAGCLSSVYRSQGQTMPKIILDIRRPPGHAVDCAAVYVALSRATGLGDLNLLFPVTLQDLNQPQNPDIVAIVNYLHRLDETTMVLFLKDPGSFTPAYATLDGIEEAGPRPP--------------------------HKQPKRVGRHGPGATRRVAHLIPNEDNNC---------FFNSALALALAAWDGQPLPDTTAGTPAAGSFFAALQLLRDSMFDECDLSPNIV 431
BLAST of mRNA_C-linearis_contig78.15365.1 vs. uniprot
Match: A0A6H5K6P6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6P6_9PHAE) HSP 1 Score: 279 bits (714), Expect = 8.410e-84 Identity = 150/267 (56.18%), Postives = 171/267 (64.04%), Query Frame = 3
Query: 1158 ALALGLAAWDGLQLPPTHAGTPAVASFLTALQLLRDSMFNGSALPENIIASFFFSAARQARHDILSGTPIIIIGAGSDMGNVAGVFEAIARYCPLQGSHVWPANVHAQHALVVRTRRDFGLDWRYANNCNIDDHRMLQVTPDQSARLCHATVITMPDGASTTFHDNVFDCLRFPAPSDLSIP*QSLCPYRADAVHETLCYWTLLPWTPETAPDSFFFRSGNVSQDLHGNPMSPSMTFSLGASYSLVGVS*HLAFGAGS-RNHFASQV 1955
ALALGLAAWDG QLPP+ AGTPA SF +ALQLLRDSMF+GSALP++I+ GS +WP +V Q A V RTRRDFGLDWRYANNC I +H +VTPDQSARL ATVIT+P+G S TF DNVFD R AP+DL+IP QSLCPY AD VH +C WTLLPWT TAPD FFRS V + L G PM+PSMTF++GA+YSLVGVS L G G+ RNHF SQV
Sbjct: 131 ALALGLAAWDGQQLPPSSAGTPAAGSFFSALQLLRDSMFDGSALPDHIV-----------------------------------------------GSPLWPDSVFDQQARVARTRRDFGLDWRYANNCTIGNHSAREVTPDQSARLRAATVITIPNGVSATFQDNVFDFFRSSAPTDLAIPGQSLCPYCADNVHRNMCDWTLLPWTSNTAPDRIFFRSSCVFRGLDGRPMAPSMTFTMGAAYSLVGVSYFLPLGGGTNRNHFVSQV 350
BLAST of mRNA_C-linearis_contig78.15365.1 vs. uniprot
Match: D7G3U9_ECTSI (ATP-dependent DNA helicase n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3U9_ECTSI) HSP 1 Score: 294 bits (752), Expect = 4.310e-81 Identity = 197/454 (43.39%), Postives = 243/454 (53.52%), Query Frame = 3
Query: 48 MERFLHSICTHDDVELINSCVMGRSSARNASTLFDASIITFRNKYHD--GGPMMRTLCRAKGTPLFIARANNVYIRHERPGYAKETPAPNAPWPTGLHDEISSLDDAKTNVMPTLAFLAIGAPVVVHKKPQFVLLGVCNNSDGIVRGIELDLREDIFLNPTPGYSVVNLRYPPLRVFVYVKTADAAGLHLQGLDRGVVAIAPVEKDFTILGIGRQQDIHLQKAPAPTDSWL----RFFGIP*PGPDHD-KDNPRHSASSW*MH---------GQRYCLYCFVSR-----------------HESERSQLALSCRFGGS-KPAAEQAYPCHRQVPRPA*PCDSQALPS*PFHLFAGLRIP*CGRQRRPHPV*K-GTSSNHWSARAWCNTESRAPHRQQRQQPLLQYALALGLAAWDGLQLPPTHAGTPAVASFLTALQLLRDSMFNGSALPENII 1304
MER L S C DDV+LIN+ VMG S R A +LFDA +I FRNK + PMMRT C+AKGT LFIA A++VY+ H+RPG E P +APWP GL EI SLDD KTN +PT A LAIGAPVV+HK PQFVLLGVCNNSDGI+RGIELD RE + + T GYSVV LRY PLR+FVY+K+ADAAGLHL GL RGV+A+APVE+ FTI+GI +++ ++ T L R G P D + P H+ ++ G L+ + H + + + L + GS PA PRP ++P V + G + A N ++ ALAL LAAWDG LP T AGTPA SF ALQLLRDSMF+ L NI+
