prot_C-linearis_contig111.1481.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig111.1481.1
Unique Nameprot_C-linearis_contig111.1481.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length371
Homology
BLAST of mRNA_C-linearis_contig111.1481.1 vs. uniprot
Match: D7FL74_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FL74_ECTSI)

HSP 1 Score: 379 bits (974), Expect = 4.650e-128
Identity = 186/322 (57.76%), Postives = 229/322 (71.12%), Query Frame = 0
Query:    1 MRSTRGSSSRTPPKWIITAVSYGVVALCCGWAGHYYHAIAGRTG-ANPVGFAATETEXXXXXXXXVEAREGAAATAEAVRDGHTSRPPWDPLGCQTIVFFHVPKTGGESMNELWFNMPGDERVSWWKKGYMTTSLRNTGLQPKKQEEFLKSMKPWAREAPIQRHKVVEFHCGDALSFMQAREVLDVMRAEHEKNDCGFFAFTLIRSPLDWIVSLYDDICHRRLRGHKDTCPH--IAKPKEAMLEFPHRDGIVSYMAHGFKGWDSPGPVDDETVEDVVASLRSHLDLVALTEDVPRVRRYLTKRFAAPNGELSPQVGAALDRG 319
            MR  RG++  +    +I A+S G VAL CGWAG+ YHA+  R+   N  G    +T          +     AA   +     TSR PWDP GCQTI+FFH+PKTGGES+N+L    PG   + WWK  Y  +S R TGL+  +Q+  LKSMKPW +E+P QRHK++EFHCGDALSFMQARE L+ MR EH KNDCGFFAFT++R PL+W+VSLYDD+CHRRLRGHKDTCP      PK+ ML +PHRDG+VSY+AHGFKGW SPGPVD+ TVE+++ S   HLDLVALT +VP++RRYLTKRF AP+G L+PQV  ALDRG
Sbjct:    1 MRPDRGANGWSRRSGLIRALSCGAVALTCGWAGYSYHAMIQRSSKTNGNG----KTLVLRAQEPTADKSGAPAAPVSSGEGATTSRAPWDPQGCQTILFFHIPKTGGESINQL---RPG---IQWWKSAYDWSSFRITGLELTEQKNHLKSMKPWLKESPSQRHKLIEFHCGDALSFMQAREALETMRHEHAKNDCGFFAFTMVRPPLEWLVSLYDDLCHRRLRGHKDTCPQQDSMTPKQEMLAYPHRDGLVSYLAHGFKGWASPGPVDEGTVEEMLESFGRHLDLVALTSEVPQIRRYLTKRFVAPHGVLTPQVEDALDRG 312          
BLAST of mRNA_C-linearis_contig111.1481.1 vs. uniprot
Match: A0A6H5J9V3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9V3_9PHAE)

HSP 1 Score: 322 bits (825), Expect = 5.780e-107
Identity = 146/210 (69.52%), Postives = 172/210 (81.90%), Query Frame = 0
Query:  152 KPWAREAPIQRHKVVEFHCGDALSFMQAREVLDVMRAEHEKNDCGFFAFTLIRSPLDWIVSLYDDICHRRLRGHKDTCPHIA----KPKEAMLEFPHRDGIVSYMAHGFKGWDSPGPVDDETVEDVVASLRSHLDLVALTEDVPRVRRYLTKRFAAPNGELSPQVGAALDRGSLQNANNIKTIRVGDFDAAELEQLNSTIQLDWKLYDAV 357
            KPW +E+P  RHK++EFHCGDALS MQARE L+ MR EH KNDCGFFAFT++R PL+W+VSLYDD+CHRRLRGHKDTCP  A     PK+ ML +PHRDG+VSY+AHGF GW SPGPVD+ TVE+++ S   HLDLVALT +VP++RRYLTKRF AP+G L+PQV  AL RG LQNAN +KTIR+ DFD  EL QLNSTIQLDW LY+AV
Sbjct:    9 KPWLKESPSHRHKLIEFHCGDALSLMQAREALETMRHEHAKNDCGFFAFTMVRPPLEWLVSLYDDLCHRRLRGHKDTCPQQAGDSMTPKQEMLAYPHRDGLVSYLAHGFNGWASPGPVDEGTVEEILESFGRHLDLVALTSEVPQIRRYLTKRFVAPHGVLTPQVEDALHRGELQNANKVKTIRLSDFDPDELAQLNSTIQLDWMLYEAV 218          
BLAST of mRNA_C-linearis_contig111.1481.1 vs. uniprot
Match: D7G147_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G147_ECTSI)

