mRNA_C-linearis_contig112.1520.1 (mRNA) Chordaria linearis ClinC8C monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-linearis_contig112.1520.1
Unique NamemRNA_C-linearis_contig112.1520.1
TypemRNA
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Homology
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BLAST of mRNA_C-linearis_contig112.1520.1 vs. uniprot
Match: D8LNJ2_ECTSI (Hlip n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LNJ2_ECTSI)

HSP 1 Score: 367 bits (943), Expect = 2.000e-121
Identity = 202/242 (83.47%), Postives = 213/242 (88.02%), Query Frame = 1 
Query:    1 MRLSASIAMGVGCVSVVQVSSFAFVQVPLGA-PAGCTSCVGSSYQQV-GFRSSLRARPRRLSVAMSAGADGEGGDGMGDD-ADDDMSSAVATKPKKKFNSELDDLVGEMAGRTSDEPVIIPRGAGIAPMAPGPIKADPIPGMDDDDIPGKIVLSPEVLAEQQKGLEKIAQQLRRERLDKEAEDAITFGFCPRAELWNGRSAMFGITVGMLTELWTGQSIPQQVETFAQLLGLLPLDYDTYFQ 717
            MRLSAS+A+GVGCVSVVQVSSFAFV  PLGA P+GCTSC   S Q   G  SS R RP RL VA+SA ADGEGG   G++ ADDD SSAVATKPK+K N ELDDLV EMAGR+ DEP++IPRGAGIAPMAPGPIK DPIPGMDDDDIPGKIVL PEVLAEQQKGLEKIAQQLRRERLDKEAEDAITFGFCPRAELWNGRSAMFGITVGMLTE WTGQSIPQQ+ETFAQLLGLLPLDYDTYFQ
Sbjct:    1 MRLSASVALGVGCVSVVQVSSFAFV--PLGATPSGCTSCTAHSSQATSGSGSSSRVRPGRLLVALSA-ADGEGGSDSGEETADDDTSSAVATKPKRKVNPELDDLVSEMAGRSDDEPIVIPRGAGIAPMAPGPIKPDPIPGMDDDDIPGKIVLPPEVLAEQQKGLEKIAQQLRRERLDKEAEDAITFGFCPRAELWNGRSAMFGITVGMLTEYWTGQSIPQQIETFAQLLGLLPLDYDTYFQ 239
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BLAST of mRNA_C-linearis_contig112.1520.1 vs. uniprot
Match: A0A836CEG8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CEG8_9STRA)

HSP 1 Score: 123 bits (309), Expect = 3.400e-29
Identity = 70/126 (55.56%), Postives = 91/126 (72.22%), Query Frame = 1 
Query:  355 RGAGIAPMA---PGPIKADPIPG---MDDDDIPGKIVLSPEVLAEQQKGLEKIAQQLRRERLDKEAEDAITFGFCPRAELWNGRSAMFGITVGMLTELWTGQSIPQQVETFAQLLGLLPLDYDTYF 714
            R + +AP A    GP  AD +     + DD++PGKIV+    LA+QQ  LEK A+QLRR+RLD+EAE+A   G+ P AE+ NGR+AMF I VG+LTE WTGQS+PQQVET A ++GLLPLDY++ F
Sbjct:   42 RWSAVAPEAGADAGPDTADEVEDEGIIADDNVPGKIVVDDATLAQQQIDLEKYARQLRRQRLDREAEEARLLGWTPAAEINNGRAAMFFIVVGILTEYWTGQSMPQQVETMASVMGLLPLDYESMF 167
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BLAST of mRNA_C-linearis_contig112.1520.1 vs. uniprot
Match: A0A7V5I693_9BACT (Uncharacterized protein n=1 Tax=bacterium TaxID=1869227 RepID=A0A7V5I693_9BACT)

HSP 1 Score: 86.3 bits (212), Expect = 2.700e-16
Identity = 43/87 (49.43%), Postives = 60/87 (68.97%), Query Frame = 1 
