mRNA_C-linearis_contig111.1481.1 (mRNA) Chordaria linearis ClinC8C monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-linearis_contig111.1481.1
Unique NamemRNA_C-linearis_contig111.1481.1
TypemRNA
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Homology
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BLAST of mRNA_C-linearis_contig111.1481.1 vs. uniprot
Match: D7FL74_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FL74_ECTSI)

HSP 1 Score: 379 bits (974), Expect = 5.270e-119
Identity = 186/322 (57.76%), Postives = 229/322 (71.12%), Query Frame = 3 
Query:  165 MRSTRGSSSRTPPKWIITAVSYGVVALCCGWAGHYYHAIAGRTG-ANPVGFAATETEXXXXXXXXVEAREGAAATAEAVRDGHTSRPPWDPLGCQTIVFFHVPKTGGESMNELWFNMPGDERVSWWKKGYMTTSLRNTGLQPKKQEEFLKSMKPWAREAPIQRHKVVEFHCGDALSFMQAREVLDVMRAEHEKNDCGFFAFTLIRSPLDWIVSLYDDICHRRLRGHKDTCPH--IAKPKEAMLEFPHRDGIVSYMAHGFKGWDSPGPVDDETVEDVVASLRSHLDLVALTEDVPRVRRYLTKRFAAPNGELSPQVGAALDRG 1121
            MR  RG++  +    +I A+S G VAL CGWAG+ YHA+  R+   N  G    +T          +     AA   +     TSR PWDP GCQTI+FFH+PKTGGES+N+L    PG   + WWK  Y  +S R TGL+  +Q+  LKSMKPW +E+P QRHK++EFHCGDALSFMQARE L+ MR EH KNDCGFFAFT++R PL+W+VSLYDD+CHRRLRGHKDTCP      PK+ ML +PHRDG+VSY+AHGFKGW SPGPVD+ TVE+++ S   HLDLVALT +VP++RRYLTKRF AP+G L+PQV  ALDRG
Sbjct:    1 MRPDRGANGWSRRSGLIRALSCGAVALTCGWAGYSYHAMIQRSSKTNGNG----KTLVLRAQEPTADKSGAPAAPVSSGEGATTSRAPWDPQGCQTILFFHIPKTGGESINQL---RPG---IQWWKSAYDWSSFRITGLELTEQKNHLKSMKPWLKESPSQRHKLIEFHCGDALSFMQAREALETMRHEHAKNDCGFFAFTMVRPPLEWLVSLYDDLCHRRLRGHKDTCPQQDSMTPKQEMLAYPHRDGLVSYLAHGFKGWASPGPVDEGTVEEMLESFGRHLDLVALTSEVPQIRRYLTKRFVAPHGVLTPQVEDALDRG 312
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BLAST of mRNA_C-linearis_contig111.1481.1 vs. uniprot
Match: A0A6H5J9V3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9V3_9PHAE)

HSP 1 Score: 322 bits (825), Expect = 6.400e-99
Identity = 146/210 (69.52%), Postives = 172/210 (81.90%), Query Frame = 3 
Query:  618 KPWAREAPIQRHKVVEFHCGDALSFMQAREVLDVMRAEHEKNDCGFFAFTLIRSPLDWIVSLYDDICHRRLRGHKDTCPHIA----KPKEAMLEFPHRDGIVSYMAHGFKGWDSPGPVDDETVEDVVASLRSHLDLVALTEDVPRVRRYLTKRFAAPNGELSPQVGAALDRGSLQNANNIKTIRVGDFDAAELEQLNSTIQLDWKLYDAV 1235
            KPW +E+P  RHK++EFHCGDALS MQARE L+ MR EH KNDCGFFAFT++R PL+W+VSLYDD+CHRRLRGHKDTCP  A     PK+ ML +PHRDG+VSY+AHGF GW SPGPVD+ TVE+++ S   HLDLVALT +VP++RRYLTKRF AP+G L+PQV  AL RG LQNAN +KTIR+ DFD  EL QLNSTIQLDW LY+AV
Sbjct:    9 KPWLKESPSHRHKLIEFHCGDALSLMQAREALETMRHEHAKNDCGFFAFTMVRPPLEWLVSLYDDLCHRRLRGHKDTCPQQAGDSMTPKQEMLAYPHRDGLVSYLAHGFNGWASPGPVDEGTVEEILESFGRHLDLVALTSEVPQIRRYLTKRFVAPHGVLTPQVEDALHRGELQNANKVKTIRLSDFDPDELAQLNSTIQLDWMLYEAV 218
