mRNA_C-linearis_contig7.14607.1 (mRNA) Chordaria linearis ClinC8C monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-linearis_contig7.14607.1
Unique NamemRNA_C-linearis_contig7.14607.1
TypemRNA
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Homology
BLAST of mRNA_C-linearis_contig7.14607.1 vs. uniprot
Match: D7G211_ECTSI (RING-type E3 ubiquitin transferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G211_ECTSI)

HSP 1 Score: 165 bits (418), Expect = 5.190e-41
Identity = 164/491 (33.40%), Postives = 201/491 (40.94%), Query Frame = 1
Query:    1 QGSCKNGDACRFTHGTSHKREFPPQGGEAAGRVSAPAAEEEGPATAPTTKNKKKPCRFFVKGKAAACTRGESCPFLHYI-------------GDESGSSI-SANGKNKVKDGYKAGTPDTDADRCTVK--SKPKGTPKVKVKVKPSTKAVVDGRRGDNGAPIVT--ATVTAAKRSAPGEAAAXXXXXXXXXXXIKPRLLGSSXXXSLSLSSKARVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQRANTKPCAFFLRGRCRYGDCCRFSHDIARESE----------------GEEEERG--------------EDTIATKEAAALDEAERIQSRKAECGVCLEVVRRKETVKGRTFGILIGCRHVYCLSCITDWRNKSKSHECPECRVPSPLVVSSKTLVTDPERKARLVSNFQKSLSG 1329
            +GSC+ G +CRFTHGTS  RE    G  AAG    P    +   TA T+   K+PCRFF KGK   C RG SC FLH               GDE+G    S++GK     G   G  D      T K  ++P  +P  K    P+     D R    G  +    A  +++KRS                        G      L  S    V                                                           XXXXXXXXX                                ++A  + C FF RGRCRYGD CRFSHD   E+                 G +E+RG              ED +A +E AALDEAE+IQSR AECG+CLE VR+   VK R FGIL+ CRHVYCL CI +WR+KS +H CPEC + S LV+ SKTLVTDP+RK RL    ++S  G
Sbjct:   19 KGSCRYGASCRFTHGTSDSRELRADG--AAGETQTP---RQARPTASTSS--KEPCRFFAKGK---CVRGASCRFLHSATGSDDSSPAAAGDGDETGRRPRSSSGKATPNGGCAEGDEDRGRTVTTAKRPARPCPSPGRKPSSAPAAAVAGDSRVRPEGVCVKRGYAGCSSSKRSGGSSG-------------------GDEVARRLQRSWTDIVTKDVPMDAGGGTASPASTAITESGSSSEENDNDAEEPIAPARRKLAANAADKRDRNTARXXXXXXXXXTSAPAPGAAAPLDQRRTQPAGGSDSGESDGKGKQAK-QACVFFARGRCRYGDRCRFSHDAVEETPAAGGGARXXXXXXXXAGRKEKRGVASEPSSHESEGFGEDEVAARE-AALDEAEKIQSRSAECGICLEKVRKLGKVKDRVFGILVSCRHVYCLGCIREWRDKSDNHACPECGLTSSLVIPSKTLVTDPDRKKRLALELRQSPRG 478          
BLAST of mRNA_C-linearis_contig7.14607.1 vs. uniprot
Match: A0A6H5L7F8_9PHAE (RING-type E3 ubiquitin transferase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7F8_9PHAE)

HSP 1 Score: 152 bits (384), Expect = 2.300e-36
Identity = 84/172 (48.84%), Postives = 101/172 (58.72%), Query Frame = 1
Query:  913 CAFFLRGRCRYGDCCRFSHDIARE-------------------SEGEEEERG--------------EDTIATKEAAALDEAERIQSRKAECGVCLEVVRRKETVKGRTFGILIGCRHVYCLSCITDWRNKSKSHECPECRVPSPLVVSSKTLVTDPERKARLVSNFQKSLSG 1329