Query:  430 IPGKIVLSPEVLAEQQKGLEKIAQQLRRERLDKEAEDAITFGFCPRAELWNGRSAMFGITVGMLTELWTGQSIPQQVETFAQLLGLL 690
            +PG+  LS   LAEQ++ L  +A++ +  RL KEAE    FGFC  AE+ NGR+AMF    GMLTE WTGQ++PQQ+E   ++LG++
Sbjct:   56 VPGRYKLSAVELAEQRRALRAVAERYKAARLAKEAESRRVFGFCRNAEVINGRTAMFFFVTGMLTEYWTGQTMPQQIELLLRILGII 142
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BLAST of mRNA_C-linearis_contig112.1520.1 vs. uniprot
Match: K0TDY7_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0TDY7_THAOC)

HSP 1 Score: 85.9 bits (211), Expect = 9.610e-16
Identity = 59/154 (38.31%), Postives = 86/154 (55.84%), Query Frame = 1 
Query:  256 AVATKPKKK-FNSELDDLVGEMAGRTSDEPVIIPRGAGIAPMAPGPIKADPIPGMDDD----DIPGKIVLSPEVLAEQQKGLEKIAQQLRRERLDKEAEDAITFGFCPRAELWNGRSAMFGITVGMLTELWTGQSIPQQVETFAQLLGLLPLDY 702
            A A  P  + + S +   + E A   SDEP++ P    + P   G    D     DDD    ++PGKIV++   LA Q   L K+  + R+ R D+E EDA   GF P+AE++NGR+AMF + VG+LTE W+G SI  Q+E  A++ G +  D+
Sbjct:   29 ARAVSPSTRIYESTVPANLAEQAKEISDEPLMNPDNPNL-PALKGDYDWDAEYAADDDWITENVPGKIVVNEVDLAAQVTELTKLEDKYRKIREDQEYEDARIIGFVPKAEMYNGRAAMFFLVVGLLTEYWSGISITGQIEEMARVGGFIGPDF 181
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BLAST of mRNA_C-linearis_contig112.1520.1 vs. uniprot
Match: A9BKE1_HEMAN (Hlip n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A9BKE1_HEMAN)

HSP 1 Score: 84.0 bits (206), Expect = 1.260e-15
Identity = 41/87 (47.13%), Postives = 63/87 (72.41%), Query Frame = 1 
Query:  430 IPGKIVLSPEVLAEQQKGLEKIAQQLRRERLDKEAEDAITFGFCPRAELWNGRSAMFGITVGMLTELWTGQSIPQQVETFAQLLGLL 690
            IPGKI+LS  V++E++  L+ ++++ ++ER+ KE  D   FGF   +E+ NGR AMF I  G+LTE+WTGQ+IP Q+ET  + LG++
Sbjct:   45 IPGKIILSKTVISERELKLKSLSEKWKKERIAKENFDKKAFGFTKNSEILNGRIAMFFIITGLLTEIWTGQTIPDQIETIIRTLGII 131
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BLAST of mRNA_C-linearis_contig112.1520.1 vs. uniprot
Match: Q98RP5_GUITH (High light inducible protein n=1 Tax=Guillardia theta TaxID=55529 RepID=Q98RP5_GUITH)

HSP 1 Score: 83.6 bits (205), Expect = 1.550e-15
Identity = 44/91 (48.35%), Postives = 66/91 (72.53%), Query Frame = 1 
Query:  418 DDDDIPGKIVLSPEVLAEQQKGLEKIAQQLRRERLDKEAEDAITFGFCPRAELWNGRSAMFGITVGMLTELWTGQSIPQQVETFAQLLGLL 690
            DD++IPGKIVLS E ++ ++K L+ +A++ + ERL+KE  +   FGF   +E+ NGR AMF IT G+LTELWT QS+  Q+E   ++LG++
Sbjct:   36 DDNNIPGKIVLSKEEISNREKKLKILAEKWKNERLEKEILENKIFGFSKYSEIINGRIAMFFITTGLLTELWTKQSLISQIEIMLRVLGII 126
