mRNA_C-linearis_contig78.15365.1 (mRNA) Chordaria linearis ClinC8C monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-linearis_contig78.15365.1
Unique NamemRNA_C-linearis_contig78.15365.1
TypemRNA
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Homology
BLAST of mRNA_C-linearis_contig78.15365.1 vs. uniprot
Match: A0A6H5KIB1_9PHAE (ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIB1_9PHAE)

HSP 1 Score: 420 bits (1080), Expect = 2.780e-124
Identity = 258/568 (45.42%), Postives = 308/568 (54.23%), Query Frame = 3
Query:   48 MERFLHSICTHDDVELINSCVMGRSSARNASTLFDASIITFRNKYHD--GGPMMRTLCRAKGTPLFIARANNVYIRHERPGYAKETPAPNAPWPTGLHDEISSLDDAKTNVMPTLAFLAIGAPVVVHKKPQFVLLGVCNNSDGIVRGIELDLREDIFLNPTPGYSVVNLRYPPLRVFVYVKTADAAGLHLQGLDRGVVAIAPVEKDFTILGIGRQQDIHLQKAPAPTDSWLRFFGIP*PGPDHDKDNPRHSASSW*MHGQRYCLYCFVSRHESERSQLALSCRFGGSKPAAEQAYPCHRQVPRPA*PCDSQALPS*PFHLFAGLRIP*CGRQRRPHPV*KGTSSNHWSARAWCNTESRAPHRQQRQQPLLQYALALGLAAWDGLQLPPTHAGTPAVASFLTALQLLRDSMFNGSALPENIIASFFFSAARQARHDILSGTPIIIIGAGSDMGNVAGVFEAIARYCPLQGSHVWPANVHAQHALVVRTRRDFGLDWRYANNCNIDDHRMLQVTPDQSARLCHATVITMPDGASTTFHDNVFDCLRFPAPSDLSIP*QSLCPYRADAVHE 1745
            MER L+S CT DDV+L+N+CVMG S+ RNA++ FDA I+TFRNK       PMMR LC+A+GTPLF+ARA++VY++H+RPGYA+E PA NAPWPTGL +EI+SLDDAKT  +PTLAFLA+GAPVVVHKKPQFVLLGVCNNSDGI+RGIELD RED  L+PTPGYSVVNLRY PLRVFVY+KTAD AGLHL+GLDRGVVAIAPVEK+FTI GIG+++ I  ++        + +                                     H   +  L L              +P       PA      A    P             RQRR      G  +    A    N+ +               ALALGLAAWDG QLPP+ AGTPA  SF +ALQLLRD MFNGS LP++I+ S F                                                                          NC     R  +VTPDQSARL  ATVIT+P+G S TF DNVF+  R  AP+DL+IP QSL P  AD+VHE
Sbjct: 1959 MERCLYSKCTEDDVKLLNTCVMGASTTRNATSAFDAIIVTFRNKVSTILTAPMMRALCQARGTPLFVARAHDVYVKHQRPGYAEEKPATNAPWPTGLREEINSLDDAKTKDLPTLAFLAVGAPVVVHKKPQFVLLGVCNNSDGIIRGIELDPREDFLLDPTPGYSVVNLRYAPLRVFVYIKTADDAGLHLEGLDRGVVAIAPVEKEFTIEGIGKRKFIFKRRQLPDILGIINYL------------------------------------HRLGKETLKL--------------FPQDASTFTPASASLDAATDEGPTS---------SRRQRRRTTGRHGPGAARRVAHLIANSNNNC---------FFNSALALGLAAWDGQQLPPSSAGTPAAGSFFSALQLLRDCMFNGSTLPDHIVESSF--------------------------------------------------------------------------NC----FRAREVTPDQSARLRGATVITIPNGVSATFQDNVFNFFRTSAPTDLAIPGQSLYPCCADSVHE 2380          
BLAST of mRNA_C-linearis_contig78.15365.1 vs. uniprot
Match: A0A6H5KPV6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPV6_9PHAE)

HSP 1 Score: 314 bits (805), Expect = 1.620e-93
Identity = 183/347 (52.74%), Postives = 207/347 (59.65%), Query Frame = 3
Query: 1158 ALALGLAAWDGLQLPPTHAGTPAVASFLTALQLLRDSMFNGSALPENIIASFFFSAARQARHDILSGTPIIIIGAGSDMGNVAGVFEAIARYCPLQGSHVWPANVHAQHALVVRTRRDFGLDWRYANNCNIDDHRMLQVTPDQSARLCHATVITMPDGASTTFHDNVFDCLRFPAPSDLSIP*QSLCPYRADAVHETLCYWTLLPWTPETAPDSFFFRSGNVSQDLHGNPMSPSMTFSLGASYSLVGVS*HLAFGAGSRNHFASQVRLRGRWHTYDCLDGGVVTSSDSYDSAWNAPSLHLLVYLRTALCVATPAAYSQPSATPGRQSRYHQRAGPTRTSESTSPSGR 2198