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BLAST of mRNA_C-linearis_contig111.1481.1 vs. uniprot
Match: D7G147_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G147_ECTSI)

HSP 1 Score: 321 bits (823), Expect = 1.640e-98
Identity = 143/211 (67.77%), Postives = 175/211 (82.94%), Query Frame = 3 
Query:  612 SMKPWAREAPIQRHKVVEFHCGDALSFMQAREVLDVMRAEHEKNDCGFFAFTLIRSPLDWIVSLYDDICHRRLRGHKDTCP--HIAKPKEAMLEFPHRDGIVSYMAHGFKGWDSPGPVDDETVEDVVASLRSHLDLVALTEDVPRVRRYLTKRFAAPNGELSPQVGAALDRGSLQNANNIKTIRVGDFDAAELEQLNSTIQLDWKLYDAVL 1238
            ++KPW +E+P QRHK++EFHCGDALSFMQARE L+ MR EH KNDCGFFAFT++R PL+W+VSLYDD+CHRRL+GHK+TCP  +   PK+ ML +PHRDG+VSY+AHGF GW SPG VD+ TVE+++ S   HLDLVALT +VP++RRYLT+RF AP+G L+PQV   LDRG LQNAN +KTIR+ DFD  EL QLNSTIQLDW LY+ VL
Sbjct:   17 TLKPWLQESPSQRHKLIEFHCGDALSFMQAREALETMRHEHAKNDCGFFAFTMVRQPLEWLVSLYDDLCHRRLKGHKETCPQQNSMTPKQEMLAYPHRDGLVSYLAHGFNGWASPGSVDERTVEEILESFGRHLDLVALTSEVPQIRRYLTRRFVAPHGVLTPQVEDNLDRGELQNANKVKTIRLSDFDPDELAQLNSTIQLDWMLYEGVL 227
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BLAST of mRNA_C-linearis_contig111.1481.1 vs. uniprot
Match: A0A6H5K7U3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7U3_9PHAE)

HSP 1 Score: 111 bits (277), Expect = 9.100e-25
Identity = 66/152 (43.42%), Postives = 84/152 (55.26%), Query Frame = 3 
Query:  165 MRSTRGSSSRTPPKWIITAVSYGVVALCCGWAGHYYHAIAGRTGANPVGFAATETEXXXXXXXXVEAREGAAATAEAVRDGHT-SRPPWDPLGCQTIVFFHVPKTGGESMNELWFNMPGDERVSWWKKGYMTTSLRNTGLQPKKQEEFLKSM 617
            MR  RG++  +    +I A+S G VAL CGWAGH YHA+  R+  +                    A+ G  A   +  +G T SR PWDP GCQTI+FFH+PKTGGES+N+L    PG   V WWK  Y  +S R TGL+  +Q   LKSM
Sbjct:    1 MRPDRGANGWSRRSGLIRALSCGTVALTCGWAGHSYHAMIQRSSKS------NGKNLLLRVQEPTIAKSGEPAAPVSSGEGATTSRAPWDPQGCQTILFFHIPKTGGESINQL---RPG---VPWWKSAYDWSSFRITGLELTEQTNHLKSM 140
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BLAST of mRNA_C-linearis_contig111.1481.1 vs. uniprot
Match: K0TC92_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0TC92_THAOC)

HSP 1 Score: 66.6 bits (161), Expect = 1.190e-7
Identity = 61/238 (25.63%), Postives = 103/238 (43.28%), Query Frame = 3 
Query:  390 EAVRDGHTSRPPWDPLGCQTIVFFHVPKTGGESMNELW--FNMPGDERVSWWKKGYMTTSLRNTGLQ-PKKQEE-FLKSMKPWAREAPIQRHKVVEFHCGDALSFMQAREVLDVMRAEHEKNDCGFFAFTLIRSPLDWIVSLYDDICHRRLRGHKDTCPHIAKPKEAMLEFPHRDGIVSYMAHGF----------------KGWDSPGPVD-DETVEDVVASLRSHLDLVALTEDVPR 1040
            +A  D  T   P  P  C  + F+H+P TGG S+N  +  FN P    VS+++   + T    T  + P++ E+ F + M    +       ++   H  D     ++ ++L++ R+E E  +C F +  +IR PL+  +SL     H+ ++    T    AK     LE P + G+ + +   F                 G  +P  V  +E V   +  L  H D+V +T DV R