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BLAST of mRNA_C-linearis_contig112.1520.1 vs. uniprot
Match: M1V653_CYAM1 (Similar to high light inducible protein n=1 Tax=Cyanidioschyzon merolae (strain NIES-3377 / 10D) TaxID=280699 RepID=M1V653_CYAM1)

HSP 1 Score: 85.9 bits (211), Expect = 1.710e-15
Identity = 43/87 (49.43%), Postives = 60/87 (68.97%), Query Frame = 1 
Query:  430 IPGKIVLSPEVLAEQQKGLEKIAQQLRRERLDKEAEDAITFGFCPRAELWNGRSAMFGITVGMLTELWTGQSIPQQVETFAQLLGLL 690
            +PG+  LS   LAEQ++ L  +A++ +  RL KEAE    FGFC  AE+ NGR+AMF    GMLTE WTGQ++PQQ+E   ++LG++
Sbjct:  119 VPGRYKLSAIELAEQRRALRAVAERYKAARLAKEAESRRVFGFCRNAEVINGRTAMFFFVTGMLTEYWTGQTMPQQIELLLRILGII 205
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BLAST of mRNA_C-linearis_contig112.1520.1 vs. uniprot
Match: A0A7J7IMA7_9RHOD (Uncharacterized protein n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7IMA7_9RHOD)

HSP 1 Score: 84.7 bits (208), Expect = 6.120e-15
Identity = 42/86 (48.84%), Postives = 59/86 (68.60%), Query Frame = 1 
Query:  433 PGKIVLSPEVLAEQQKGLEKIAQQLRRERLDKEAEDAITFGFCPRAELWNGRSAMFGITVGMLTELWTGQSIPQQVETFAQLLGLL 690
            PG+  LS   LAEQ++ +  +A++ + ER+ +EAE    FGFC  AE+ NGR+AMF    GMLTE WTGQ++PQQ+E   ++LG L
Sbjct:  137 PGRYKLSAAELAEQRRAIRAVAERYKAERIAREAEARRVFGFCRNAEIINGRTAMFFFATGMLTEYWTGQTMPQQIELLLRILGFL 222
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BLAST of mRNA_C-linearis_contig112.1520.1 vs. uniprot
Match: A0A5J4YWB8_PORPP (Light-harvesting complex-like protein OHP2, chloroplastic n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YWB8_PORPP)

HSP 1 Score: 80.5 bits (197), Expect = 4.780e-14
Identity = 42/86 (48.84%), Postives = 60/86 (69.77%), Query Frame = 1 
Query:  433 PGKIVLSPEVLAEQQKGLEKIAQQLRRERLDKEAEDAITFGFCPRAELWNGRSAMFGITVGMLTELWTGQSIPQQVETFAQLLGLL 690
            PG   L+P  LAEQ+K L  ++++ + ER+D+E E +  FG   RAE+ NGR AMF +  G+LTE WTG++IP+QVET  + LGL+
Sbjct:   79 PGMRELTPAELAEQKKVLVALSEEWKAERMDREFEQSRLFGLTRRAEILNGRVAMFFLATGLLTEYWTGENIPEQVETLFRTLGLI 164
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BLAST of mRNA_C-linearis_contig112.1520.1 vs. uniprot
Match: A0A7S2P2S9_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2P2S9_9STRA)

HSP 1 Score: 79.7 bits (195), Expect = 7.280e-14
Identity = 42/99 (42.42%), Postives = 66/99 (66.67%), Query Frame = 1 
Query:  418 DDDD-----IPGKIVLSPEVLAEQQKGLEKIAQQLRRERLDKEAEDAITFGFCPRAELWNGRSAMFGITVGMLTELWTGQSIPQQVETFAQLLGLLPLD 699