            C FF RGRCRYGD CRFSHD   E                   S G +E+RG              ED +A +E AALDEAERIQSR AECG+CL  VR+   VK R FGIL+ C+H+YCL CI +WR+KS +H CPEC + S L + SKT VTD +RK RL    ++S  G
Sbjct:  307 CVFFARGRCRYGDRCRFSHDAVEETPAAGAGGERGSHGGRGGGSVGRKEKRGVASEPSSHASEGFGEDEVAARE-AALDEAERIQSRSAECGICLGKVRKLGKVKDRVFGILVSCKHIYCLGCIQEWRDKSNNHACPECGLSSSLALPSKTFVTDLDRKKRLALELRQSPRG 477          
BLAST of mRNA_C-linearis_contig7.14607.1 vs. uniprot
Match: W2R264_PHYPN (RING-type E3 ubiquitin transferase n=38 Tax=Phytophthora TaxID=4783 RepID=W2R264_PHYPN)

HSP 1 Score: 109 bits (272), Expect = 6.610e-22
Identity = 59/149 (39.60%), Postives = 84/149 (56.38%), Query Frame = 1
Query:  898 ANTKPCAFFLRGRCRYGDCCRFSHDIARESEGEEEERGEDTIATKEAAALDEAERIQSRKAECGVCLEVVRRKETVKGRTFGILIGCRHVYCLSCITDWRN-----KSKSHECPECRVPSPLVVSSKTLVTDPERKARLVSNFQKSLSG 1329
            A  K C FFL+G CRYGD C +SH +    E EEE             A+ E  R+ S+  ECG+C E++ +K    G  FG+L GC H +CL+C+ +WR+     K    +CP CRV +  ++ S  +VT PERK  L+  ++K+LSG
Sbjct:  228 APPKICTFFLQGLCRYGDTCFYSHSLPERVESEEE-----------MLAMGEEIRL-SQDLECGICYEIILKK----GERFGLLSGCNHSFCLTCLRNWRSSEDQPKQTVRQCPVCRVETKFIIPSSRMVTRPERKKVLIDVYRKNLSG 360          
BLAST of mRNA_C-linearis_contig7.14607.1 vs. uniprot
Match: A0A329S6E1_9STRA (RING-type E3 ubiquitin transferase n=2 Tax=Phytophthora TaxID=4783 RepID=A0A329S6E1_9STRA)

HSP 1 Score: 107 bits (268), Expect = 2.190e-21
Identity = 59/149 (39.60%), Postives = 83/149 (55.70%), Query Frame = 1
Query:  898 ANTKPCAFFLRGRCRYGDCCRFSHDIARESEGEEEERGEDTIATKEAAALDEAERIQSRKAECGVCLEVVRRKETVKGRTFGILIGCRHVYCLSCITDWRNKSKS-----HECPECRVPSPLVVSSKTLVTDPERKARLVSNFQKSLSG 1329
            A  K C FFL+G CRYGD C +SH +    E EEE             A+ E  R+ S+  ECG+C EV+ +K    G  FG+L GC H +CL+C+ +WR+          +CP CRV +  ++ S  +VT PERK  L+  ++K+LSG
Sbjct:  229 APPKICTFFLQGLCRYGDTCFYSHSLPERVESEEE-----------MLAMGEEIRL-SQDLECGICYEVILQK----GERFGLLSGCNHSFCLTCLRNWRSSENQPRQTVRQCPVCRVETKFIIPSGRMVTRPERKKILIDVYRKNLSG 361          
BLAST of mRNA_C-linearis_contig7.14607.1 vs. uniprot
Match: A0A3R7GYF0_9STRA (RING-type E3 ubiquitin transferase n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7GYF0_9STRA)

HSP 1 Score: 105 bits (263), Expect = 9.480e-21
Identity = 59/149 (39.60%), Postives = 80/149 (53.69%), Query Frame = 1
Query:  898 ANTKPCAFFLRGRCRYGDCCRFSHDIARESEGEEEERGEDTIATKEAAALDEAERIQSRKAECGVCLEVVRRKETVKGRTFGILIGCRHVYCLSCITDWRN-----KSKSHECPECRVPSPLVVSSKTLVTDPERKARLVSNFQKSLSG 1329
            A  K C FFL+G CRYGD C ++H +    E EEE      I+  E   L       S+  ECG+C E V      KG  FG+L GC H +CL+C+ +WR      K    +CP CRV +  ++ S  +VT PERK  L+  ++K+LSG