Sbjct:  101 KATNDRSTIPRPHTPYKCGVVWFYHIPCTGGSSINRWFRKFNSPQYGNVSYYQNWALETLKDGTFCKNPQRVEDKFAEGMLKHVQNLAPTEWRIAHSHLVD-FYLNESEDLLNLWRSEVEAQNCEFISSIMIRDPLNHALSL-----HKIIKSKNSTQEEWAKH----LESPTKQGLWATVLDFFLYNNQGNRQRPNYPRNPGGRNPFNVSKEEKVARAMELLARHFDIVTMTHDVFR 328
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig111.1481.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D7FL74_ECTSI5.270e-11957.76Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5J9V3_9PHAE6.400e-9969.52Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G147_ECTSI1.640e-9867.77Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K7U3_9PHAE9.100e-2543.42Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
K0TC92_THAOC1.190e-725.63Uncharacterized protein n=1 Tax=Thalassiosira ocea... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig111contigC-linearis_contig111:51273..57787 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score67.0
Seed ortholog evalue2.1e-08
Seed eggNOG ortholog159749.K0TC92
Hectar predicted targeting categoryother localisation
EggNOG OGs2CG5G@1,2T8BC@2759,2XGGQ@2836
Best tax levelBacillariophyta
Best eggNOG OGNA|NA|NA
Exons7
Model size3405
Cds size1113
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927480.7163131-UTR-C-linearis_contig111:51272..514361622927480.7163131-UTR-C-linearis_contig111:51272..51436Chordaria linearis ClinC8C monoicousUTRC-linearis_contig111 51273..51436 +
1690879725.2760713-UTR-C-linearis_contig111:51272..514361690879725.2760713-UTR-C-linearis_contig111:51272..51436Chordaria linearis ClinC8C monoicousUTRC-linearis_contig111 51273..51436 +
1622927480.8183544-UTR-C-linearis_contig111:55659..577871622927480.8183544-UTR-C-linearis_contig111:55659..57787Chordaria linearis ClinC8C monoicousUTRC-linearis_contig111 55660..57787 +
1690879725.363864-UTR-C-linearis_contig111:55659..577871690879725.363864-UTR-C-linearis_contig111:55659..57787Chordaria linearis ClinC8C monoicousUTRC-linearis_contig111 55660..57787 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927480.7303472-CDS-C-linearis_contig111:51436..517701622927480.7303472-CDS-C-linearis_contig111:51436..51770Chordaria linearis ClinC8C monoicousCDSC-linearis_contig111 51437..51770 +
1690879725.2857027-CDS-C-linearis_contig111:51436..517701690879725.2857027-CDS-C-linearis_contig111:51436..51770Chordaria linearis ClinC8C monoicousCDSC-linearis_contig111 51437..51770 +