HSP 1 Score: 321 bits (823), Expect = 1.530e-106
Identity = 143/211 (67.77%), Postives = 175/211 (82.94%), Query Frame = 0
Query:  150 SMKPWAREAPIQRHKVVEFHCGDALSFMQAREVLDVMRAEHEKNDCGFFAFTLIRSPLDWIVSLYDDICHRRLRGHKDTCP--HIAKPKEAMLEFPHRDGIVSYMAHGFKGWDSPGPVDDETVEDVVASLRSHLDLVALTEDVPRVRRYLTKRFAAPNGELSPQVGAALDRGSLQNANNIKTIRVGDFDAAELEQLNSTIQLDWKLYDAVL 358
            ++KPW +E+P QRHK++EFHCGDALSFMQARE L+ MR EH KNDCGFFAFT++R PL+W+VSLYDD+CHRRL+GHK+TCP  +   PK+ ML +PHRDG+VSY+AHGF GW SPG VD+ TVE+++ S   HLDLVALT +VP++RRYLT+RF AP+G L+PQV   LDRG LQNAN +KTIR+ DFD  EL QLNSTIQLDW LY+ VL
Sbjct:   17 TLKPWLQESPSQRHKLIEFHCGDALSFMQAREALETMRHEHAKNDCGFFAFTMVRQPLEWLVSLYDDLCHRRLKGHKETCPQQNSMTPKQEMLAYPHRDGLVSYLAHGFNGWASPGSVDERTVEEILESFGRHLDLVALTSEVPQIRRYLTRRFVAPHGVLTPQVEDNLDRGELQNANKVKTIRLSDFDPDELAQLNSTIQLDWMLYEGVL 227          
BLAST of mRNA_C-linearis_contig111.1481.1 vs. uniprot
Match: A0A6H5K7U3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7U3_9PHAE)

HSP 1 Score: 111 bits (277), Expect = 4.420e-26
Identity = 66/152 (43.42%), Postives = 84/152 (55.26%), Query Frame = 0
Query:    1 MRSTRGSSSRTPPKWIITAVSYGVVALCCGWAGHYYHAIAGRTGANPVGFAATETEXXXXXXXXVEAREGAAATAEAVRDGHT-SRPPWDPLGCQTIVFFHVPKTGGESMNELWFNMPGDERVSWWKKGYMTTSLRNTGLQPKKQEEFLKSM 151
            MR  RG++  +    +I A+S G VAL CGWAGH YHA+  R+  +                    A+ G  A   +  +G T SR PWDP GCQTI+FFH+PKTGGES+N+L    PG   V WWK  Y  +S R TGL+  +Q   LKSM
Sbjct:    1 MRPDRGANGWSRRSGLIRALSCGTVALTCGWAGHSYHAMIQRSSKS------NGKNLLLRVQEPTIAKSGEPAAPVSSGEGATTSRAPWDPQGCQTILFFHIPKTGGESINQL---RPG---VPWWKSAYDWSSFRITGLELTEQTNHLKSM 140          
BLAST of mRNA_C-linearis_contig111.1481.1 vs. uniprot
Match: K0TC92_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0TC92_THAOC)

HSP 1 Score: 66.6 bits (161), Expect = 1.840e-8
Identity = 61/238 (25.63%), Postives = 103/238 (43.28%), Query Frame = 0
Query:   76 EAVRDGHTSRPPWDPLGCQTIVFFHVPKTGGESMNELW--FNMPGDERVSWWKKGYMTTSLRNTGLQ-PKKQEE-FLKSMKPWAREAPIQRHKVVEFHCGDALSFMQAREVLDVMRAEHEKNDCGFFAFTLIRSPLDWIVSLYDDICHRRLRGHKDTCPHIAKPKEAMLEFPHRDGIVSYMAHGF----------------KGWDSPGPVD-DETVEDVVASLRSHLDLVALTEDVPR 292
            +A  D  T   P  P  C  + F+H+P TGG S+N  +  FN P    VS+++   + T    T  + P++ E+ F + M    +       ++   H  D     ++ ++L++ R+E E  +C F +  +IR PL+  +SL     H+ ++    T    AK     LE P + G+ + +   F                 G  +P  V  +E V   +  L  H D+V +T DV R
Sbjct:  101 KATNDRSTIPRPHTPYKCGVVWFYHIPCTGGSSINRWFRKFNSPQYGNVSYYQNWALETLKDGTFCKNPQRVEDKFAEGMLKHVQNLAPTEWRIAHSHLVD-FYLNESEDLLNLWRSEVEAQNCEFISSIMIRDPLNHALSL-----HKIIKSKNSTQEEWAKH----LESPTKQGLWATVLDFFLYNNQGNRQRPNYPRNPGGRNPFNVSKEEKVARAMELLARHFDIVTMTHDVFR 328          
BLAST of mRNA_C-linearis_contig111.1481.1 vs. uniprot
Match: K0TQ74_THAOC (Uncharacterized protein (Fragment) n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0TQ74_THAOC)