Sbjct:  228 APPKICTFFLQGLCRYGDTCFYAHSLRENVENEEE-----MISMGEEIRL-------SQDLECGICYENV----VAKGERFGLLSGCNHSFCLTCLRNWRGIADQPKQTVRQCPVCRVETNFIIPSGRMVTKPERKKVLIDEYRKNLSG 360          
BLAST of mRNA_C-linearis_contig7.14607.1 vs. uniprot
Match: A0A6A3LV75_9STRA (RING-type E3 ubiquitin transferase n=2 Tax=Phytophthora TaxID=4783 RepID=A0A6A3LV75_9STRA)

HSP 1 Score: 103 bits (257), Expect = 6.210e-20
Identity = 59/148 (39.86%), Postives = 79/148 (53.38%), Query Frame = 1
Query:  898 ANTKPCAFFLRGRCRYGDCCRFSHDIARESEGEEEERGEDTIATKEAAALDEAERIQSRKAECGVCLEVVRRKETVKGRTFGILIGCRHVYCLSCITDWRN-----KSKSHECPECRVPSPLVVSSKTLVTDPERKARLVSNFQKSLS 1326
            A  K C FFL+G CRYG+ C +SH +    E EEE             A+ E  R+ S   ECG+C E +      KG  FG+L GC H +CLSC+ +WR      K    +CP CRV +  V+ S  +VT PERK  L+  ++K+LS
Sbjct:  221 APPKICTFFLQGLCRYGNSCFYSHSLPERVESEEE-----------MLAMGEEIRL-SADLECGICYENI----LAKGERFGLLSGCSHAFCLSCLRNWRGTAEQPKQTVRQCPVCRVETNFVIPSSRMVTKPERKKVLIDVYRKNLS 352          
BLAST of mRNA_C-linearis_contig7.14607.1 vs. uniprot
Match: A0A2R5GUW3_9STRA (RING-type E3 ubiquitin transferase n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GUW3_9STRA)

HSP 1 Score: 103 bits (256), Expect = 6.940e-20
Identity = 58/146 (39.73%), Postives = 78/146 (53.42%), Query Frame = 1
Query:  910 PCAFFLRGRCRYGDCCRFSHDIARESEGEEEERG--EDTIATKEAAALDEAERIQSRKAECGVCLEVVRRKETVKGRTFGILIGCRHVYCLSCITDWRNKSKS---------HECPECRVPSPLVVSSKTLVTDPERKARLVSNFQ 1314
            PC FF+RG CR+G+ CR++H  A  + G        + +      +A+D+ ER  SR+ ECG+CLEV+      K   FGIL GC H +CLSCI +WR+   S           CP CR PS  VV    +V DP RK  L+  +Q
Sbjct:  201 PCKFFMRGECRFGERCRYTHPGADGNGGYAMSPAPHQQSAPMSAESAMDQFERQASRELECGICLEVIASN---KDGRFGILTGCDHAFCLSCIKNWRSTEVSKGDDRKELVRRCPLCREPSYFVVPCDRMVRDPARKNALIEEYQ 343          
BLAST of mRNA_C-linearis_contig7.14607.1 vs. uniprot
Match: G5AF51_PHYSP (RING-type E3 ubiquitin transferase n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G5AF51_PHYSP)

HSP 1 Score: 102 bits (255), Expect = 9.310e-20
Identity = 58/148 (39.19%), Postives = 80/148 (54.05%), Query Frame = 1
Query:  898 ANTKPCAFFLRGRCRYGDCCRFSHDIARESEGEEEERGEDTIATKEAAALDEAERIQSRKAECGVCLEVVRRKETVKGRTFGILIGCRHVYCLSCITDWRN-----KSKSHECPECRVPSPLVVSSKTLVTDPERKARLVSNFQKSLS 1326
            A  K C FFL+G CRYGD C +SH +  + E EEE             A+ E  R+ S   ECG+C E +  K    G  FG+L GC H +CL+C+ +WR      K    +CP CRV +  ++ S  +VT PERK  L+  ++K+LS
Sbjct:  221 APPKICTFFLQGLCRYGDTCFYSHSLPEKVESEEE-----------MLAMGEEIRL-SADLECGICYENILGK----GERFGLLSGCNHSFCLTCLRNWRGSADQPKQTVRQCPMCRVETNFIIPSSRMVTKPERKKVLIDVYRKNLS 352          
