prot_C-linearis_contig78.15365.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig78.15365.1
Unique Nameprot_C-linearis_contig78.15365.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length236
Homology
BLAST of mRNA_C-linearis_contig78.15365.1 vs. uniprot
Match: A0A6H5KIB1_9PHAE (ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIB1_9PHAE)

HSP 1 Score: 338 bits (868), Expect = 1.590e-103
Identity = 162/222 (72.97%), Postives = 193/222 (86.94%), Query Frame = 0
Query:    1 MERFLHSICTHDDVELINSCVMGRSSARNASTLFDASIITFRNKYHD--GGPMMRTLCRAKGTPLFIARANNVYIRHERPGYAKETPAPNAPWPTGLHDEISSLDDAKTNVMPTLAFLAIGAPVVVHKKPQFVLLGVCNNSDGIVRGIELDLREDIFLNPTPGYSVVNLRYPPLRVFVYVKTADAAGLHLQGLDRGVVAIAPVEKDFTILGIGRQQDIHLQK 220
            MER L+S CT DDV+L+N+CVMG S+ RNA++ FDA I+TFRNK       PMMR LC+A+GTPLF+ARA++VY++H+RPGYA+E PA NAPWPTGL +EI+SLDDAKT  +PTLAFLA+GAPVVVHKKPQFVLLGVCNNSDGI+RGIELD RED  L+PTPGYSVVNLRY PLRVFVY+KTAD AGLHL+GLDRGVVAIAPVEK+FTI GIG+++ I  ++
Sbjct: 1959 MERCLYSKCTEDDVKLLNTCVMGASTTRNATSAFDAIIVTFRNKVSTILTAPMMRALCQARGTPLFVARAHDVYVKHQRPGYAEEKPATNAPWPTGLREEINSLDDAKTKDLPTLAFLAVGAPVVVHKKPQFVLLGVCNNSDGIIRGIELDPREDFLLDPTPGYSVVNLRYAPLRVFVYIKTADDAGLHLEGLDRGVVAIAPVEKEFTIEGIGKRKFIFKRR 2180          
BLAST of mRNA_C-linearis_contig78.15365.1 vs. uniprot
Match: D7G2I1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2I1_ECTSI)

HSP 1 Score: 274 bits (700), Expect = 6.810e-87
Identity = 140/216 (64.81%), Postives = 166/216 (76.85%), Query Frame = 0
Query:    1 MERFLHSICTHDDVELINSCVMGRSSARNASTLFDASIITFRNKYHD--GGPMMRTLCRAKGTPLFIARANNVYIRHERPGYAKETPAPNAPWPTGLHDEISSLDDAKTNVMPTLAFLAIGAPVVVHKKPQFVLLGVCNNSDGIVRGIELDLREDIFLNPTPGYSVVNLRYPPLRVFVYVKTADAAGLHLQGLDRGVVAIAPVEKDFTILGIGRQQ 214
            MER L S C  DDV+LIN+ VMG S  R A +LFDA +I FRNK +     PMMRT C+AKGT LFIA A++VY+ H+RPG   E P  +APWP GL  EI SLDD KTN +PT A LAIGAPVV+HK PQFVLLGVCNNSDGI+RGIELD RE  + + T GYSVV LRY PLR+FVY+K+ADAAGLHL GL RGV+A+APVE+ FTI+GI +++
Sbjct:   16 MERCLRSECISDDVDLINNHVMGTS--RKADSLFDARVIAFRNKVNTVLTVPMMRTWCKAKGTTLFIAAAHDVYVGHQRPGATAEVPPTDAPWPAGLRREIKSLDDGKTNDLPTSACLAIGAPVVLHKSPQFVLLGVCNNSDGIIRGIELDPREG-YASSTAGYSVVTLRYAPLRIFVYIKSADAAGLHLDGLQRGVIAVAPVERKFTIVGINKRK 228          
BLAST of mRNA_C-linearis_contig78.15365.1 vs. uniprot
Match: D7G3U9_ECTSI (ATP-dependent DNA helicase n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3U9_ECTSI)

HSP 1 Score: 274 bits (700), Expect = 5.900e-81
Identity = 140/216 (64.81%), Postives = 166/216 (76.85%), Query Frame = 0
Query:    1 MERFLHSICTHDDVELINSCVMGRSSARNASTLFDASIITFRNKYHD--GGPMMRTLCRAKGTPLFIARANNVYIRHERPGYAKETPAPNAPWPTGLHDEISSLDDAKTNVMPTLAFLAIGAPVVVHKKPQFVLLGVCNNSDGIVRGIELDLREDIFLNPTPGYSVVNLRYPPLRVFVYVKTADAAGLHLQGLDRGVVAIAPVEKDFTILGIGRQQ 214
            MER L S C  DDV+LIN+ VMG S  R A +LFDA +I FRNK +     PMMRT C+AKGT LFIA A++VY+ H+RPG   E P  +APWP GL  EI SLDD KTN +PT A LAIGAPVV+HK PQFVLLGVCNNSDGI+RGIELD RE  + + T GYSVV LRY PLR+FVY+K+ADAAGLHL GL RGV+A+APVE+ FTI+GI +++
Sbjct: 1723 MERCLRSECISDDVDLINNHVMGTS--RKADSLFDARVIAFRNKVNTVLTVPMMRTWCKAKGTTLFIAAAHDVYVGHQRPGATAEVPPTDAPWPAGLRREIKSLDDGKTNDLPTSACLAIGAPVVLHKSPQFVLLGVCNNSDGIIRGIELDPREG-YASSTAGYSVVTLRYAPLRIFVYIKSADAAGLHLDGLQRGVIAVAPVERKFTIVGINKRK 1935          
BLAST of mRNA_C-linearis_contig78.15365.1 vs. uniprot
Match: A0A6H5KXW4_9PHAE (ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXW4_9PHAE)