            ALALGLAAWDG    P+    P          L  +   N S  P +I+     SAARQARHDIL GTPI   GAG DMGNVAGVFEAIAR CP QGS +WP +V  Q A V RTRRDFGLDWRYANNC I +H   +VTPDQSARL  ATVIT+P+G S TF DNVFD  R  AP+DL+IP QSLCPY AD VH  +C WTLLPWT  TAPD  FFRS  V +                                           L GRWH YDCL GG+VTSSD+YDS W+  S+H+LVYLR+A+CVATP  Y+  SA    +S   + A     SE TSPSGR
Sbjct:  366 ALALGLAAWDG----PSPCPPPVC--------LHNNLQPNASFFPPSILRQ---SAARQARHDILHGTPIT--GAGCDMGNVAGVFEAIARACPRQGSPLWPDSVFDQQARVARTRRDFGLDWRYANNCTIGNHSAREVTPDQSARLRAATVITIPNGVSATFQDNVFDFFRSSAPTDLAIPGQSLCPYCADNVHRNMCDWTLLPWTSNTAPDRIFFRSSCVFRG------------------------------------------LCGRWHKYDCLQGGIVTSSDAYDSGWHVSSVHMLVYLRSAICVATPPPYAPSSA--ATRSNVPRNACRVVQSEPTSPSGR 651          
BLAST of mRNA_C-linearis_contig78.15365.1 vs. uniprot
Match: D7G2I1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2I1_ECTSI)

HSP 1 Score: 294 bits (752), Expect = 5.810e-88
Identity = 197/454 (43.39%), Postives = 243/454 (53.52%), Query Frame = 3
Query:   48 MERFLHSICTHDDVELINSCVMGRSSARNASTLFDASIITFRNKYHD--GGPMMRTLCRAKGTPLFIARANNVYIRHERPGYAKETPAPNAPWPTGLHDEISSLDDAKTNVMPTLAFLAIGAPVVVHKKPQFVLLGVCNNSDGIVRGIELDLREDIFLNPTPGYSVVNLRYPPLRVFVYVKTADAAGLHLQGLDRGVVAIAPVEKDFTILGIGRQQDIHLQKAPAPTDSWL----RFFGIP*PGPDHD-KDNPRHSASSW*MH---------GQRYCLYCFVSR-----------------HESERSQLALSCRFGGS-KPAAEQAYPCHRQVPRPA*PCDSQALPS*PFHLFAGLRIP*CGRQRRPHPV*K-GTSSNHWSARAWCNTESRAPHRQQRQQPLLQYALALGLAAWDGLQLPPTHAGTPAVASFLTALQLLRDSMFNGSALPENII 1304
            MER L S C  DDV+LIN+ VMG S  R A +LFDA +I FRNK +     PMMRT C+AKGT LFIA A++VY+ H+RPG   E P  +APWP GL  EI SLDD KTN +PT A LAIGAPVV+HK PQFVLLGVCNNSDGI+RGIELD RE  + + T GYSVV LRY PLR+FVY+K+ADAAGLHL GL RGV+A+APVE+ FTI+GI +++    ++    T   L    R  G   P    D +  P H+     ++         G    L+    +                 H  + + + L  +  GS  PA           PRP                            ++P  V + G  +    A    N ++               ALAL LAAWDG  LP T AGTPA  SF  ALQLLRDSMF+   L  NI+
Sbjct:   16 MERCLRSECISDDVDLINNHVMGTS--RKADSLFDARVIAFRNKVNTVLTVPMMRTWCKAKGTTLFIAAAHDVYVGHQRPGATAEVPPTDAPWPAGLRREIKSLDDGKTNDLPTSACLAIGAPVVLHKSPQFVLLGVCNNSDGIIRGIELDPREG-YASSTAGYSVVTLRYAPLRIFVYIKSADAAGLHLDGLQRGVIAVAPVERKFTIVGINKRKFTFKRRQIPLTAGCLSSVYRSQGQTMPKIILDIRRPPGHAVDCAAVYVALSRATGLGDLNLLFPVTLQDLNQPQNPDIVAIVNYLHRLDETTMVLFLKDPGSFTPAYATLDGIEEAGPRPP--------------------------HKQPKRVGRHGPGATRRVAHLIPNEDNNC---------FFNSALALALAAWDGQPLPDTTAGTPAAGSFFAALQLLRDSMFDECDLSPNIV 431          
BLAST of mRNA_C-linearis_contig78.15365.1 vs. uniprot
Match: A0A6H5K6P6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6P6_9PHAE)

HSP 1 Score: 279 bits (714), Expect = 8.410e-84
Identity = 150/267 (56.18%), Postives = 171/267 (64.04%), Query Frame = 3
Query: 1158 ALALGLAAWDGLQLPPTHAGTPAVASFLTALQLLRDSMFNGSALPENIIASFFFSAARQARHDILSGTPIIIIGAGSDMGNVAGVFEAIARYCPLQGSHVWPANVHAQHALVVRTRRDFGLDWRYANNCNIDDHRMLQVTPDQSARLCHATVITMPDGASTTFHDNVFDCLRFPAPSDLSIP*QSLCPYRADAVHETLCYWTLLPWTPETAPDSFFFRSGNVSQDLHGNPMSPSMTFSLGASYSLVGVS*HLAFGAGS-RNHFASQV 1955