1622927480.74436-CDS-C-linearis_contig111:51988..521061622927480.74436-CDS-C-linearis_contig111:51988..52106Chordaria linearis ClinC8C monoicousCDSC-linearis_contig111 51989..52106 +
1690879725.2937856-CDS-C-linearis_contig111:51988..521061690879725.2937856-CDS-C-linearis_contig111:51988..52106Chordaria linearis ClinC8C monoicousCDSC-linearis_contig111 51989..52106 +
1622927480.7580144-CDS-C-linearis_contig111:53522..535941622927480.7580144-CDS-C-linearis_contig111:53522..53594Chordaria linearis ClinC8C monoicousCDSC-linearis_contig111 53523..53594 +
1690879725.3039033-CDS-C-linearis_contig111:53522..535941690879725.3039033-CDS-C-linearis_contig111:53522..53594Chordaria linearis ClinC8C monoicousCDSC-linearis_contig111 53523..53594 +
1622927480.768574-CDS-C-linearis_contig111:53739..539111622927480.768574-CDS-C-linearis_contig111:53739..53911Chordaria linearis ClinC8C monoicousCDSC-linearis_contig111 53740..53911 +
1690879725.3137507-CDS-C-linearis_contig111:53739..539111690879725.3137507-CDS-C-linearis_contig111:53739..53911Chordaria linearis ClinC8C monoicousCDSC-linearis_contig111 53740..53911 +
1622927480.7791016-CDS-C-linearis_contig111:54543..546601622927480.7791016-CDS-C-linearis_contig111:54543..54660Chordaria linearis ClinC8C monoicousCDSC-linearis_contig111 54544..54660 +
1690879725.3269289-CDS-C-linearis_contig111:54543..546601690879725.3269289-CDS-C-linearis_contig111:54543..54660Chordaria linearis ClinC8C monoicousCDSC-linearis_contig111 54544..54660 +
1622927480.7894328-CDS-C-linearis_contig111:55068..552151622927480.7894328-CDS-C-linearis_contig111:55068..55215Chordaria linearis ClinC8C monoicousCDSC-linearis_contig111 55069..55215 +
1690879725.3423142-CDS-C-linearis_contig111:55068..552151690879725.3423142-CDS-C-linearis_contig111:55068..55215Chordaria linearis ClinC8C monoicousCDSC-linearis_contig111 55069..55215 +
1622927480.80358-CDS-C-linearis_contig111:55506..556591622927480.80358-CDS-C-linearis_contig111:55506..55659Chordaria linearis ClinC8C monoicousCDSC-linearis_contig111 55507..55659 +
1690879725.3553696-CDS-C-linearis_contig111:55506..556591690879725.3553696-CDS-C-linearis_contig111:55506..55659Chordaria linearis ClinC8C monoicousCDSC-linearis_contig111 55507..55659 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig111.1481.1prot_C-linearis_contig111.1481.1Chordaria linearis ClinC8C monoicouspolypeptideC-linearis_contig111 51437..55659 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-linearis_contig111.1481.1

>prot_C-linearis_contig111.1481.1 ID=prot_C-linearis_contig111.1481.1|Name=mRNA_C-linearis_contig111.1481.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=371bp