Sbjct: 1723 MERCLRSECISDDVDLINNHVMGTS--RKADSLFDARVIAFRNKVNTVLTVPMMRTWCKAKGTTLFIAAAHDVYVGHQRPGATAEVPPTDAPWPAGLRREIKSLDDGKTNDLPTSACLAIGAPVVLHKSPQFVLLGVCNNSDGIIRGIELDPREG-YASSTAGYSVVTLRYAPLRIFVYIKSADAAGLHLDGLQRGVIAVAPVERKFTIVGINKRKFTFKRRQIPLTAGCLSSVYRSQGQTMPKIILDIRRPPGHAVDCAAVYVALSRATGLGDLNLLFPVTLQDLNQPQNPDIVAIVNYLHRLDETTMVLFLKDPGSFTPAYATLDGIEEAGPRPP--------------------------HKQPKRVGRHGPGATRRVAHLIPNEDNNC---------FFNSALALALAAWDGQPLPDTTAGTPAAGSFFAALQLLRDSMFDECDLSPNIV 2138
BLAST of mRNA_C-linearis_contig78.15365.1 vs. uniprot
Match: A0A6H5KXW4_9PHAE (ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXW4_9PHAE) HSP 1 Score: 267 bits (683), Expect = 8.770e-75 Identity = 156/289 (53.98%), Postives = 184/289 (63.67%), Query Frame = 3
Query: 48 MERFLHSICTHDDVELINSCVMGRSSARNASTLFDASIITFRNKYHDGGPMMRTLCRAKGTPLFIARANNVYIRHERPGYAKETPAPNAPWPTGLHDEISSLDDAKTNVMPTLAFLAIGAPVVVHKKPQFVLLGVCNNSDGIVRGIELDLREDIFLNPTPGYSVVNLRYPPLRVFVYVKTADAAGLHLQGLDRGVVAIAPVEKDFTILGIGRQQDIHLQKA-PAPT---DSWLRFFGIP*PGPDHDKDNPRHSASSW*MHGQRYCLYCFVSRHESERSQLALSCRFGGS 902
MER L+S CT DDV L+N+CVMG S+ RNA++ FDASIITFRNK + + T A F+ + + PA NAPWPTGL +EI+SLDDA T +PTLAFLA+GAPVVVHK+PQFVLLGVCNNSDGI+RGIELD ED L+PTPGYSVVNLRY PL+VFVY+KTAD AGLHL+GLDRGVVAIAPVEK+ TI GIG+ + I ++ P P S R G P D P +A G CF R+ LAL F S
Sbjct: 511 MERCLYSKCTEDDVRLLNTCVMGASTTRNATSAFDASIITFRNKEY----ALATRTNAPSPIPFLHL------------FFPQKPATNAPWPTGLREEINSLDDANTKDLPTLAFLAVGAPVVVHKRPQFVLLGVCNNSDGIIRGIELDPLEDFLLDPTPGYSVVNLRYAPLQVFVYIKTADDAGLHLEGLDRGVVAIAPVEKECTIEGIGKGKFIFKRRQLPLPAGCVSSVFRSQGQTMPKIILDIHPPPGTAMKG---GSTSTFICFRFVSRLPRASLALPYAFFSS 780
BLAST of mRNA_C-linearis_contig78.15365.1 vs. uniprot
Match: A0A6H5K882_9PHAE (ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K882_9PHAE) HSP 1 Score: 197 bits (501), Expect = 7.920e-49 Identity = 143/426 (33.57%), Postives = 206/426 (48.36%), Query Frame = 3
Query: 54 RFLHSICTHDDVELINSCVMGRSSARNASTLFDASIITFRNKYHDG--GPMMRTLCRAKGTPLFIARANNVYIRHERPGYAKETPAPNAPWPTGLHDEISSLDDAKTNVMPTLAFLAIGAPVVVHKKPQFVLLGVCNNSDGIVRGIELDLREDIFLNPTPGYSVVNLRYPPLRVFVYVKTADAAGLHLQGLDRGVVAIAPVEKDFTILGI-GRQQDIHLQKAPAPTDSWLRFFGI-----P*PGPDHDKDNPRHSASSW*MHGQRYCLYCFVSRHESERSQLALSCRFGGSKPAAEQAYPCHRQVPRPA*PCDSQALPS*PFHLFAGLRIP*CGRQRRPHPV*KGTSSNHWSARAWCNTESRAPHRQQRQQP--LLQYALALGLAAWDGLQLPPTHAGTPAVASFLTALQLLRDSMFNGSALPENI 1301