BLAST of mRNA_C-linearis_contig7.14607.1 vs. uniprot
Match: H3H388_PHYRM (RING-type E3 ubiquitin transferase n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3H388_PHYRM)

HSP 1 Score: 102 bits (254), Expect = 1.040e-19
Identity = 56/145 (38.62%), Postives = 80/145 (55.17%), Query Frame = 1
Query:  904 TKPCAFFLRGRCRYGDCCRFSHDIARESEGEEEERGEDTIATKEAAALDEAERIQSRKAECGVCLEVVRRKETVKGRTFGILIGCRHVYCLSCITDWRN----KSKSHECPECRVPSPLVVSSKTLVTDPERKARLVSNFQKSLS 1326
            +K C FFL+G CRYGD C ++H +    E EEE             A+ E  R+ S+  ECG+C E +      KG  FG+L GC H +CL+C+ +WR     K    +CP CRV +  ++ S  +VT PERK  L+  ++K+LS
Sbjct:  207 SKICTFFLQGLCRYGDTCFYAHSLPERVESEEE-----------MLAMGEEIRL-SQDLECGICYENI----IGKGERFGLLSGCSHSFCLTCLRNWRGADQPKQTVRQCPVCRVETKFIIPSSRMVTKPERKKFLIDVYRKNLS 335          
BLAST of mRNA_C-linearis_contig7.14607.1 vs. uniprot
Match: M4BAQ4_HYAAE (RING-type E3 ubiquitin transferase n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BAQ4_HYAAE)

HSP 1 Score: 102 bits (254), Expect = 1.170e-19
Identity = 55/148 (37.16%), Postives = 81/148 (54.73%), Query Frame = 1
Query:  898 ANTKPCAFFLRGRCRYGDCCRFSHDIARESEGEEEERGEDTIATKEAAALDEAERIQSRKAECGVCLEVVRRKETVKGRTFGILIGCRHVYCLSCITDWRN-----KSKSHECPECRVPSPLVVSSKTLVTDPERKARLVSNFQKSLS 1326
            A  K C FFL+G CRYG+ C ++H ++  ++ EEE      +A  E           S+  ECG+C E V  K+      FG+L GC HV+CL+C+ +WR      K    +CP CRV +  ++ S  +VT PERK  L+  ++K+LS
Sbjct:  215 APPKICTFFLQGSCRYGNACFYAHSLSECAQSEEE-----MLARDEEICF-------SQDLECGICYECVVDKD----ERFGLLSGCNHVFCLTCLRNWRGNADQPKQTVRQCPVCRVETSFIIPSSRMVTKPERKKVLIDEYRKNLS 346          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig7.14607.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G211_ECTSI5.190e-4133.40RING-type E3 ubiquitin transferase n=1 Tax=Ectocar... [more]
A0A6H5L7F8_9PHAE2.300e-3648.84RING-type E3 ubiquitin transferase n=1 Tax=Ectocar... [more]
W2R264_PHYPN6.610e-2239.60RING-type E3 ubiquitin transferase n=38 Tax=Phytop... [more]
A0A329S6E1_9STRA2.190e-2139.60RING-type E3 ubiquitin transferase n=2 Tax=Phytoph... [more]
A0A3R7GYF0_9STRA9.480e-2139.60RING-type E3 ubiquitin transferase n=3 Tax=Phytoph... [more]
A0A6A3LV75_9STRA6.210e-2039.86RING-type E3 ubiquitin transferase n=2 Tax=Phytoph... [more]
A0A2R5GUW3_9STRA6.940e-2039.73RING-type E3 ubiquitin transferase n=1 Tax=Hondaea... [more]
G5AF51_PHYSP9.310e-2039.19RING-type E3 ubiquitin transferase n=1 Tax=Phytoph... [more]
H3H388_PHYRM1.040e-1938.62RING-type E3 ubiquitin transferase n=1 Tax=Phytoph... [more]