            DD+D     +PGK+V++   LA+Q   L ++ ++ R+ER+ KE ED    G+ P+AE++NGR AMF + VG+LTE WTG +IP Q+E   ++ G + +D
Sbjct:   57 DDEDWITENVPGKVVMNEIDLAKQVSALNQLEEKWRKERVYKEYEDKALLGWTPQAEMYNGRFAMFFLVVGLLTEYWTGVTIPGQIEEMLRVGGFIDVD 155
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig112.1520.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LNJ2_ECTSI2.000e-12183.47Hlip n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LNJ2_EC... [more]
A0A836CEG8_9STRA3.400e-2955.56Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7V5I693_9BACT2.700e-1649.43Uncharacterized protein n=1 Tax=bacterium TaxID=18... [more]
K0TDY7_THAOC9.610e-1638.31Uncharacterized protein n=1 Tax=Thalassiosira ocea... [more]
A9BKE1_HEMAN1.260e-1547.13Hlip n=1 Tax=Hemiselmis andersenii TaxID=464988 Re... [more]
Q98RP5_GUITH1.550e-1548.35High light inducible protein n=1 Tax=Guillardia th... [more]
M1V653_CYAM11.710e-1549.43Similar to high light inducible protein n=1 Tax=Cy... [more]
A0A7J7IMA7_9RHOD6.120e-1548.84Uncharacterized protein n=1 Tax=Cyanidiococcus yan... [more]
A0A5J4YWB8_PORPP4.780e-1448.84Light-harvesting complex-like protein OHP2, chloro... [more]
A0A7S2P2S9_9STRA7.280e-1442.42Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig112contigC-linearis_contig112:171831..176710 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score376.3
Seed ortholog evalue1e-101
Seed eggNOG ortholog2880.D8LNJ2
Preferred nameHLIP
Hectar predicted targeting categorychloroplast
GOsGO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008150,GO:0009314,GO:0009416,GO:0009507,GO:0009534,GO:0009535,GO:0009536,GO:0009579,GO:0009628,GO:0009642,GO:0016020,GO:0031976,GO:0031984,GO:0034357,GO:0042651,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044436,GO:0044444,GO:0044446,GO:0044464,GO:0050896,GO:0055035
EggNOG OGs2CXIH@1,2RXUG@2759
Ec32 ortholog descriptionChlorophyll a/b binding protein domain
Ec32 orthologEc-01_000400.1
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons4
Model size1788
Cds size720
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig112.1520.1prot_C-linearis_contig112.1520.1Chordaria linearis ClinC8C monoicouspolypeptideC-linearis_contig112 171831..175642 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927487.9233735-CDS-C-linearis_contig112:171830..1719761622927487.9233735-CDS-C-linearis_contig112:171830..171976Chordaria linearis ClinC8C monoicousCDSC-linearis_contig112 171831..171976 +