RFLHS T+ DV N+ V+ + +A+ +D +IT RNK P MRT C+++GT LFI+ A + ++ E G KETP A WP L +E++SLDD KT +P LA+G P+VVHK PQ VLLGVC+N DGIVR IELD RE I N GY VV+L++ P+RVFV++++ D +GL L G RGVVA P+E++ + G GR I ++ P T L + PGP D + + S Y L+ S + + A+ P P + +LP+ +G G + W A + + H A+AL LA +DG P TPA +F A++L++D+M +G+ +PE+I
Sbjct: 1210 RFLHSRSTYSDVIKFNTRVLNGTPGLSAADCYDGKVITLRNKVTTALTMPTMRTWCQSRGTTLFISSATDEFVGDEGGGRPKETPQAGAAWPPCLRNEVNSLDDTKTKDLPRQLCLAVGVPIVVHKSPQHVLLGVCSNRDGIVRAIELDQREQI-QNHDGGYRVVHLKHLPVRVFVHIESMDDSGLKLPGFPRGVVAFGPIERNVVLTGKNGRNFTIKRRQLPL-TSGCLSSVRVILDLRKPPGPRVDPASLYVARSRAKSLNDTYLLFPVTLNDLSRPRDADVVALIDCLRRLAKDTLNAFTSDPSTFIP-SATSLPT-DSDYDSGEN--------------DGGRGSGWLGGASRRRQLQPAHLMPNSANNCFFNSAIALCLAVFDGHTPPNFSDCTPAATAFCPAIRLVKDNMLSGAPMPEHI 1617
BLAST of mRNA_C-linearis_contig78.15365.1 vs. uniprot
Match: A0A6H5KDI5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDI5_9PHAE) HSP 1 Score: 171 bits (433), Expect = 2.220e-45 Identity = 90/154 (58.44%), Postives = 108/154 (70.13%), Query Frame = 3
Query: 1752 CYWTLLPWTPETAPDSFFFRSGNVSQDLHGNPMSPSMTFSLGASYSLVGVS*HLAFGAG-SRNHFASQVRLRGRWHTYDCLDGGVVTSSDSYDSAWNAPSLHLLVYLRTALCVATPAAYSQPSATP----GRQSRYHQRAGPTRTSESTSPSGR 2198
C WTLLPWTP TAPD F RS V + LHG PMSPSMTF++G +YSLVG+S LA G G +RNHF SQV +RGRWH DCL GG+VTSSD++ S W+ S+H+LVYLR+++CVATP Y+ SAT GR + Q SE TSPSGR
Sbjct: 62 CDWTLLPWTPNTAPDRIFVRSSCVFRGLHGRPMSPSMTFTMGVTYSLVGISCFLALGGGPNRNHFVSQVWIRGRWHKDDCLQGGIVTSSDAFGSGWHVSSVHMLVYLRSSICVATPPPYAPSSATTRSNVGRNACRVQ-------SEPTSPSGR 208
BLAST of mRNA_C-linearis_contig78.15365.1 vs. uniprot
Match: A0A6H5JN07_9PHAE (ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN07_9PHAE) HSP 1 Score: 171 bits (434), Expect = 2.300e-40 Identity = 150/467 (32.12%), Postives = 207/467 (44.33%), Query Frame = 3
Query: 48 MERFLHSICTHDDVELINSCVMGRSSARNASTLFDASIITFRNKYHDGGPMMRTLCRAKGTPLFIARANNVYIRHERPGYAKETPAPNAPWPTGLHDEISSLDDAKTNVMPTLAFLAIGAPVVVHKKPQFVLLGVCNNSDGIVRGIELDLREDIFLNPTPGYSVVNLRYPPLRVFVYVKTADAAGLHLQGLDRGVVAIAPVEKDFTILGIGRQQDIHLQKAPAP-TDSWLRFFGIP*PGPDHDKDNPRHSASSW*MHGQRYCLYCFVSRHESERSQLALSCRFGGSKPAAEQAYPCHRQVPRPA*PCDSQALPS*PFHLFAGLRIP*CGRQRRP--------------------HP-------V*KGTSSNHWSARAWCNTES---RAPHRQQRQQP-----------------LLQYALALGLAAWDGLQLPPTHAGTPAVASFLTALQLLRDSMFNGSALPENII 1304
M+R L S T++D+ L ++ V+ S +A +D + T PMMRT C+A TPLFIA A + ++ ERPG L DEISSLDDAKTN +PTLA LAIGAPVV+HK+PQFV+LGVCNNSDGI+RGIE+ RE+ VFVY++TA AGL L L RGV ++ PVE++F+I+ ++ + P T L G + ASS CLY + H ++ L + KP P + S+A +L + + R R HP SS+ + NT + R R R P L A+AL LAA+DGL P TPA A+F A++L++D+MFNG +L ++ +