            ALALGLAAWDG QLPP+ AGTPA  SF +ALQLLRDSMF+GSALP++I+                                               GS +WP +V  Q A V RTRRDFGLDWRYANNC I +H   +VTPDQSARL  ATVIT+P+G S TF DNVFD  R  AP+DL+IP QSLCPY AD VH  +C WTLLPWT  TAPD  FFRS  V + L G PM+PSMTF++GA+YSLVGVS  L  G G+ RNHF SQV
Sbjct:  131 ALALGLAAWDGQQLPPSSAGTPAAGSFFSALQLLRDSMFDGSALPDHIV-----------------------------------------------GSPLWPDSVFDQQARVARTRRDFGLDWRYANNCTIGNHSAREVTPDQSARLRAATVITIPNGVSATFQDNVFDFFRSSAPTDLAIPGQSLCPYCADNVHRNMCDWTLLPWTSNTAPDRIFFRSSCVFRGLDGRPMAPSMTFTMGAAYSLVGVSYFLPLGGGTNRNHFVSQV 350          
BLAST of mRNA_C-linearis_contig78.15365.1 vs. uniprot
Match: D7G3U9_ECTSI (ATP-dependent DNA helicase n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3U9_ECTSI)

HSP 1 Score: 294 bits (752), Expect = 4.310e-81
Identity = 197/454 (43.39%), Postives = 243/454 (53.52%), Query Frame = 3
Query:   48 MERFLHSICTHDDVELINSCVMGRSSARNASTLFDASIITFRNKYHD--GGPMMRTLCRAKGTPLFIARANNVYIRHERPGYAKETPAPNAPWPTGLHDEISSLDDAKTNVMPTLAFLAIGAPVVVHKKPQFVLLGVCNNSDGIVRGIELDLREDIFLNPTPGYSVVNLRYPPLRVFVYVKTADAAGLHLQGLDRGVVAIAPVEKDFTILGIGRQQDIHLQKAPAPTDSWL----RFFGIP*PGPDHD-KDNPRHSASSW*MH---------GQRYCLYCFVSR-----------------HESERSQLALSCRFGGS-KPAAEQAYPCHRQVPRPA*PCDSQALPS*PFHLFAGLRIP*CGRQRRPHPV*K-GTSSNHWSARAWCNTESRAPHRQQRQQPLLQYALALGLAAWDGLQLPPTHAGTPAVASFLTALQLLRDSMFNGSALPENII 1304
            MER L S C  DDV+LIN+ VMG S  R A +LFDA +I FRNK +     PMMRT C+AKGT LFIA A++VY+ H+RPG   E P  +APWP GL  EI SLDD KTN +PT A LAIGAPVV+HK PQFVLLGVCNNSDGI+RGIELD RE  + + T GYSVV LRY PLR+FVY+K+ADAAGLHL GL RGV+A+APVE+ FTI+GI +++    ++    T   L    R  G   P    D +  P H+     ++         G    L+    +                 H  + + + L  +  GS  PA           PRP                            ++P  V + G  +    A    N ++               ALAL LAAWDG  LP T AGTPA  SF  ALQLLRDSMF+   L  NI+
Sbjct: 1723 MERCLRSECISDDVDLINNHVMGTS--RKADSLFDARVIAFRNKVNTVLTVPMMRTWCKAKGTTLFIAAAHDVYVGHQRPGATAEVPPTDAPWPAGLRREIKSLDDGKTNDLPTSACLAIGAPVVLHKSPQFVLLGVCNNSDGIIRGIELDPREG-YASSTAGYSVVTLRYAPLRIFVYIKSADAAGLHLDGLQRGVIAVAPVERKFTIVGINKRKFTFKRRQIPLTAGCLSSVYRSQGQTMPKIILDIRRPPGHAVDCAAVYVALSRATGLGDLNLLFPVTLQDLNQPQNPDIVAIVNYLHRLDETTMVLFLKDPGSFTPAYATLDGIEEAGPRPP--------------------------HKQPKRVGRHGPGATRRVAHLIPNEDNNC---------FFNSALALALAAWDGQPLPDTTAGTPAAGSFFAALQLLRDSMFDECDLSPNIV 2138          
BLAST of mRNA_C-linearis_contig78.15365.1 vs. uniprot
Match: A0A6H5KXW4_9PHAE (ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXW4_9PHAE)

HSP 1 Score: 267 bits (683), Expect = 8.770e-75
Identity = 156/289 (53.98%), Postives = 184/289 (63.67%), Query Frame = 3
Query:   48 MERFLHSICTHDDVELINSCVMGRSSARNASTLFDASIITFRNKYHDGGPMMRTLCRAKGTPLFIARANNVYIRHERPGYAKETPAPNAPWPTGLHDEISSLDDAKTNVMPTLAFLAIGAPVVVHKKPQFVLLGVCNNSDGIVRGIELDLREDIFLNPTPGYSVVNLRYPPLRVFVYVKTADAAGLHLQGLDRGVVAIAPVEKDFTILGIGRQQDIHLQKA-PAPT---DSWLRFFGIP*PGPDHDKDNPRHSASSW*MHGQRYCLYCFVSRHESERSQLALSCRFGGS 902
            MER L+S CT DDV L+N+CVMG S+ RNA++ FDASIITFRNK +     + T   A     F+              +  + PA NAPWPTGL +EI+SLDDA T  +PTLAFLA+GAPVVVHK+PQFVLLGVCNNSDGI+RGIELD  ED  L+PTPGYSVVNLRY PL+VFVY+KTAD AGLHL+GLDRGVVAIAPVEK+ TI GIG+ + I  ++  P P     S  R  G   P    D   P  +A      G      CF       R+ LAL   F  S