MRSTRGSSSRTPPKWIITAVSYGVVALCCGWAGHYYHAIAGRTGANPVGF
AATETETAAAAAAAVEAREGAAATAEAVRDGHTSRPPWDPLGCQTIVFFH
VPKTGGESMNELWFNMPGDERVSWWKKGYMTTSLRNTGLQPKKQEEFLKS
MKPWAREAPIQRHKVVEFHCGDALSFMQAREVLDVMRAEHEKNDCGFFAF
TLIRSPLDWIVSLYDDICHRRLRGHKDTCPHIAKPKEAMLEFPHRDGIVS
YMAHGFKGWDSPGPVDDETVEDVVASLRSHLDLVALTEDVPRVRRYLTKR
FAAPNGELSPQVGAALDRGSLQNANNIKTIRVGDFDAAELEQLNSTIQLD
WKLYDAVLGDASQQVDLGRF*
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mRNA from alignment at C-linearis_contig111:51273..57787+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-linearis_contig111.1481.1 ID=mRNA_C-linearis_contig111.1481.1|Name=mRNA_C-linearis_contig111.1481.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=6515bp|location=Sequence derived from alignment at C-linearis_contig111:51273..57787+ (Chordaria linearis ClinC8C monoicous)
CACGGAGCTTGACATAATAAAGCGTAGCGCTACGCTACATACGTGTCACC
TTCCATAGACGAAGCCAGCTGGGGGGTGGACATTCCCGAAAGTGCGGAGA
ACTGCCGTGCAGCCGCCCTTCTCGGGGTGTGCGGGGGTTTGGTTCCCTTT
TGCTTACCTCCACGATGAGATCTACCCGCGGGTCAAGTAGTCGGACCCCT
CCGAAATGGATCATCACTGCCGTGAGCTACGGAGTCGTAGCACTATGCTG
TGGCTGGGCCGGCCATTACTACCACGCCATCGCCGGACGAACAGGCGCGA
ACCCCGTGGGCTTTGCTGCCACAGAAACAGAGACAGCAGCAGCAGCAGCA
GCAGCTGTGGAGGCAAGAGAAGGAGCAGCGGCTACGGCAGAGGCGGTGCG
GGATGGGCACACAAGCCGACCGCCTTGGGACCCGTTGGGATGCCAGACAA
TAGTGTTTTTTCACGTCCCAAAGACGGGTGGAGAAAGCATGAACGAGTGT
GAGTGGCCTACAAGATAACACACATACAGAAGCTACAGCAGTAGGTCGCT
CCCAAACGAAGGCTACACATACGGCATCGTCCGGGTTGGTTGTTGCTCCG
CATAAAAAATTCGGGGTGTAAGCAGCAACACAAGATGACACATTCCCCGA
ACAATTGTAAACTGAAATACTCGCCTGCTCCGTACTACTGTATGTATGTA
TCTTGTGCTTTCACAGTGTGGTTCAACATGCCTGGTGATGAGCGGGTGTC
GTGGTGGAAGAAGGGCTACATGACGACGTCCTTGAGGAACACCGGCCTCC
AGCCGAAGAAGCAGGAGGAGTTCTTGAAGAGCATGTAAGGATGATGCACT
TTCTGATGAGTTACGTTTTGTGGGATGAATGTTCCGATAACATCACTGCC
TCCGCACCTGCATTGTACTAACACACACCTCGCTGCGTGAGAGTTCGGCG
CCCGGGAATCTGCCCTCGAGGGCAGATGCGAAAACGCGTGCCCTCAACAC
GGTACAACATTGTTCTTGGAGGTACACTTCAAAGAATGCACTGCAGGTTT
CCGGCCGTCAGGCTAGTTTCACAGTGGTTAGGCTCAACCCTAAACCCTAA
CCCTCACCCTAACCCTCACCCAACCACCCAAGCTAGGTTGGAGTGCATTG
GTTAGGCTCTAGGTCGCTGTAACCGGTCAAACAGCTTGAAGGCATGTGTT
TCCCATCTACCCTCGAGGGCAGATTCCGGGGCACCGGGGTGGGGTGATAG
GGGGTCCTGTCTTGCGGTCGTTTGGGTGAAGTTCGTCCGGCCTCTGTCCA
AAACATGTATCTTAAGATATTGTAGCTGTCGCTAGAACGAGCGACAGCTG
ATAGAAGTAACTATCGTCAGATGGGAGTGCTGAACCCTGCTCGCGATAAA
AAACATCAAAGGCATGCACCGCCGGAGGTAGGTGGAGACATCCCCCCCCC
CTGTGTGACCCCGGATGGTAACCTAGCTAGTTGTAGTGAAGAGCAGGAGG
CAGGCTACGAAAAAACATTGAAGGGTGAGTAAAAAAAAAAGCTCTTGTAC
AGCGGCGTGCGAACTAGGATACAGACGTTTGGAGCCCGGGATATAGATGC
TGGCAATTCCCTCGTCAACAACGAAGTCGAAAGTACTAACAAGCTAGGCA
GCAAGTTTTCAATGTACCAGGAACGAAAGTGAAAAAAACCCTCACTTCGT