M4BAQ4_HYAAE1.170e-1937.16RING-type E3 ubiquitin transferase n=1 Tax=Hyalope... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig7contigC-linearis_contig7:3713166..3716552 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score165.2
Seed ortholog evalue3.4e-38
Seed eggNOG ortholog2880.D7G211
Preferred nameFANCE
KEGG koko:K10892,ko:K14404
KEGG Pathwayko03015,ko03460,ko05164,map03015,map03460,map05164
KEGG ModuleM00413
Hectar predicted targeting categorymitochondrion
EggNOG free text desc.protein ubiquitination
EggNOG OGsKOG1039@1,KOG1039@2759
Ec32 ortholog descriptionZinc finger, RING-type
Ec32 orthologEc-07_003370.1
COG Functional cat.L
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko03019,ko03021,ko03400
Exons6
Model size1840
Cds size669
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig7.14607.1prot_C-linearis_contig7.14607.1Chordaria linearis ClinC8C monoicouspolypeptideC-linearis_contig7 3714470..3716050 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930330.5259457-UTR-C-linearis_contig7:3713165..37133631622930330.5259457-UTR-C-linearis_contig7:3713165..3713363Chordaria linearis ClinC8C monoicousUTRC-linearis_contig7 3713166..3713363 +
1690881015.827344-UTR-C-linearis_contig7:3713165..37133631690881015.827344-UTR-C-linearis_contig7:3713165..3713363Chordaria linearis ClinC8C monoicousUTRC-linearis_contig7 3713166..3713363 +
1622930330.543917-UTR-C-linearis_contig7:3713617..37140601622930330.543917-UTR-C-linearis_contig7:3713617..3714060Chordaria linearis ClinC8C monoicousUTRC-linearis_contig7 3713618..3714060 +
1690881015.838376-UTR-C-linearis_contig7:3713617..37140601690881015.838376-UTR-C-linearis_contig7:3713617..3714060Chordaria linearis ClinC8C monoicousUTRC-linearis_contig7 3713618..3714060 +
1622930330.5647244-UTR-C-linearis_contig7:3714441..37144691622930330.5647244-UTR-C-linearis_contig7:3714441..3714469Chordaria linearis ClinC8C monoicousUTRC-linearis_contig7 3714442..3714469 +
1690881015.8470497-UTR-C-linearis_contig7:3714441..37144691690881015.8470497-UTR-C-linearis_contig7:3714441..3714469Chordaria linearis ClinC8C monoicousUTRC-linearis_contig7 3714442..3714469 +
1622930330.6480622-UTR-C-linearis_contig7:3716050..37165521622930330.6480622-UTR-C-linearis_contig7:3716050..3716552Chordaria linearis ClinC8C monoicousUTRC-linearis_contig7 3716051..3716552 +
1690881015.8936858-UTR-C-linearis_contig7:3716050..37165521690881015.8936858-UTR-C-linearis_contig7:3716050..3716552Chordaria linearis ClinC8C monoicousUTRC-linearis_contig7 3716051..3716552 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930330.5816061-CDS-C-linearis_contig7:3714469..37146021622930330.5816061-CDS-C-linearis_contig7:3714469..3714602Chordaria linearis ClinC8C monoicousCDSC-linearis_contig7 3714470..3714602 +