Sbjct:  511 MERCLYSKCTEDDVRLLNTCVMGASTTRNATSAFDASIITFRNKEY----ALATRTNAPSPIPFLHL------------FFPQKPATNAPWPTGLREEINSLDDANTKDLPTLAFLAVGAPVVVHKRPQFVLLGVCNNSDGIIRGIELDPLEDFLLDPTPGYSVVNLRYAPLQVFVYIKTADDAGLHLEGLDRGVVAIAPVEKECTIEGIGKGKFIFKRRQLPLPAGCVSSVFRSQGQTMPKIILDIHPPPGTAMKG---GSTSTFICFRFVSRLPRASLALPYAFFSS 780          
BLAST of mRNA_C-linearis_contig78.15365.1 vs. uniprot
Match: A0A6H5K882_9PHAE (ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K882_9PHAE)

HSP 1 Score: 197 bits (501), Expect = 7.920e-49
Identity = 143/426 (33.57%), Postives = 206/426 (48.36%), Query Frame = 3
Query:   54 RFLHSICTHDDVELINSCVMGRSSARNASTLFDASIITFRNKYHDG--GPMMRTLCRAKGTPLFIARANNVYIRHERPGYAKETPAPNAPWPTGLHDEISSLDDAKTNVMPTLAFLAIGAPVVVHKKPQFVLLGVCNNSDGIVRGIELDLREDIFLNPTPGYSVVNLRYPPLRVFVYVKTADAAGLHLQGLDRGVVAIAPVEKDFTILGI-GRQQDIHLQKAPAPTDSWLRFFGI-----P*PGPDHDKDNPRHSASSW*MHGQRYCLYCFVSRHESERSQLALSCRFGGSKPAAEQAYPCHRQVPRPA*PCDSQALPS*PFHLFAGLRIP*CGRQRRPHPV*KGTSSNHWSARAWCNTESRAPHRQQRQQP--LLQYALALGLAAWDGLQLPPTHAGTPAVASFLTALQLLRDSMFNGSALPENI 1301
            RFLHS  T+ DV   N+ V+  +   +A+  +D  +IT RNK       P MRT C+++GT LFI+ A + ++  E  G  KETP   A WP  L +E++SLDD KT  +P    LA+G P+VVHK PQ VLLGVC+N DGIVR IELD RE I  N   GY VV+L++ P+RVFV++++ D +GL L G  RGVVA  P+E++  + G  GR   I  ++ P  T   L    +       PGP  D  +   + S        Y L+       S      +       +  A+         P    P  + +LP+      +G                 G   + W   A    + +  H             A+AL LA +DG   P     TPA  +F  A++L++D+M +G+ +PE+I
Sbjct: 1210 RFLHSRSTYSDVIKFNTRVLNGTPGLSAADCYDGKVITLRNKVTTALTMPTMRTWCQSRGTTLFISSATDEFVGDEGGGRPKETPQAGAAWPPCLRNEVNSLDDTKTKDLPRQLCLAVGVPIVVHKSPQHVLLGVCSNRDGIVRAIELDQREQI-QNHDGGYRVVHLKHLPVRVFVHIESMDDSGLKLPGFPRGVVAFGPIERNVVLTGKNGRNFTIKRRQLPL-TSGCLSSVRVILDLRKPPGPRVDPASLYVARSRAKSLNDTYLLFPVTLNDLSRPRDADVVALIDCLRRLAKDTLNAFTSDPSTFIP-SATSLPT-DSDYDSGEN--------------DGGRGSGWLGGASRRRQLQPAHLMPNSANNCFFNSAIALCLAVFDGHTPPNFSDCTPAATAFCPAIRLVKDNMLSGAPMPEHI 1617          
BLAST of mRNA_C-linearis_contig78.15365.1 vs. uniprot
Match: A0A6H5KDI5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDI5_9PHAE)

HSP 1 Score: 171 bits (433), Expect = 2.220e-45
Identity = 90/154 (58.44%), Postives = 108/154 (70.13%), Query Frame = 3
Query: 1752 CYWTLLPWTPETAPDSFFFRSGNVSQDLHGNPMSPSMTFSLGASYSLVGVS*HLAFGAG-SRNHFASQVRLRGRWHTYDCLDGGVVTSSDSYDSAWNAPSLHLLVYLRTALCVATPAAYSQPSATP----GRQSRYHQRAGPTRTSESTSPSGR 2198
            C WTLLPWTP TAPD  F RS  V + LHG PMSPSMTF++G +YSLVG+S  LA G G +RNHF SQV +RGRWH  DCL GG+VTSSD++ S W+  S+H+LVYLR+++CVATP  Y+  SAT     GR +   Q       SE TSPSGR
Sbjct:   62 CDWTLLPWTPNTAPDRIFVRSSCVFRGLHGRPMSPSMTFTMGVTYSLVGISCFLALGGGPNRNHFVSQVWIRGRWHKDDCLQGGIVTSSDAFGSGWHVSSVHMLVYLRSSICVATPPPYAPSSATTRSNVGRNACRVQ-------SEPTSPSGR 208          
BLAST of mRNA_C-linearis_contig78.15365.1 vs. uniprot
Match: A0A6H5JN07_9PHAE (ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN07_9PHAE)

HSP 1 Score: 171 bits (434), Expect = 2.300e-40