Sbjct: 1627 MDRLLLSSPTYNDIRLFDTRVLNGSPGLHAFDCYDGRVNTVLTV-----PMMRTWCKANITPLFIAPAMDSFVGDERPG---------------LRDEISSLDDAKTNDLPTLACLAIGAPVVLHKQPQFVILGVCNNSDGIIRGIEITQREE--------------------VFVYIQTAYDAGLKLPDLCRGVTSVGPVERNFSIVITKTKRKFTFSRKQVPLTAGCLSALGSD------------YIASS--------CLYHPILSHCVSLRRIILDLQ----KPPQPLVDPASSYL------ALSRATYLEDLYLLFPVTLEDLSRPRNKDVVALIEFLHRLEETTSLLSHPDRSTFTLTSASLSSDGDAIDGEDNTSTGRTRGGSRPGRHLPASTPSIARLIANKNNNYFLNSAMALTLAAFDGLSPPDGRDCTPAGAAFFPAIKLIQDTMFNGESLQQDTL 2023
BLAST of mRNA_C-linearis_contig78.15365.1 vs. uniprot
Match: A0A6H5L437_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L437_9PHAE) HSP 1 Score: 136 bits (343), Expect = 9.090e-34 Identity = 71/126 (56.35%), Postives = 91/126 (72.22%), Query Frame = 3
Query: 339 EISSLDDAKTNVMPTLAFLAIGAPVVVHKKPQFVLLGVCNNSDGIVRGIELDLREDIFLNPTPGYSVVNLRYPPLRVFVYVKTADAAGLHLQGLDRGVVAIAPVEKDFTILGI-GRQQDIHLQKAP 713
E++ LDDAKT +P LA+G P+VV+K PQ VLLGVCNNSDGIVR IEL RE + N GY VV+L+YPP+RVFV++++AD AGL L GL RGVVA PVE++F + G GR+ I ++ P
Sbjct: 16 EVNPLDDAKTKGLPRQLCLAVGIPIVVYKSPQHVLLGVCNNSDGIVRAIELYQREQV-QNHNDGYRVVHLKYPPVRVFVHIESADDAGLKLPGLPRGVVAFGPVERNFVLTGNNGRKFTIKRRQLP 140 The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig78.15365.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 15
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig78.15365.1 >prot_C-linearis_contig78.15365.1 ID=prot_C-linearis_contig78.15365.1|Name=mRNA_C-linearis_contig78.15365.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=236bp MERFLHSICTHDDVELINSCVMGRSSARNASTLFDASIITFRNKYHDGGPback to top mRNA from alignment at C-linearis_contig78:521907..524688+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-linearis_contig78.15365.1 ID=mRNA_C-linearis_contig78.15365.1|Name=mRNA_C-linearis_contig78.15365.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=2782bp|location=Sequence derived from alignment at C-linearis_contig78:521907..524688+ (Chordaria linearis ClinC8C monoicous)back to top Coding sequence (CDS) from alignment at C-linearis_contig78:521907..524688+ >mRNA_C-linearis_contig78.15365.1 ID=mRNA_C-linearis_contig78.15365.1|Name=mRNA_C-linearis_contig78.15365.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=1416bp|location=Sequence derived from alignment at C-linearis_contig78:521907..524688+ (Chordaria linearis ClinC8C monoicous)back to top |