CGGGGCTCGAACCCATGACCTGGTGCTGAGGAGACTGCGTGGGTACCTAC
TAGACCACCGGGGCAATGTCCACAGGCCACTGCTGTATTTGGGAAGTGCT
AAGGCTCGGTTTTGCACTGGCGCCTCCGCTAACCCTGTTGCTGACCAAGC
GGGCACGCCATGGCGCCCAGGTGGTAGAGACTCGTAGGTCGCTGTGCATG
GGTAATACTTGGTATAGGCTCTTCGCATACGTCGCGGAGCATGCTAACTG
TAGGTTCGCTCCTGCTAGGTCGAGACTGACCGCCGGAATGGCGGCGGGCG
ATACACCCGGCTTGGGCCGGGCATTACTCGCATGCTGCTACTCCCTCTCT
TCCTCGGTGCCTAACCTATCATAGCGTCATAGCGGCATGGCGCACCCGTT
GCCAAGTCGTCCTGGCAAAGGGGAGCTTGACCTGCGACGAGGTGATAGTG
GCGTCCCAAAAGGAGCGAAGCTTTCCATCGCAAAATGATCCCTCGATCGG
ATGATCTGACCGTGTCTCATGTCTTTGATGCGTCTTTCATGTGTGTTTAG
GAAGCCGTGGGCGAGAGAGGCTCCTATCCAGCGCCACAAGGTGGTCGAGT
TTCACTGCGGGGATGCTCTCAGGCAAGTGCTGCATCAGCAAGGAGGAAGG
ACAGCAGTTGCCGTGCGTTTTTGCGCGGCGGGAATAACCGTTTCTCCTCG
TCGCCCTCGTCTCGCAAATAGATAACTTAATCCACCGCCCTGCGCTACCC
TCCTCTCCACCAATCAGCTTCATGCAGGCGAGGGAGGTGCTGGACGTGAT
GCGAGCGGAACACGAGAAGAACGACTGCGGCTTCTTCGCCTTCACCTTGA
TCAGGTCGCCGCTGGACTGGATCGTGTCGCTGTACGACGACATCTGCCAC
AGGAGGCTGAGGGGGCACAAGGACACGTGCCCACACATAGTGAGTGGAGC
GGTGGTAAGGGCAGGATGGGTGGCCCGGTTAGATTCGCGGTGGTCGGGGT
GTTCGAATGGTGGTGAGGTCGGTTGTTGGTGGTAAATGGAGGTGAGCATC
GTTGGTGGTATTTTCGTATTTTCTGGCTGGTCGTGAAGTTTGGCGGTGCT
TTTGGTTTGATGGCGATCGTAATCGGGATCGTGGTCGTGGCGCGCGTGTT
TTTGTTGTCAAAGTGGCGACGCGGGCGTGGCATCTGCTGGTGTTTTATCG
GAGCGTTTTGCGATGGGTGCGGCACGATTTGCCACCCCTGCACCATCGTA
CCTAGCTGTTTTTTGTTTCTCGTCTCGCCGCCTCTGTAAATACTACCAGT
ACTTCGTTTTACTAATACTATTACTATTATAATGCTATTTCTAATACATA
CGAAGTATTACTATTACTTATACTACTACTACTAATAATAATAATAATAA
TAATAATAATACGAATGCTATAAGTGGTACTATATACTACACCGATCTAT
AACTACTACGGTACTGAATACAACGCTTTCGGTCTTCTTTTTGTTATTTT
CGGCGTTGGCCGGGGTCCCGTCAATGCTTTGTTTTTTTCTTTGTTTCTTT
CTTTGTTGTTTCTGTCGTCAGGCGAAGCCAAAAGAAGCGATGCTGGAGTT
TCCCCACAGGGACGGCATAGTCTCGTACATGGCGCACGGCTTCAAGGGCT
GGGACTCGCCTGGACCGGTAGATGACGAGACCGTAGAGGTGTGTTGTGCG
CATCTTGTGTCTCTTGTGCATATATGGGTGCGCGCCATTAACTTGGGAGG
CTTGAGGCGGTGGTTGTTCGATGGACGCTCGAGTCTTTTCAGGGGTCGTC
AAGCAACAAGTGTATGAAATTGGGCCGTGAAGATGATATGTTGTCGTTTT
CTTTCGAAAAGGTACATGCCGTGTGCACTTTGCCTTGTTCACGAAAAAGG
TGTTGCCGTGCCCGTGCCCGTGCCCGTGACCGTGACCGTGACCGTGACCG
TGACCTTGTCGGTGCTGTCTGCGCAAGGATGCAGGTTTTTCGGCGTCTCC
TGTGTTCTTCTGTTCACACGGTACCGACCTGCGCTGCCTTCTCTTGACGC
CGCTGTATGTCGTATGCTTGTGCCTTTTGTATGCGTTGCTCCGCAGGACG
TGGTCGCCTCGTTACGGAGTCATTTGGACCTCGTGGCCTTGACGGAAGAC
GTCCCACGGGTACGAAGGTACCTCACCAAGCGCTTCGCGGCGCCCAACGG
CGAGCTTTCGCCACAGGTTGGAGCTGCTCTCGACCGAGGATCGGTGAGTT
TGGCTGCAGAGCGGAGGGTCCCTGTGGCTGGTTTCACATCATAAGTGTAC
CCTGCACACGTGCAAACTGCTGCAGATAACGAGCTCAGCGACAAAGACCA
GCAATTCAGAGGGACGCACCCGGAAAACGTTTTTTTTGTCGCGTCTGTTT
CGCATCCGAAGGATGAAACGCTCAAAAGTAACCCGCTTCCCGTTACCCCC
CCCGGATCGCTCGGTCTCTTGTTGTTCTGTTTGGTCGTGTTTTTCTGTTT