Identity = 150/467 (32.12%), Postives = 207/467 (44.33%), Query Frame = 3
Query:   48 MERFLHSICTHDDVELINSCVMGRSSARNASTLFDASIITFRNKYHDGGPMMRTLCRAKGTPLFIARANNVYIRHERPGYAKETPAPNAPWPTGLHDEISSLDDAKTNVMPTLAFLAIGAPVVVHKKPQFVLLGVCNNSDGIVRGIELDLREDIFLNPTPGYSVVNLRYPPLRVFVYVKTADAAGLHLQGLDRGVVAIAPVEKDFTILGIGRQQDIHLQKAPAP-TDSWLRFFGIP*PGPDHDKDNPRHSASSW*MHGQRYCLYCFVSRHESERSQLALSCRFGGSKPAAEQAYPCHRQVPRPA*PCDSQALPS*PFHLFAGLRIP*CGRQRRP--------------------HP-------V*KGTSSNHWSARAWCNTES---RAPHRQQRQQP-----------------LLQYALALGLAAWDGLQLPPTHAGTPAVASFLTALQLLRDSMFNGSALPENII 1304
            M+R L S  T++D+ L ++ V+  S   +A   +D  + T         PMMRT C+A  TPLFIA A + ++  ERPG               L DEISSLDDAKTN +PTLA LAIGAPVV+HK+PQFV+LGVCNNSDGI+RGIE+  RE+                    VFVY++TA  AGL L  L RGV ++ PVE++F+I+    ++     +   P T   L   G              + ASS        CLY  +  H     ++ L  +    KP      P    +        S+A      +L   + +    R R                      HP            SS+  +     NT +   R   R  R  P                  L  A+AL LAA+DGL  P     TPA A+F  A++L++D+MFNG +L ++ +
Sbjct: 1627 MDRLLLSSPTYNDIRLFDTRVLNGSPGLHAFDCYDGRVNTVLTV-----PMMRTWCKANITPLFIAPAMDSFVGDERPG---------------LRDEISSLDDAKTNDLPTLACLAIGAPVVLHKQPQFVILGVCNNSDGIIRGIEITQREE--------------------VFVYIQTAYDAGLKLPDLCRGVTSVGPVERNFSIVITKTKRKFTFSRKQVPLTAGCLSALGSD------------YIASS--------CLYHPILSHCVSLRRIILDLQ----KPPQPLVDPASSYL------ALSRATYLEDLYLLFPVTLEDLSRPRNKDVVALIEFLHRLEETTSLLSHPDRSTFTLTSASLSSDGDAIDGEDNTSTGRTRGGSRPGRHLPASTPSIARLIANKNNNYFLNSAMALTLAAFDGLSPPDGRDCTPAGAAFFPAIKLIQDTMFNGESLQQDTL 2023          
BLAST of mRNA_C-linearis_contig78.15365.1 vs. uniprot
Match: A0A6H5L437_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L437_9PHAE)

HSP 1 Score: 136 bits (343), Expect = 9.090e-34
Identity = 71/126 (56.35%), Postives = 91/126 (72.22%), Query Frame = 3
Query:  339 EISSLDDAKTNVMPTLAFLAIGAPVVVHKKPQFVLLGVCNNSDGIVRGIELDLREDIFLNPTPGYSVVNLRYPPLRVFVYVKTADAAGLHLQGLDRGVVAIAPVEKDFTILGI-GRQQDIHLQKAP 713
            E++ LDDAKT  +P    LA+G P+VV+K PQ VLLGVCNNSDGIVR IEL  RE +  N   GY VV+L+YPP+RVFV++++AD AGL L GL RGVVA  PVE++F + G  GR+  I  ++ P
Sbjct:   16 EVNPLDDAKTKGLPRQLCLAVGIPIVVYKSPQHVLLGVCNNSDGIVRAIELYQREQV-QNHNDGYRVVHLKYPPVRVFVHIESADDAGLKLPGLPRGVVAFGPVERNFVLTGNNGRKFTIKRRQLP 140          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig78.15365.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 15
Match NameE-valueIdentityDescription
A0A6H5KIB1_9PHAE2.780e-12445.42ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. ... [more]
A0A6H5KPV6_9PHAE1.620e-9352.74Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G2I1_ECTSI5.810e-8843.39Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K6P6_9PHAE8.410e-8456.18Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G3U9_ECTSI4.310e-8143.39ATP-dependent DNA helicase n=2 Tax=Ectocarpus sili... [more]
A0A6H5KXW4_9PHAE8.770e-7553.98ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. ... [more]
A0A6H5K882_9PHAE7.920e-4933.57ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. ... [more]