1690879729.3044357-CDS-C-linearis_contig112:171830..1719761690879729.3044357-CDS-C-linearis_contig112:171830..171976Chordaria linearis ClinC8C monoicousCDSC-linearis_contig112 171831..171976 +
1622927487.935924-CDS-C-linearis_contig112:173326..1736011622927487.935924-CDS-C-linearis_contig112:173326..173601Chordaria linearis ClinC8C monoicousCDSC-linearis_contig112 173327..173601 +
1690879729.3175786-CDS-C-linearis_contig112:173326..1736011690879729.3175786-CDS-C-linearis_contig112:173326..173601Chordaria linearis ClinC8C monoicousCDSC-linearis_contig112 173327..173601 +
1622927487.9482734-CDS-C-linearis_contig112:174809..1749751622927487.9482734-CDS-C-linearis_contig112:174809..174975Chordaria linearis ClinC8C monoicousCDSC-linearis_contig112 174810..174975 +
1690879729.328666-CDS-C-linearis_contig112:174809..1749751690879729.328666-CDS-C-linearis_contig112:174809..174975Chordaria linearis ClinC8C monoicousCDSC-linearis_contig112 174810..174975 +
1622927487.9628437-CDS-C-linearis_contig112:175509..1756421622927487.9628437-CDS-C-linearis_contig112:175509..175642Chordaria linearis ClinC8C monoicousCDSC-linearis_contig112 175510..175642 +
1690879729.3405151-CDS-C-linearis_contig112:175509..1756421690879729.3405151-CDS-C-linearis_contig112:175509..175642Chordaria linearis ClinC8C monoicousCDSC-linearis_contig112 175510..175642 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927487.973815-UTR-C-linearis_contig112:175642..1767101622927487.973815-UTR-C-linearis_contig112:175642..176710Chordaria linearis ClinC8C monoicousUTRC-linearis_contig112 175643..176710 +
1690879729.3526812-UTR-C-linearis_contig112:175642..1767101690879729.3526812-UTR-C-linearis_contig112:175642..176710Chordaria linearis ClinC8C monoicousUTRC-linearis_contig112 175643..176710 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-linearis_contig112.1520.1

>prot_C-linearis_contig112.1520.1 ID=prot_C-linearis_contig112.1520.1|Name=mRNA_C-linearis_contig112.1520.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=240bp
MRLSASIAMGVGCVSVVQVSSFAFVQVPLGAPAGCTSCVGSSYQQVGFRS
SLRARPRRLSVAMSAGADGEGGDGMGDDADDDMSSAVATKPKKKFNSELD
DLVGEMAGRTSDEPVIIPRGAGIAPMAPGPIKADPIPGMDDDDIPGKIVL
SPEVLAEQQKGLEKIAQQLRRERLDKEAEDAITFGFCPRAELWNGRSAMF
GITVGMLTELWTGQSIPQQVETFAQLLGLLPLDYDTYFQ*
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mRNA from alignment at C-linearis_contig112:171831..176710+