HSP 1 Score: 266 bits (679), Expect = 1.210e-80
Identity = 138/220 (62.73%), Postives = 164/220 (74.55%), Query Frame = 0
Query:    1 MERFLHSICTHDDVELINSCVMGRSSARNASTLFDASIITFRNKYHDGGPMMRTLCRAKGTPLFIARANNVYIRHERPGYAKETPAPNAPWPTGLHDEISSLDDAKTNVMPTLAFLAIGAPVVVHKKPQFVLLGVCNNSDGIVRGIELDLREDIFLNPTPGYSVVNLRYPPLRVFVYVKTADAAGLHLQGLDRGVVAIAPVEKDFTILGIGRQQDIHLQK 220
            MER L+S CT DDV L+N+CVMG S+ RNA++ FDASIITFRNK +     + T   A     F+              +  + PA NAPWPTGL +EI+SLDDA T  +PTLAFLA+GAPVVVHK+PQFVLLGVCNNSDGI+RGIELD  ED  L+PTPGYSVVNLRY PL+VFVY+KTAD AGLHL+GLDRGVVAIAPVEK+ TI GIG+ + I  ++
Sbjct:  511 MERCLYSKCTEDDVRLLNTCVMGASTTRNATSAFDASIITFRNKEY----ALATRTNAPSPIPFLHL------------FFPQKPATNAPWPTGLREEINSLDDANTKDLPTLAFLAVGAPVVVHKRPQFVLLGVCNNSDGIIRGIELDPLEDFLLDPTPGYSVVNLRYAPLQVFVYIKTADDAGLHLEGLDRGVVAIAPVEKECTIEGIGKGKFIFKRR 714          
BLAST of mRNA_C-linearis_contig78.15365.1 vs. uniprot
Match: A0A6H5K882_9PHAE (ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K882_9PHAE)

HSP 1 Score: 191 bits (484), Expect = 5.690e-52
Identity = 103/223 (46.19%), Postives = 140/223 (62.78%), Query Frame = 0
Query:    3 RFLHSICTHDDVELINSCVMGRSSARNASTLFDASIITFRNKYHDG--GPMMRTLCRAKGTPLFIARANNVYIRHERPGYAKETPAPNAPWPTGLHDEISSLDDAKTNVMPTLAFLAIGAPVVVHKKPQFVLLGVCNNSDGIVRGIELDLREDIFLNPTPGYSVVNLRYPPLRVFVYVKTADAAGLHLQGLDRGVVAIAPVEKDFTILGI-GRQQDIHLQKAP 222
            RFLHS  T+ DV   N+ V+  +   +A+  +D  +IT RNK       P MRT C+++GT LFI+ A + ++  E  G  KETP   A WP  L +E++SLDD KT  +P    LA+G P+VVHK PQ VLLGVC+N DGIVR IELD RE I  N   GY VV+L++ P+RVFV++++ D +GL L G  RGVVA  P+E++  + G  GR   I  ++ P
Sbjct: 1210 RFLHSRSTYSDVIKFNTRVLNGTPGLSAADCYDGKVITLRNKVTTALTMPTMRTWCQSRGTTLFISSATDEFVGDEGGGRPKETPQAGAAWPPCLRNEVNSLDDTKTKDLPRQLCLAVGVPIVVHKSPQHVLLGVCSNRDGIVRAIELDQREQI-QNHDGGYRVVHLKHLPVRVFVHIESMDDSGLKLPGFPRGVVAFGPIERNVVLTGKNGRNFTIKRRQLP 1431          
BLAST of mRNA_C-linearis_contig78.15365.1 vs. uniprot
Match: A0A6H5JN07_9PHAE (ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN07_9PHAE)