A0A6H5KDI5_9PHAE2.220e-4558.44Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JN07_9PHAE2.300e-4032.12ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. ... [more]
A0A6H5L437_9PHAE9.090e-3456.35Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig78contigC-linearis_contig78:521907..524688 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score276.6
Seed ortholog evalue1.1e-71
Seed eggNOG ortholog2880.D7G3U9
KEGG koko:K15255,ko:K20647
Hectar predicted targeting categoryother localisation
EggNOG free text desc.G-quadruplex DNA unwinding
EggNOG OGsCOG0507@1,KOG0987@2759
EC3.6.4.12
COG Functional cat.L
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko03029,ko03032,ko04131
Exons4
Model size2252
Cds size708
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig78.15365.1prot_C-linearis_contig78.15365.1Chordaria linearis ClinC8C monoicouspolypeptideC-linearis_contig78 521954..523092 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930483.8877323-UTR-C-linearis_contig78:521906..5219531622930483.8877323-UTR-C-linearis_contig78:521906..521953Chordaria linearis ClinC8C monoicousUTRC-linearis_contig78 521907..521953 +
1690881093.3416302-UTR-C-linearis_contig78:521906..5219531690881093.3416302-UTR-C-linearis_contig78:521906..521953Chordaria linearis ClinC8C monoicousUTRC-linearis_contig78 521907..521953 +
1622930483.969413-UTR-C-linearis_contig78:523092..5236561622930483.969413-UTR-C-linearis_contig78:523092..523656Chordaria linearis ClinC8C monoicousUTRC-linearis_contig78 523093..523656 +
1690881093.3824322-UTR-C-linearis_contig78:523092..5236561690881093.3824322-UTR-C-linearis_contig78:523092..523656Chordaria linearis ClinC8C monoicousUTRC-linearis_contig78 523093..523656 +
1622930483.9858813-UTR-C-linearis_contig78:523755..5246881622930483.9858813-UTR-C-linearis_contig78:523755..524688Chordaria linearis ClinC8C monoicousUTRC-linearis_contig78 523756..524688 +
1690881093.3956213-UTR-C-linearis_contig78:523755..5246881690881093.3956213-UTR-C-linearis_contig78:523755..524688Chordaria linearis ClinC8C monoicousUTRC-linearis_contig78 523756..524688 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930483.906921-CDS-C-linearis_contig78:521953..5220851622930483.906921-CDS-C-linearis_contig78:521953..522085Chordaria linearis ClinC8C monoicousCDSC-linearis_contig78 521954..522085 +
1690881093.3534908-CDS-C-linearis_contig78:521953..5220851690881093.3534908-CDS-C-linearis_contig78:521953..522085Chordaria linearis ClinC8C monoicousCDSC-linearis_contig78 521954..522085 +
1622930483.9233143-CDS-C-linearis_contig78:522251..5223681622930483.9233143-CDS-C-linearis_contig78:522251..522368Chordaria linearis ClinC8C monoicousCDSC-linearis_contig78 522252..522368 +
1690881093.3625252-CDS-C-linearis_contig78:522251..5223681690881093.3625252-CDS-C-linearis_contig78:522251..522368Chordaria linearis ClinC8C monoicousCDSC-linearis_contig78 522252..522368 +