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-linearis_contig112.1520.1 ID=mRNA_C-linearis_contig112.1520.1|Name=mRNA_C-linearis_contig112.1520.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=4880bp|location=Sequence derived from alignment at C-linearis_contig112:171831..176710+ (Chordaria linearis ClinC8C monoicous)
ATGCGTCTTTCGGCAAGCATCGCGATGGGGGTGGGTTGTGTGTCGGTGGT
GCAGGTGTCCTCGTTCGCGTTCGTGCAAGTGCCATTGGGGGCACCAGCAG
GATGCACATCGTGTGTGGGAAGCTCTTATCAACAGGTGGGTTTTCGGTTC
CCTGGGGAGGGGTCGTGGGGGAGAGCGGGCGTGATTTGGTAGCAGGGACA
AGCACTGACACCAGTCCAAGGTTCGCACCTGGTTGTGATGAGTTTAGGCC
TGCATAACTAAAAAAACAAAAAACATACTTCTGTACAAGCCTCTGGATGT
TATATTGGGTGTGTGACGTACATGGCGGTGTGTCATGTTGGCTACTGGTG
TTGTGGCCAAAAGACGGCAGCTGCCTACCCCGTGTCTGCGCTATCCTGAT
TCATGGGCACGCTCGCGAGTTCATGCGTGCACACGCTCGAAAGCCACGCA
CCACTATTAAGTCCCAGAGTAGGAGGCTTGCATCTATGAACTATGCTTTG
CATCACAGCAATCATCCACCGAGCCGGAACTGACATCACAACCGGCACAC
GCCTCTAGAATGCTGCTTCGGATGTGTTGCGGTTGAGTATTGTACAACAC
CTGAGAATTCATGTACGCAAGGCATGGCCTACACGAGTTGAGCACAGAAA
GCCGACGTCTCTTAGTGGCGTTGCCCAAAAGGTGTTGGTGCTTTCAAAGT
CTTGGGGTATTTCCAGCAACGCGACGAGGTGCTTATGAAAAACGGTATTT
GTCGGGTGCGAAAATCGCCAGCAGCTACATACCATCGTATGTAATAACCT
GCAAGGATGGGCGTTGTGTCCCTTCCTCCAAGGCCGTGCCAAGCTTAGCA
ATACAAGCAAAATGCAACATGAATGTACCACGTCCCGGAATAAGGAATTA
AGACTATTTACAACGGTAAATATGGACTCGCCCACGGTGCCACCGCAAAG
TCATTCAATTAGCGCCTCACGTGAAGCTACGCTTTGACTCCGTGCGATAG
TGTATCCTTTCTCACCCTCTAGGAGATACCGATGCTGTGCGCTTATCGTT
CGGCGACGTGGATTTTCTACCGAAATACACAATATATTGTTTCCCCATGG
TAAGACAACGCGTATAGTAGACGAGGCTAAAAGACACATTTTGGGAGGGA
GGCTTTGGGGTGGCAACGCGAACGGAAGCATGTGGTTAAACGCGACGCTC
TGGGGGTGAAAACAGCAGCATTTGTTTAGAAACTGGCACCAGCCAGACTG
GAGATTGTGGTGAGTCGTGTGAGCGGAGTCGGTGCCTTTGTCGCTAAGAA
CGTACGTGACTAGTGTCTGTTTCAAAAAAATGTATGTTGTACTTCCAGCA
GACCCTGCGTTTGAACCATCCCCTCCGTTCACGCCTATATACCGAGCACG
TCGTCGAACATGCCGCACCATTATCAACTCCCGTTCCGCCATGGCCCCGT
ACCATACCATGCCATACCATCGTCTCGAACCACAGGCAACCGAGAGCAGC
AGCTTGCGCGCACGGCCTCGCAGACTGTCGGTGGCCATGTCCGCGGGAGC
AGACGGCGAGGGGGGGGACGGGATGGGCGACGACGCGGACGACGACATGT
CGAGCGCGGTGGCGACAAAACCAAAAAAGAAGTTCAACTCCGAGTTGGAT
GACCTCGTAGGGGAGATGGCGGGGCGGACCAGCGACGAGCCGGTGATCAT
TCCCCGCGGGGCCGGCATCGCGCCCATGGCGCCGGGGCCGATCAAGGCGG
ACCCTATCCCTGGAATGGATGGTGAGGAGGTGTGATATTGCGCAGGTCGT
TGTTGTGTAAGTAGCTGGATCGTTTTTTTGAGTTTTGTGTTTTTTTTCTC
CGCCAGTATGTGGCTCGATGTACTGCTCGACAGCAGAAAGCGGCGCAATA
GGCGGCGACATTGTGTAGCTATTTTTACGCAACATTTCACTGCCCTGCGT
GGTGCGTAACGATCTGGTCTATGAAGAAGGCATGGCCGCCCAACATGTTG
CCCTCGTTCCTGCTGGGGTTTGCTCGTTCAAAACGTTTCTACAGCGATTG