HSP 1 Score: 163 bits (412), Expect = 2.610e-42
Identity = 96/208 (46.15%), Postives = 125/208 (60.10%), Query Frame = 0
Query:    1 MERFLHSICTHDDVELINSCVMGRSSARNASTLFDASIITFRNKYHDGGPMMRTLCRAKGTPLFIARANNVYIRHERPGYAKETPAPNAPWPTGLHDEISSLDDAKTNVMPTLAFLAIGAPVVVHKKPQFVLLGVCNNSDGIVRGIELDLREDIFLNPTPGYSVVNLRYPPLRVFVYVKTADAAGLHLQGLDRGVVAIAPVEKDFTIL 208
            M+R L S  T++D+ L ++ V+  S   +A   +D  + T         PMMRT C+A  TPLFIA A + ++  ERPG               L DEISSLDDAKTN +PTLA LAIGAPVV+HK+PQFV+LGVCNNSDGI+RGIE+  RE+                    VFVY++TA  AGL L  L RGV ++ PVE++F+I+
Sbjct: 1627 MDRLLLSSPTYNDIRLFDTRVLNGSPGLHAFDCYDGRVNTVLTV-----PMMRTWCKANITPLFIAPAMDSFVGDERPG---------------LRDEISSLDDAKTNDLPTLACLAIGAPVVLHKQPQFVILGVCNNSDGIIRGIEITQREE--------------------VFVYIQTAYDAGLKLPDLCRGVTSVGPVERNFSIV 1794          
BLAST of mRNA_C-linearis_contig78.15365.1 vs. uniprot
Match: A0A6H5L437_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L437_9PHAE)

HSP 1 Score: 136 bits (343), Expect = 3.870e-37
Identity = 71/126 (56.35%), Postives = 91/126 (72.22%), Query Frame = 0
Query:   98 EISSLDDAKTNVMPTLAFLAIGAPVVVHKKPQFVLLGVCNNSDGIVRGIELDLREDIFLNPTPGYSVVNLRYPPLRVFVYVKTADAAGLHLQGLDRGVVAIAPVEKDFTILGI-GRQQDIHLQKAP 222
            E++ LDDAKT  +P    LA+G P+VV+K PQ VLLGVCNNSDGIVR IEL  RE +  N   GY VV+L+YPP+RVFV++++AD AGL L GL RGVVA  PVE++F + G  GR+  I  ++ P
Sbjct:   16 EVNPLDDAKTKGLPRQLCLAVGIPIVVYKSPQHVLLGVCNNSDGIVRAIELYQREQV-QNHNDGYRVVHLKYPPVRVFVHIESADDAGLKLPGLPRGVVAFGPVERNFVLTGNNGRKFTIKRRQLP 140          
BLAST of mRNA_C-linearis_contig78.15365.1 vs. uniprot
Match: A0A6H5JCW5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCW5_9PHAE)

HSP 1 Score: 139 bits (350), Expect = 4.840e-37
Identity = 70/147 (47.62%), Postives = 97/147 (65.99%), Query Frame = 0
Query:   79 GYAKETPAPNAPWPTGLHDEISSLDDAKTNVMPTLAFLAIGAPVVVHKKPQFVLLGVCNNSDGIVRGIELDLREDIFLNPTPGYSVVNLRYPPLRVFVYVKTADAAGLHLQGLDRGVVAIAPVEKDFTILGIGRQQDIHLQKAPAPT 225
            G  + TPA  A W   L DE++++D+A  + +PT+A LA+GA VV+HK PQFVLLGVCNNSDG++  IELD RE+  ++  PG+SVV LRY P+R              L GL RGVVA APVEK F+++G+G+++    ++   PT
Sbjct:   10 GGPRRTPANCAKWSPALRDEVNAIDNASADDLPTVACLAVGAAVVIHKSPQFVLLGVCNNSDGVIDSIELDQREEYHVHSNPGHSVVYLRYTPVR--------------LDGLPRGVVAFAPVEKPFSVVGVGKRKFTIQRRQLLPT 142          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig78.15365.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
A0A6H5KIB1_9PHAE1.590e-10372.97ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. ... [more]
D7G2I1_ECTSI6.810e-8764.81Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G3U9_ECTSI5.900e-8164.81ATP-dependent DNA helicase n=2 Tax=Ectocarpus sili... [more]
A0A6H5KXW4_9PHAE1.210e-8062.73ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. ... [more]
A0A6H5K882_9PHAE5.690e-5246.19ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. ... [more]
A0A6H5JN07_9PHAE2.610e-4246.15ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. ... [more]
A0A6H5L437_9PHAE3.870e-3756.35Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JCW5_9PHAE4.840e-3747.62Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig78contigC-linearis_contig78:521954..523092 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig78.15365.1mRNA_C-linearis_contig78.15365.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig78 521907..524688 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig78.15365.1 ID=prot_C-linearis_contig78.15365.1|Name=mRNA_C-linearis_contig78.15365.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=236bp
MERFLHSICTHDDVELINSCVMGRSSARNASTLFDASIITFRNKYHDGGP
MMRTLCRAKGTPLFIARANNVYIRHERPGYAKETPAPNAPWPTGLHDEIS
SLDDAKTNVMPTLAFLAIGAPVVVHKKPQFVLLGVCNNSDGIVRGIELDL
REDIFLNPTPGYSVVNLRYPPLRVFVYVKTADAAGLHLQGLDRGVVAIAP
VEKDFTILGIGRQQDIHLQKAPAPTDSWLRFFGIP*
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