1622930483.9489284-CDS-C-linearis_contig78:522633..5230921622930483.9489284-CDS-C-linearis_contig78:522633..523092Chordaria linearis ClinC8C monoicousCDSC-linearis_contig78 522634..523092 +
1690881093.3717902-CDS-C-linearis_contig78:522633..5230921690881093.3717902-CDS-C-linearis_contig78:522633..523092Chordaria linearis ClinC8C monoicousCDSC-linearis_contig78 522634..523092 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-linearis_contig78.15365.1

>prot_C-linearis_contig78.15365.1 ID=prot_C-linearis_contig78.15365.1|Name=mRNA_C-linearis_contig78.15365.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=236bp
MERFLHSICTHDDVELINSCVMGRSSARNASTLFDASIITFRNKYHDGGP
MMRTLCRAKGTPLFIARANNVYIRHERPGYAKETPAPNAPWPTGLHDEIS
SLDDAKTNVMPTLAFLAIGAPVVVHKKPQFVLLGVCNNSDGIVRGIELDL
REDIFLNPTPGYSVVNLRYPPLRVFVYVKTADAAGLHLQGLDRGVVAIAP
VEKDFTILGIGRQQDIHLQKAPAPTDSWLRFFGIP*
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mRNA from alignment at C-linearis_contig78:521907..524688+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-linearis_contig78.15365.1 ID=mRNA_C-linearis_contig78.15365.1|Name=mRNA_C-linearis_contig78.15365.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=2782bp|location=Sequence derived from alignment at C-linearis_contig78:521907..524688+ (Chordaria linearis ClinC8C monoicous)
ATGTTGGATGAATCCAACCGATTCTCGCCTACCTACGCACCGATCATATG GAACGTTTTCTGCACTCCATCTGCACCCACGACGACGTCGAACTCATCAA CAGCTGCGTCATGGGACGCTCCTCGGCGCGCAACGCCTCCACCCTTTTCG ACGCCAGCATCATCACATTCCGAAACAAGGTATTTCCGTTCCTCCTGTCT ATTTCTGCTCCTCCGTATTTCTGCTCTACATACATAAGTAATATTCCTCA CTTATCCCCCTCGCATGCACCGCCCTCCTCTACTTTCAACTTCATTTTCT ACGTCTTTTTTCCAACAATTCCCCCTACTTTCCTTCCTAGGTAAGTACCA TGACGGGGGACCCATGATGCGTACTCTGTGCCGAGCGAAAGGAACTCCGC TTTTCATCGCCCGCGCGAACAACGTTTACATCCGGCACGAGCGCCCCGGT TATGCCAAAGAGGTATGTTATTCCGTCTTTGTCAACCCACACTACTGGTT TTATGACTACTGGTTTTATAACAGTACGAGTACCTCTGTGTTGCTGAGTG GATTGCTATCATGTTTTGTTTCTATTTTGCCGCTTCTTCCGCCACCACAT GAAGACACACCAACGATCGGGCCCCAAACGTCGATCTCGACCCACACTGC GAGTTTTGCAACCTTGCGAGTATCTCTGTGTAGCTTAGACTAGTTCTTTA CCTCCATGTGCGCTTCATAATCCGCAGACGCCAGCCCCTAACGCGCCTTG GCCTACTGGTTTGCATGACGAGATTAGCTCCCTCGACGACGCCAAGACCA ACGTCATGCCAACGCTAGCGTTCCTTGCCATCGGAGCTCCGGTCGTCGTT CACAAGAAGCCCCAGTTTGTTCTATTGGGTGTTTGCAACAACTCCGACGG CATCGTCCGCGGCATCGAACTTGACCTGCGGGAGGACATCTTCCTCAACC CTACGCCTGGCTACTCCGTCGTCAACCTGCGGTACCCGCCGCTTCGGGTC TTCGTCTACGTCAAGACAGCCGACGCCGCTGGCCTGCACTTGCAAGGCTT GGACCGGGGTGTTGTAGCCATCGCTCCCGTCGAGAAGGATTTCACCATCC TCGGCATCGGTCGGCAACAGGATATTCACCTTCAAAAGGCGCCAGCTCCC ACTGACAGCTGGCTGCGTTTCTTCGGTATTCCGTAGCCAGGGCCAGACCA CGACAAAGATAACCCTCGACATTCGGCCTCCTCCTGGTAAATGCATGGAC AACGCTACTGTCTATATTGCTTTGTCTCGCGCCACGAGTCTGAACGCTCT CAACTTGCTCTTTCCTGTCGCTTTGGAGGATCTAAACCAGCCGCCGAACA AGCATATCCTTGCCATCGTCAAGTACCTCGACCGGCTTGACCGTGCGACT CTCAAGCTCTTCCTTCATGACCCTTCCACCTTTTTGCCGGCCTCCGCATC CCTTGATGCGGTCGCCAACGAAGGCCCCACCCTGTCTAGAAGGGGACGTC TTCGAACCACTGGTCGGCACGGGCCTGGTGCAACACGGAGAGTCGCGCAC CTCATCGCCAACAGCGACAACAACCGCTTCTTCAATACGCCTTAGCTTTG GGCCTGGCGGCGTGGGACGGGCTGCAACTGCCACCTACACATGCTGGCAC TCCCGCTGTGGCATCGTTTCTTACGGCTCTCCAGCTACTGAGGGATTCCA TGTTCAACGGTTCCGCCTTGCCGGAGAACATCATCGCAAGTTTCTTTTTC