1690881015.8554099-CDS-C-linearis_contig7:3714469..37146021690881015.8554099-CDS-C-linearis_contig7:3714469..3714602Chordaria linearis ClinC8C monoicousCDSC-linearis_contig7 3714470..3714602 +
1622930330.5957558-CDS-C-linearis_contig7:3714659..37149251622930330.5957558-CDS-C-linearis_contig7:3714659..3714925Chordaria linearis ClinC8C monoicousCDSC-linearis_contig7 3714660..3714925 +
1690881015.8639624-CDS-C-linearis_contig7:3714659..37149251690881015.8639624-CDS-C-linearis_contig7:3714659..3714925Chordaria linearis ClinC8C monoicousCDSC-linearis_contig7 3714660..3714925 +
1622930330.6143272-CDS-C-linearis_contig7:3715422..37155571622930330.6143272-CDS-C-linearis_contig7:3715422..3715557Chordaria linearis ClinC8C monoicousCDSC-linearis_contig7 3715423..3715557 +
1690881015.8724227-CDS-C-linearis_contig7:3715422..37155571690881015.8724227-CDS-C-linearis_contig7:3715422..3715557Chordaria linearis ClinC8C monoicousCDSC-linearis_contig7 3715423..3715557 +
1622930330.6313326-CDS-C-linearis_contig7:3715915..37160501622930330.6313326-CDS-C-linearis_contig7:3715915..3716050Chordaria linearis ClinC8C monoicousCDSC-linearis_contig7 3715916..3716050 +
1690881015.8810503-CDS-C-linearis_contig7:3715915..37160501690881015.8810503-CDS-C-linearis_contig7:3715915..3716050Chordaria linearis ClinC8C monoicousCDSC-linearis_contig7 3715916..3716050 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-linearis_contig7.14607.1

>prot_C-linearis_contig7.14607.1 ID=prot_C-linearis_contig7.14607.1|Name=mRNA_C-linearis_contig7.14607.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=223bp
MAAVASAAARVKALKAAHQAAKKTAAAAAAAASAAAAAASAGRSEPTTNT
AGRRQQQQTGSTSGSTDKQQEEKKQRANTKPCAFFLRGRCRYGDCCRFSH
DIARESEGEEEERGEDTIATKEAAALDEAERIQSRKAECGVCLEVVRRKE
TVKGRTFGILIGCRHVYCLSCITDWRNKSKSHECPECRVPSPLVVSSKTL
VTDPERKARLVSNFQKSLSGGG*
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mRNA from alignment at C-linearis_contig7:3713166..3716552+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-linearis_contig7.14607.1 ID=mRNA_C-linearis_contig7.14607.1|Name=mRNA_C-linearis_contig7.14607.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=3387bp|location=Sequence derived from alignment at C-linearis_contig7:3713166..3716552+ (Chordaria linearis ClinC8C monoicous)