TAGATACTTCGGCCCCCCGTGTTTCACGCTATCTCTCGTCCAAACGGTAA
ATGACGAGTTCTTGTCACGCTATCGTGAGGTGGAAGGACTTAATCGTTAC
TACGTACTTCATGAGGGATAAGCAGGCTAAGACAACACAGTCTACATACA
TATGTGACTGACTGCACCGAGAGCGGCAGCCGCAGTATGATACCGGCGAA
GTAAGGCGGACGAATCAATATTGACGGCAGGCACACCACACCGCATGCGA
CGGTTGTCTACTGGTGCCGTTATCGTGTCATGATACACCACGGTATACTC
ATATTTCTCTCGCGATTGCTCGTTCCCGTGGGCATCGATACCTACCCCGT
GGCGTTGTCGCCGAGGAAAGTCTCCCAGAAAACCGTTCCAACGCCCCTTT
CACGCTTTCGGGCGTTGACACCCTCGCCGACTCTATTGGGGCAATTTTTT
TGTAGCATCTAGAGTCGGTCCAGGCGGCACCGTACGCGAGTTACGGTGGT
GTGTCTCATAGTTTATCAGGAACCTCGTGGGTCCGATACATGAACTAGAT
TTGACGATTCACCTGGCCATAGGGCCAGTCTATTCGACAAGATGCCACAG
CTCTACAACTATCCAACTGACGAAAGGTCACAACCGCCCGCCTACAAACA
TGACGTTCTCGTGTCGATGGTTGCACGTCGTTGCGAACGCGCCGCGCCGA
AAACCGTTGAAATTCCCGACACCATCCCATCCCATCCCATCCCACCCCAC
CCCTGCGCTGTTCTCCCCGCCTTTCTCGCCACCTCTCGTCCTTCCTCGCC
TTGTCTTATATCTTGAATGTTGCGAAAAATATTGACAATAAACCCAAACC
GCTCCCATCTCCGCCCTTTTCTCCCCCACCTCTTGTTTTTCTTGCATGTG
TTGGTACATCGATTTTCAACGACGCACAGACGACGACATCCCCGGCAAGA
TCGTCTTGTCCCCGGAGGTGCTGGCGGAGCAGCAGAAGGGGCTCGAGAAG
ATCGCGCAGCAGCTGAGGAGGGAACGGCTGGACAAGGAGGCGGAGGACGC
GATCACCTTCGGGTTTTGCCCCAGGGCAGAGCTTTGGAACGGAAGGTGTG
TGTGTGTGCGTGCTTTGTTTAGAGAATGCTCTTTGGCACCCACCGCGGTT
GGCATTTTTGCGAAGCAAAAGACGCGTAGCAAGTCCGCCAGTGTTGAATT
GGAGTCTACAGTAGTAATATGCGTGCACAGCGTAGGTCGGATTGTTGCGT
GGTGTGGCTGTGCTTCCATTCACCGACCAACTGACGGATCTTTCCGCAAC
TGCACATGAGACAAGCTGTAGTTTAACGGTGTGTACATCTGGTCAGGCGT
TCTGCATGATGTCTCGAAGTGGAAACAGCTGTGCTTGTACACGAAGCTCG
AGGCTGCGCTCCGCTTGCATTTTGCTGCGGTCGTAGACTAATTTTTTACC
AGAGATGGAGGCGGTTTTTCACCTGGAAAGCAAGACGTGCGGTGTTTGGG
ACGCATTCGGACGCATCGGCACACGCCACGGGACTCTATCGCAAGTGTTT
TTTGGGGTTCGCTAGTTCGCGGCGGCGTTCCTTCTCTAAAGTCACCAACA
CCTGTCTATTCGCCTGTCTTCCATGGCAGGTCCGCGATGTTCGGAATCAC
AGTGGGCATGCTCACCGAGCTTTGGACCGGGCAGAGCATCCCGCAGCAGG
TCGAGACTTTCGCGCAGCTCCTGGGGCTGCTGCCGCTGGACTACGACACC
TACTTCCAGTAGTTCCGTTCCGATTCGCGTGGTCCTCGTCCTGCATGCAC
TCCGGAGAAGTTGAATTTTCATGTTTTAGGTGTACGGAAGGTGAAATCGT
CACATGCAGTAAGTGACCCCTGCGCATGCATCGCATCGCTAGACCACGCA
CGGAGTTGTTCTCCTGTACGATGGAGTGGAGCAGAGTTGTTGTTTTTCAT
GACGATGGATGGATGCTCTGGCTCTGTGGCTCTGTGGTTCTCGTGTCGGA
AGCAGTGCGCTCACCTGCTTTGTTGATCTCTTTCTGCACAGAAAAGTGTC
CTCGATTGCGCGGTTCGTAGTTGTCAAGGGGGCATCTTCTATAGAGTAGC
GGATACGATACCAGTGAACCCTCTAGGGTTTGTGGGGGCATTTGTCTCCG
GGGGACGTTGCTCGAGAGCGAAATAAAGGTTGAAGGTTTCCGCATTGCAT
TGAACAGCATACACGGGATTGGCTGAGAATATGCTGCAGGTATCTAGGTG
TGTCATGTTTCCTTGCTTTCGGTCGGCCAACCTGGCGTAGACGAGGCTGT
CGCCTTGGCGGTGATGACACTCACGGGAAGAGAGCGGTGAACTCGACAGC