GTTTCTCCTCGTCACTAGACTATTCTACGTAGCATTTCTTTCTGTCGTGA CCTTCTGCCTAATCCTCGCTCTTCTTACCTTCGCTCGCCACTTCCCCAGT CTGCTGCTCGACAGGCTCGTCACGACATCCTGTCCGGTACCCCTATTATT ATTATCGGAGCCGGATCTGACATGGGTAACGTCGCCGGCGTGTTCGAGGC CATTGCGAGATATTGTCCGCTTCAAGGCTCACATGTATGGCCTGCCAACG TCCACGCCCAGCATGCTCTTGTTGTGCGCACTCGCCGAGACTTCGGCCTT GATTGGAGGTACGCCAACAACTGCAACATCGACGACCACCGCATGCTCCA GGTCACACCGGATCAGTCTGCCAGGCTATGCCACGCCACCGTCATCACCA TGCCCGATGGTGCATCGACAACCTTCCACGACAACGTCTTCGACTGCTTG CGCTTCCCCGCCCCTTCCGACCTCTCCATCCCCTAACAATCTTTGTGCCC TTACCGTGCGGATGCCGTCCACGAGACCTTGTGCTACTGGACCCTTCTTC CGTGGACGCCGGAAACGGCACCTGACAGTTTTTTTTTCAGATCTGGGAAC GTCTCCCAAGATCTTCATGGCAACCCCATGTCTCCGTCCATGACCTTCAG CTTGGGGGCATCATATTCTTTGGTCGGAGTTTCCTAGCATCTGGCGTTTG GCGCCGGCTCTCGGAACCATTTTGCATCCCAAGTGCGACTTCGGGGAAGA TGGCATACCTACGACTGTCTGGACGGCGGGGTCGTCACTTCTTCCGACAG CTACGACTCTGCTTGGAACGCTCCGTCTCTACACTTGCTGGTGTATTTAC GGACGGCCTTGTGCGTGGCTACGCCGGCTGCCTACAGCCAACCTTCAGCT ACGCCCGGACGTCAGAGTCGCTACCATCAGCGTGCAGGGCCGACTAGAAC TTCTGAGAGCACCTCGCCTTCCGGACGCAGTAGTAGTACTTCTGCTGTAC ATATCGAGCCTGTCAGCCCATCTGGCCGCACG
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Coding sequence (CDS) from alignment at C-linearis_contig78:521907..524688+

>mRNA_C-linearis_contig78.15365.1 ID=mRNA_C-linearis_contig78.15365.1|Name=mRNA_C-linearis_contig78.15365.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=1416bp|location=Sequence derived from alignment at C-linearis_contig78:521907..524688+ (Chordaria linearis ClinC8C monoicous)
ATGGAACGTTTTCTGCACTCCATCTGCACCCACGACGACGTCGAACTCAT
CAACAGCTGCGTCATGGGACGCTCCTCGGCGCGCAACGCCTCCACCCTTT
TCGACGCCAGCATCATCACATTCCGAAACAAGATGGAACGTTTTCTGCAC
TCCATCTGCACCCACGACGACGTCGAACTCATCAACAGCTGCGTCATGGG
ACGCTCCTCGGCGCGCAACGCCTCCACCCTTTTCGACGCCAGCATCATCA
CATTCCGAAACAAGTACCATGACGGGGGACCCATGATGCGTACTCTGTGC
CGAGCGAAAGGAACTCCGCTTTTCATCGCCCGCGCGAACAACGTTTACAT
CCGGCACGAGCGCCCCGGTTATGCCAAAGAGTACCATGACGGGGGACCCA
TGATGCGTACTCTGTGCCGAGCGAAAGGAACTCCGCTTTTCATCGCCCGC
GCGAACAACGTTTACATCCGGCACGAGCGCCCCGGTTATGCCAAAGAGAC
GCCAGCCCCTAACGCGCCTTGGCCTACTGGTTTGCATGACGAGATTAGCT
CCCTCGACGACGCCAAGACCAACGTCATGCCAACGCTAGCGTTCCTTGCC
ATCGGAGCTCCGGTCGTCGTTCACAAGAAGCCCCAGTTTGTTCTATTGGG
TGTTTGCAACAACTCCGACGGCATCGTCCGCGGCATCGAACTTGACCTGC
GGGAGGACATCTTCCTCAACCCTACGCCTGGCTACTCCGTCGTCAACCTG
CGGTACCCGCCGCTTCGGGTCTTCGTCTACGTCAAGACAGCCGACGCCGC
TGGCCTGCACTTGCAAGGCTTGGACCGGGGTGTTGTAGCCATCGCTCCCG
TCGAGAAGGATTTCACCATCCTCGGCATCGGTCGGCAACAGGATATTCAC
CTTCAAAAGGCGCCAGCTCCCACTGACAGCTGGCTGCGTTTCTTCGGTAT
TCCGTAGACGCCAGCCCCTAACGCGCCTTGGCCTACTGGTTTGCATGACG
AGATTAGCTCCCTCGACGACGCCAAGACCAACGTCATGCCAACGCTAGCG
TTCCTTGCCATCGGAGCTCCGGTCGTCGTTCACAAGAAGCCCCAGTTTGT
TCTATTGGGTGTTTGCAACAACTCCGACGGCATCGTCCGCGGCATCGAAC
TTGACCTGCGGGAGGACATCTTCCTCAACCCTACGCCTGGCTACTCCGTC
GTCAACCTGCGGTACCCGCCGCTTCGGGTCTTCGTCTACGTCAAGACAGC
CGACGCCGCTGGCCTGCACTTGCAAGGCTTGGACCGGGGTGTTGTAGCCA
TCGCTCCCGTCGAGAAGGATTTCACCATCCTCGGCATCGGTCGGCAACAG
GATATTCACCTTCAAAAGGCGCCAGCTCCCACTGACAGCTGGCTGCGTTT
CTTCGGTATTCCGTAG
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