CAGGGGTCGTGTAAAAACGGAGACGCGTGCCGCTTCACCCACGGCACCTC ACACAAGCGCGAGTTCCCCCCACAAGGGGGGGAGGCCGCTGGACGCGTAT CAGCCCCGGCAGCGGAAGAAGAAGGACCGGCGACTGCCCCAACCACCAAG AACAAGAAGAAGCCGTGCAGGTTCTTCGTCAAAGGCAAGGCGGCCGCAGT TTACGAGAGAGAGAGAGAGAGAGAGAGAGAAAGAGCAGACCCTGAACGGA ACGATATAGATATGGCTGAAGGGCTGAACTCCTTGCTTCCACCACACGAA ACACGAGAATCGAAGCAACCCCCTGATTAATTACTGGTTGCGTCCCCATC TGCGCGCGAACTGCTGTTGTGCGTACACGCACGAATCCGGCACTGACCCT CCCCTTCCCCCCCCCTCCCCTCCCGGTGCCTACCGTTTCCACCACAGGCA AGTGCACGAGGGGGGAAAGCTGCCCGTTCCTGCACTATATCGGTGACGAA TCGGGCTCCTCGATCTCAGCCAATGGCAAGAACAAAGTCAAAGACGGATA CAAAGCAGGCACCCCTGACACTGACGCTGACAGATGCACGGTAAAGAGCA AGCCCAAGGGAACGCCCAAGGTCAAGGTCAAGGTCAAACCCAGCACAAAA GCAGTAGTCGACGGCAGACGAGGCGACAACGGAGCACCGATAGTGACCGC GACCGTTACCGCCGCCAAACGCTCAGCTCCGGGCGAGGCCGCGGCAGGTG CCTCTCAGGCGGCTGCTGGAGGCCCCCCCATAAAGCCTCGGCTTTTGGGA AGCTCCTCCTCCCTGTCCCTGTCCCTGTCCTCGAAGGCTAGAGTTGTTGG AGGTGCGGTGAAAGCGGCGGCGTCGGCGGGAGGTTCGACGGGTTCGTGGG CCGGCATCGTTAAGAGTGAGTGCGACAAACAACATCGAATCCTGGTGTAC ATGCACACATCACGGTATTTAGACCGATAGCAAGGCTTCTTGCAAGAAGA CCCTCAGCATTTCGGTGCAGCCTTGGGTGGGACCGATCCGCGAATCACAG CGCTAGCAAATCGGGAGGGACCTGACTCACTGACCCGGCGGGTCGAGTCG GCGTGTGTCGTGTTTTGTTGTGGTTGCCACTGACAAAACCTTTTGTATAC TACCCTGAAGCGATATACCATAGGCTTTCGCTGTATTATCCATCCATATC ATCACAACGTCTTTCGTTTTTCAACAGCAACAGCCGCGGACGCTGACCGA GCTTCTGCTAGCACCAGCACCATTAGCACCAGCACCACCAGCAGGGATGA AGACATGGCGGCGGTGGCCTCCGCTGCGGCCCGGGTTAAGGCCCTCAAGG CGGCCCACCAGGCAGCGAAAAAAACTGCTGCTGCTGCTGCTGCTGCTGCT TCGGCCGCCGCTGCTGCTGCTTCTGCTGGCCGCAGTGGTGGTGCTGCGGC GTTCGCGGACAACGCTTGCATTACTCACACCTTCTCCGCAGGAGAACCGA CGACGAACACGGCTGGCCGGCGGCAGCAGCAGCAGACCGGCAGCACAAGC GGAAGCACCGACAAGCAGCAGGAGGAAAAGAAGCAGCGAGCAAACACGAA GCCATGCGCTTTCTTCCTTCGCGGGCGATGCCGGTACGGCGACTGCTGCA GGTTCTCCCACGACATCGCCCGCGAATCGGAAGGGGAGGAGGAGGAGCGG GGGGAGGATACGATTGCAACTAAGGAAGCGGCGGCCCTAGACGAGGCGGA GAGAATTCAGGTGCGTGGGTTTTGTTGGTCGGTTGGTGCGTCGGTCGGTC GATTTGCGCACGGCTTTTCATGGTGGTCATGGTCGTACTCGTACACACGA ATAGCGTCAGCGTCTCTTGGTATGGTTGTCTATTTTTTGTGTTGCTGTGG GAAGTTGGAGAGAGACAGAGAGAGAGAGAGAGCAAAGACAGAAGAAAGAG CGATACTTCGAAGTATGCTCTAGACGAAACCTCGTTGAAAAGGAAAGCAT TCGCCCTCGTTGGCAGTGGTGGAAGAGCTTTGGGAGAGCGGCTCGTGCCG ACTCAAAGAAGAGGAAGTACTTCTACGTGAGTTTGTTTGGCCCGCACGCG CGAGCACGTGTGGGTATCTCCGCGCGCACGTTGAGCCGCAAAGTGTTGAG TTGTGAGGTTCGGGTCAGGCTGTGCTTCCGCCGAGGTTGTGTTGATATCA ATGTCGTGATGCGTTTCGATGTTCTCACCCCCCCTCGCCTCATGCGACGT GCCCCAGTCTCGAAAGGCGGAGTGCGGCGTGTGTCTGGAGGTGGTGAGAA GAAAGGAAACGGTCAAGGGTAGGACTTTCGGCATCCTCATTGGCTGCAGG CACGTCTACTGCCTCAGCTGCATCACCGATTGGCGAAACAAGGTAGAGGA TCAGTGAGCAGAGTTGGTCTCGATGCCTTTCCCCCCCTTCCGCTCCTGTT TTGTTCTGTGGCCACCTCACCACACCCTGCTTATTTCTGGCCTGTCCCTT GTAGCCTGCCTGTCTTTCTCTGCACCGTCGGCTCTCGCGGAGGAATTTTT GTAGGGAGATGCATCTCTGGTGTTTTTGAGCTGGCAAAACAGAATCACAG AGAAGAATAAGTGCAGGACGACGAAGCAACGCTGTTTCGATGCACTAATC