GAATGAAGCGGTAGGGCAAGACGTGCCAACTTTTACTTTTACTTTAGGTG
ATGTGACGCACCGTCGGACGTGTAAGGTGTGATGGTCGCAGCTGCTTGTT
GTAGAAAACGCTGCCACCGTCGTTGGGTACGTTTGTTTCATGTGTACTTA
CTTGTTGTCTCGTTGGTTTCAGATGATGCAGTACTGCTGTACTGCTGCTT
TCTCGAGAGTTGGATGATACCGAGTGACTGATGTGCGCGCTAACGTTGTG
ACGGTTTTTTCGTGTCTTGTGTCGGCAAGTGTAGAGCGAGCGGTACATGT
GGTACGATGTGAATGTCCACCAAATAGAAAAGACAACAGGGTTTCGGGAA
TTTTTTTCCCGCCAGCTGCGGAGCGGAGGTAGGTATCTATCTGCTGCAGA
CGAGAAATATCGTTTACCGTTTCAGGTTATTTAGCGCTTGCATCAATTGC
TCTTGTTTCGCATGCCTATCATGACATTCG
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Coding sequence (CDS) from alignment at C-linearis_contig112:171831..176710+

>mRNA_C-linearis_contig112.1520.1 ID=mRNA_C-linearis_contig112.1520.1|Name=mRNA_C-linearis_contig112.1520.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=1440bp|location=Sequence derived from alignment at C-linearis_contig112:171831..176710+ (Chordaria linearis ClinC8C monoicous)
ATGCGTCTTTCGGCAAGCATCGCGATGGGGGTGGGTTGTGTGTCGGTGGT
GCAGGTGTCCTCGTTCGCGTTCGTGCAAGTGCCATTGGGGGCACCAGCAG
GATGCACATCGTGTGTGGGAAGCTCTTATCAACAGGTGGGTTTTCGATGC
GTCTTTCGGCAAGCATCGCGATGGGGGTGGGTTGTGTGTCGGTGGTGCAG
GTGTCCTCGTTCGCGTTCGTGCAAGTGCCATTGGGGGCACCAGCAGGATG
CACATCGTGTGTGGGAAGCTCTTATCAACAGGTGGGTTTTCGCAGCAGCT
TGCGCGCACGGCCTCGCAGACTGTCGGTGGCCATGTCCGCGGGAGCAGAC
GGCGAGGGGGGGGACGGGATGGGCGACGACGCGGACGACGACATGTCGAG
CGCGGTGGCGACAAAACCAAAAAAGAAGTTCAACTCCGAGTTGGATGACC
TCGTAGGGGAGATGGCGGGGCGGACCAGCGACGAGCCGGTGATCATTCCC
CGCGGGGCCGGCATCGCGCCCATGGCGCCGGGGCCGATCAAGGCGGACCC
TATCCCTGGAATGGATGCAGCAGCTTGCGCGCACGGCCTCGCAGACTGTC
GGTGGCCATGTCCGCGGGAGCAGACGGCGAGGGGGGGGACGGGATGGGCG
ACGACGCGGACGACGACATGTCGAGCGCGGTGGCGACAAAACCAAAAAAG
AAGTTCAACTCCGAGTTGGATGACCTCGTAGGGGAGATGGCGGGGCGGAC
CAGCGACGAGCCGGTGATCATTCCCCGCGGGGCCGGCATCGCGCCCATGG
CGCCGGGGCCGATCAAGGCGGACCCTATCCCTGGAATGGATGACGACGAC
ATCCCCGGCAAGATCGTCTTGTCCCCGGAGGTGCTGGCGGAGCAGCAGAA
GGGGCTCGAGAAGATCGCGCAGCAGCTGAGGAGGGAACGGCTGGACAAGG
AGGCGGAGGACGCGATCACCTTCGGGTTTTGCCCCAGGGCAGAGCTTTGG
AACGGAAGACGACGACATCCCCGGCAAGATCGTCTTGTCCCCGGAGGTGC
TGGCGGAGCAGCAGAAGGGGCTCGAGAAGATCGCGCAGCAGCTGAGGAGG
GAACGGCTGGACAAGGAGGCGGAGGACGCGATCACCTTCGGGTTTTGCCC
CAGGGCAGAGCTTTGGAACGGAAGGTCCGCGATGTTCGGAATCACAGTGG
GCATGCTCACCGAGCTTTGGACCGGGCAGAGCATCCCGCAGCAGGTCGAG
ACTTTCGCGCAGCTCCTGGGGCTGCTGCCGCTGGACTACGACACCTACTT
CCAGTAGGTCCGCGATGTTCGGAATCACAGTGGGCATGCTCACCGAGCTT
TGGACCGGGCAGAGCATCCCGCAGCAGGTCGAGACTTTCGCGCAGCTCCT
GGGGCTGCTGCCGCTGGACTACGACACCTACTTCCAGTAG
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