CCTCGTCTTGGTCTTTTCATATTTTCATTGTCAGTTGCAAAACGCCAACA
ATATCAAGACAATACGGGTGGGCGATTTTGACGCGGCGGAGCTGGAGCAG
CTCAATTCCACCATCCAGCTGGACTGGAAGCTGTACGACGCGGTGTTGGG
TGACGCATCCCAACAGGTTGACTTAGGGCGGTTCTGAGACCACGGCACCA
CCACCACCACCAGCAAAAGCAACAGCAACAGCATGACAAGACGAAGCATC
CCAGACAACACCCGGTGAGGTGTAACGGCAAACAAACCAGGAACGGACGC
CATTGTAGAACCGACGAGGGGAGGAGTGTCCACATATTTTGTTTGGGGAG
GGGGGGCGACCACAGCAAGCAGAGCGGCTACACTCCACATTGCAAGCATT
TGCATGGGCTGCTGGTCATGAGAGGGACAAGTGCTCGCAGGAGCGCCGTT
AGCAACGATCCTCCGGCGGGTATTCGTCAGCTTTTGTTATCTCCGCCCAC
GCGATGCTCGCACTGCGGGATGCGGTCGCTTTATTTCGCGGTACAGCTCG
GTGGCTCGGTGGCTCTTCTCACCGTATTTGTAGCAGACCGGCCGTGGATT
TTCCCGCAGCCGTTGCTCCCCCGCTTGCCGCCGCCGCCGCCGCCGCCGGT
GTCGTCGGGGCCGGCCGCTTCCGCTGCCGCTGCCATCAGGGTCGCGGTTC
CTGGAATCTCCGATCGTGGCAGCGGCCTACGGCGGCAGCAGCGGGCGAAG
TGTGTGACTGCTGTGCGTTGTGTGTGCTTGTAGGGTGCCGTGTCTCGCGG
AATAATTTTCTTTCCTTCGTGTGTGGAGGCCACAATATTGCATATTTTTC
CACCTGAAGATACGCCCAAAGAGAGAGAGAAAAGGTGCCCGCAGTTTTCT
GATTGGCCAATTTTTTGAAAGGAAATTTTGTTCGGCCGCCTGTTTGAAAG
GATAAAATCACATTTTCAATTGACCAAAATCCTTTGAAAGGAGACGATTT
TTGTGTTGACGCAAAAAGCTGCCGGCGTTTGTTTTTTGGGTCGATTTTTT
GGAGGGTCGTTCCGAAGAAAGACGAAAAATCCCCGATCGACCGGTGACGA
CGTCACTCACGCGATGTATTTTTTTTTTTTAATCAAGCTACCAAATCGCC
CGTGGATGATTGATCGATTGATCGATTGATTGATTGGTGACCGTACTCAT
TCGGGGAATCGCCAACCACACGGGCGGACGGATACATATACATACATGCG
TGCCTTCAACTTTCGAACCGCGCCCCATCGATGGCGTGTAATATTAGTTT
TCTTGTACGTGCGTGCGAATTCGAAGAGTATTCAATATCCTGGCCTCCAC
ATTACCAGCTTCTCCGGTTCTCGGGACTGAGGGCGCGGGTAACGCAGAAG
TTACTGTAGGTAACCTCGTGATGTATGGCGTATTCCTAGAATGAATTTCG
TGGGCAACGTCCGTGTGATGTGCGGTGAAACTGCTGGGCATACTGGCCTG
TCTGCTGAAGTTTCCAGTGGTGGTCGTGAAAATCACGTTCGTGCGGTGGT
TTATTTTGTGATGGGTTGATATGGTTATTTTTGTTCGGACCCATTTAGTT
TTCCATCGTATCCCTAATCATGCCGGTTCGTGCCCCGGTGCGAGTTGTTT
GTGTGCGGCCATAATTAGTATGACGTGGTTCGTGTTGCATGGTCTACGTC
GCTATTCGGGGCCTCCGTCGTGTTGTATTGTTGTCTCGATTTTGTTTCCA
GCTTGTTTGGCCTTAATTTAAGCACGGGGGAGAAACTTTTTTGTTTTCTG
TCAGTTGAGGCTCATCCCGGTGCGTTTTTTGTTGATGCCTATTTCAATCT
TGGAATACCTTCTGTCTTCGCCACGAGCATGGCGTGTGGACTATTTACAG
GACGCTTTTTGATGTGAAGAAATCGAATCGCGATTTCTGCCTATTTAATA
GAAATGTAAATGTCATAACTTCTGGGCCTGGTTTTGTTGTAACGCTTGTT
TGTTGGACGTTTCTCATTCAGCAGCCTACCAGACGTCGTATGTTTACACA
AATTTCCAGTAGGGTTTGAGATTTCCAGTGGATAGATACGGTACTGCGCA
TAGCACAGCAAAAACCATCATACTAAGTATTATGTTGTCGGGTTTCGAGA
TAGCTCCTGAATAGGAGAGTTCGCCTTGTATGTTAGTCTAAGTCTAAAAT
ATAACTGTTGCCTTGTTGTAGTTTTTTCTCAATTTCTTGCTCTCGTCACA
CGCACCAAAGAGAGTGCCACCGGTGTGTGCTCAACAAGGGTGTCAGCAAA
ACGTTTATGTTACTC
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Coding sequence (CDS) from alignment at C-linearis_contig111:51273..57787+