CCCGCTCCACTTTCTCTCCGCCTGTCTTCCCTTTTTGGTCCGTGTGCGCT TCTCCCTAAATGTTGTACGTGTGTGTGTGTGGTGCGTGGTGTCCATCCAG AGCAAGAGCCACGAGTGCCCAGAGTGTCGAGTGCCCTCGCCCCTGGTGGT GTCGAGCAAAACTCTGGTGACAGACCCCGAGAGGAAGGCACGTCTCGTGT CCAACTTCCAGAAATCTCTTTCAGGCGGCGGCTAAGTAAACTTGTGCTGG TGTGGGGGTTCAGAACAAGGTGTCTTTTTCGACGCATTTTTTCTGCTGGC CTTTCTTCTTCTCTCTCTAGACGTTGTGTCGTCTTCGGCGCATCAGGGGG GAGATTTGTAGATCAATATAGACTAAGCGTTTCCCGTTGGATAGCCGTTG GAGTGATGGCTTTTGGGTAGCGTTGCACGGCGGTGTAGTTTATTTGCATA CATTTCGTGCTCTCAAGTGCCCCGTGAGTTTTGGAGCAAGCACAAAGACA GGGAGGGAGATCGGGGGTTGTTAGCTTTCTTGTAGCCTGCGCTGGTTTGG ACCTGCAACAGGGGTTGCGTGAAATGTCTACCGTAATGTAGGGTCACGAA GAGAACGTGACGGAATACAACAATGGACTACACACAAGACCAGTGACACT CTTTGACCTGACCTCAGATGAGCGTTGTCTCTGGACATGCATGCTGCACT CTGCAAGTGCTCAATAATACAATAACACGTCAACGTT
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Coding sequence (CDS) from alignment at C-linearis_contig7:3713166..3716552+

>mRNA_C-linearis_contig7.14607.1 ID=mRNA_C-linearis_contig7.14607.1|Name=mRNA_C-linearis_contig7.14607.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=1338bp|location=Sequence derived from alignment at C-linearis_contig7:3713166..3716552+ (Chordaria linearis ClinC8C monoicous)
ATGGCGGCGGTGGCCTCCGCTGCGGCCCGGGTTAAGGCCCTCAAGGCGGC
CCACCAGGCAGCGAAAAAAACTGCTGCTGCTGCTGCTGCTGCTGCTTCGG
CCGCCGCTGCTGCTGCTTCTGCTGGCCGCAGTGATGGCGGCGGTGGCCTC
CGCTGCGGCCCGGGTTAAGGCCCTCAAGGCGGCCCACCAGGCAGCGAAAA
AAACTGCTGCTGCTGCTGCTGCTGCTGCTTCGGCCGCCGCTGCTGCTGCT
TCTGCTGGCCGCAGTGAACCGACGACGAACACGGCTGGCCGGCGGCAGCA
GCAGCAGACCGGCAGCACAAGCGGAAGCACCGACAAGCAGCAGGAGGAAA
AGAAGCAGCGAGCAAACACGAAGCCATGCGCTTTCTTCCTTCGCGGGCGA
TGCCGGTACGGCGACTGCTGCAGGTTCTCCCACGACATCGCCCGCGAATC
GGAAGGGGAGGAGGAGGAGCGGGGGGAGGATACGATTGCAACTAAGGAAG
CGGCGGCCCTAGACGAGGCGGAGAGAATTCAGAACCGACGACGAACACGG
CTGGCCGGCGGCAGCAGCAGCAGACCGGCAGCACAAGCGGAAGCACCGAC
AAGCAGCAGGAGGAAAAGAAGCAGCGAGCAAACACGAAGCCATGCGCTTT
CTTCCTTCGCGGGCGATGCCGGTACGGCGACTGCTGCAGGTTCTCCCACG
ACATCGCCCGCGAATCGGAAGGGGAGGAGGAGGAGCGGGGGGAGGATACG
ATTGCAACTAAGGAAGCGGCGGCCCTAGACGAGGCGGAGAGAATTCAGTC
TCGAAAGGCGGAGTGCGGCGTGTGTCTGGAGGTGGTGAGAAGAAAGGAAA
CGGTCAAGGGTAGGACTTTCGGCATCCTCATTGGCTGCAGGCACGTCTAC
TGCCTCAGCTGCATCACCGATTGGCGAAACAAGTCTCGAAAGGCGGAGTG
CGGCGTGTGTCTGGAGGTGGTGAGAAGAAAGGAAACGGTCAAGGGTAGGA
CTTTCGGCATCCTCATTGGCTGCAGGCACGTCTACTGCCTCAGCTGCATC
ACCGATTGGCGAAACAAGAGCAAGAGCCACGAGTGCCCAGAGTGTCGAGT
GCCCTCGCCCCTGGTGGTGTCGAGCAAAACTCTGGTGACAGACCCCGAGA
GGAAGGCACGTCTCGTGTCCAACTTCCAGAAATCTCTTTCAGGCGGCGGC
TAAAGCAAGAGCCACGAGTGCCCAGAGTGTCGAGTGCCCTCGCCCCTGGT
GGTGTCGAGCAAAACTCTGGTGACAGACCCCGAGAGGAAGGCACGTCTCG
TGTCCAACTTCCAGAAATCTCTTTCAGGCGGCGGCTAA
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