HSP 1 Score: 55.5 bits (132), Expect = 9.120e-5
Identity = 60/226 (26.55%), Postives = 92/226 (40.71%), Query Frame = 0
Query:   90 PLGCQTIVFFHVPKTGGESMN---------ELW------FNMPGDERVSWW--KKGYMTTSLRNT---GLQPKKQEEFLKSMKPWAREAPIQRHKVVEFHCGDALSFMQAREVLDVMRAEHEKNDCGFFAFTLIRSPLDWIVSLYDDICH-RRLRGHK-DTCPHIAKPKEAM--LEFPHRDGI----VSYMAHGFKGWDSPGPVDDET-VEDVVASLRSHLDLVAL 286
            P  C  ++F+HVP TGG ++N           W       N+       W   KKG+ T   +NT   G + KK       M  +  +      K+   H   +L    +  +L   R   E   CG+ A  + R PL   +SL+  +    +  GHK D+   I    + M  L+ P+  GI    + Y  + F    +P  VD ET V+  +  LR H D+V +
Sbjct:  191 PYSCGMVLFYHVPSTGGATINTWLQRYTEDNAWRPKNAGVNVTAKYFTHWHRDKKGFGTNESQNTFIDGGEGKKHG----GMNEFVTDFEENEWKIAHVH-HSSLELNASEHLLQGWRDTVESQGCGYVATVMFRDPLSHTLSLHKHLGRFSQSHGHKIDSEERIIDNIQYMQHLKSPNVIGIWATQLDYFLYNFLN-RNPYSVDKETKVKRALQLLRDHFDIVTV 410          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig111.1481.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D7FL74_ECTSI4.650e-12857.76Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5J9V3_9PHAE5.780e-10769.52Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G147_ECTSI1.530e-10667.77Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K7U3_9PHAE4.420e-2643.42Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
K0TC92_THAOC1.840e-825.63Uncharacterized protein n=1 Tax=Thalassiosira ocea... [more]
K0TQ74_THAOC9.120e-526.55Uncharacterized protein (Fragment) n=1 Tax=Thalass... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005331SulfotransferasePFAMPF03567Sulfotransfer_2coord: 95..234
e-value: 6.0E-6
score: 26.4
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..14
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 15..36
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 37..370
NoneNo IPR availableTMHMMTMhelixcoord: 13..35

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig111contigC-linearis_contig111:51437..55659 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig111.1481.1mRNA_C-linearis_contig111.1481.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig111 51273..57787 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig111.1481.1 ID=prot_C-linearis_contig111.1481.1|Name=mRNA_C-linearis_contig111.1481.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=371bp
MRSTRGSSSRTPPKWIITAVSYGVVALCCGWAGHYYHAIAGRTGANPVGF
AATETETAAAAAAAVEAREGAAATAEAVRDGHTSRPPWDPLGCQTIVFFH
VPKTGGESMNELWFNMPGDERVSWWKKGYMTTSLRNTGLQPKKQEEFLKS
MKPWAREAPIQRHKVVEFHCGDALSFMQAREVLDVMRAEHEKNDCGFFAF
TLIRSPLDWIVSLYDDICHRRLRGHKDTCPHIAKPKEAMLEFPHRDGIVS
YMAHGFKGWDSPGPVDDETVEDVVASLRSHLDLVALTEDVPRVRRYLTKR
FAAPNGELSPQVGAALDRGSLQNANNIKTIRVGDFDAAELEQLNSTIQLD
WKLYDAVLGDASQQVDLGRF*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005331Sulfotransferase