>mRNA_C-linearis_contig111.1481.1 ID=mRNA_C-linearis_contig111.1481.1|Name=mRNA_C-linearis_contig111.1481.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=2226bp|location=Sequence derived from alignment at C-linearis_contig111:51273..57787+ (Chordaria linearis ClinC8C monoicous)
ATGAGATCTACCCGCGGGTCAAGTAGTCGGACCCCTCCGAAATGGATCAT
CACTGCCGTGAGCTACGGAGTCGTAGCACTATGCTGTGGCTGGGCCGGCC
ATTACTACCACGCCATCGCCGGACGAACAGGCGCGAACCCCGTGGGCTTT
GCTGCCACAGAAACAGAGACAGCAGCAGCAGCAGCAGCAGCTGTGGAGGC
AAGAGAAGGAGCAGCGGCTACGGCAGAGGCGGTGCGGGATGGGCACACAA
GCCGACCGCCTTGGGACCCGTTGGGATGCCAGACAATAGTGTTTTTTCAC
GTCCCAAAGACGGGTGGAGAAAGCATGAACGAGTATGAGATCTACCCGCG
GGTCAAGTAGTCGGACCCCTCCGAAATGGATCATCACTGCCGTGAGCTAC
GGAGTCGTAGCACTATGCTGTGGCTGGGCCGGCCATTACTACCACGCCAT
CGCCGGACGAACAGGCGCGAACCCCGTGGGCTTTGCTGCCACAGAAACAG
AGACAGCAGCAGCAGCAGCAGCAGCTGTGGAGGCAAGAGAAGGAGCAGCG
GCTACGGCAGAGGCGGTGCGGGATGGGCACACAAGCCGACCGCCTTGGGA
CCCGTTGGGATGCCAGACAATAGTGTTTTTTCACGTCCCAAAGACGGGTG
GAGAAAGCATGAACGAGTTGTGGTTCAACATGCCTGGTGATGAGCGGGTG
TCGTGGTGGAAGAAGGGCTACATGACGACGTCCTTGAGGAACACCGGCCT
CCAGCCGAAGAAGCAGGAGGAGTTCTTGAAGAGCATTGTGGTTCAACATG
CCTGGTGATGAGCGGGTGTCGTGGTGGAAGAAGGGCTACATGACGACGTC
CTTGAGGAACACCGGCCTCCAGCCGAAGAAGCAGGAGGAGTTCTTGAAGA
GCATGAAGCCGTGGGCGAGAGAGGCTCCTATCCAGCGCCACAAGGTGGTC
GAGTTTCACTGCGGGGATGCTCTCAGGAAGCCGTGGGCGAGAGAGGCTCC
TATCCAGCGCCACAAGGTGGTCGAGTTTCACTGCGGGGATGCTCTCAGCT
TCATGCAGGCGAGGGAGGTGCTGGACGTGATGCGAGCGGAACACGAGAAG
AACGACTGCGGCTTCTTCGCCTTCACCTTGATCAGGTCGCCGCTGGACTG
GATCGTGTCGCTGTACGACGACATCTGCCACAGGAGGCTGAGGGGGCACA
AGGACACGTGCCCACACATACTTCATGCAGGCGAGGGAGGTGCTGGACGT
GATGCGAGCGGAACACGAGAAGAACGACTGCGGCTTCTTCGCCTTCACCT
TGATCAGGTCGCCGCTGGACTGGATCGTGTCGCTGTACGACGACATCTGC
CACAGGAGGCTGAGGGGGCACAAGGACACGTGCCCACACATAGCGAAGCC
AAAAGAAGCGATGCTGGAGTTTCCCCACAGGGACGGCATAGTCTCGTACA
TGGCGCACGGCTTCAAGGGCTGGGACTCGCCTGGACCGGTAGATGACGAG
ACCGTAGAGGCGAAGCCAAAAGAAGCGATGCTGGAGTTTCCCCACAGGGA
CGGCATAGTCTCGTACATGGCGCACGGCTTCAAGGGCTGGGACTCGCCTG
GACCGGTAGATGACGAGACCGTAGAGGACGTGGTCGCCTCGTTACGGAGT
CATTTGGACCTCGTGGCCTTGACGGAAGACGTCCCACGGGTACGAAGGTA
CCTCACCAAGCGCTTCGCGGCGCCCAACGGCGAGCTTTCGCCACAGGTTG
GAGCTGCTCTCGACCGAGGATCGGACGTGGTCGCCTCGTTACGGAGTCAT
TTGGACCTCGTGGCCTTGACGGAAGACGTCCCACGGGTACGAAGGTACCT
CACCAAGCGCTTCGCGGCGCCCAACGGCGAGCTTTCGCCACAGGTTGGAG
CTGCTCTCGACCGAGGATCGTTGCAAAACGCCAACAATATCAAGACAATA
CGGGTGGGCGATTTTGACGCGGCGGAGCTGGAGCAGCTCAATTCCACCAT
CCAGCTGGACTGGAAGCTGTACGACGCGGTGTTGGGTGACGCATCCCAAC
AGGTTGACTTAGGGCGGTTCTGATTGCAAAACGCCAACAATATCAAGACA
ATACGGGTGGGCGATTTTGACGCGGCGGAGCTGGAGCAGCTCAATTCCAC
CATCCAGCTGGACTGGAAGCTGTACGACGCGGTGTTGGGTGACGCATCCC
AACAGGTTGACTTAGGGCGGTTCTGA
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