mRNA_C-linearis_contig111.1479.1 (mRNA) Chordaria linearis ClinC8C monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-linearis_contig111.1479.1
Unique NamemRNA_C-linearis_contig111.1479.1
TypemRNA
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Homology
BLAST of mRNA_C-linearis_contig111.1479.1 vs. uniprot
Match: D7FL76_ECTSI (Tropinone reductase, putative / tropine dehydrogenase, putative n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FL76_ECTSI)

HSP 1 Score: 491 bits (1265), Expect = 1.090e-168
Identity = 246/299 (82.27%), Postives = 272/299 (90.97%), Query Frame = 2
Query:  224 LYVCLLAGSNSGRVSGSPLSHERYQVTILRAERQARWSLEGKTAVVTGGTKGIGKAIVEELACLGARVLTCSRNSADVAACLEEWKSKGLIVHGTAADVTTAEGREALVKSAQEHFGGLLDILVNNVGTSIRKATVDFTPEEFAHVMDTNFTSLFLLTQLLYPFLKAAAAAEGARENGGSSVVNISSVAGLTSIKSGTPYASSKAAMNQLTRNWGCEWAPDGIRVNAVAPWYTKTPLTEPVQADASKVEAIIQRTPMGRWADADEVSGIVAFLCMRGAGYITSQVISTDGGFTANGWMT 1120
            + V +L  S    V GSPLS ER+Q+T   AER+ARWSLEGKTAVVTGGTKGIGKAIVEELACLGA+V+TCSRN ADVAACLEEWKSKGL+V GTAADVTTAEGRE+LVK A+EHFGGLLDILVNNVGT+IRKATVD+TPEE A+VMDTNFTSLFLLT+LL+P LKAAAA +G+RENGGSSV+NISSVAG+T IKSG+PYA+SKAAMNQ+TR WGCEWAPDGIRVNAVAPWYTKTPLTEPVQAD  +V  I QRTPM RWADADEVSG+VAFLCM+GAGYITSQVI+TDGGFTANGWMT
Sbjct:    9 IQVLVLTLSAVASVWGSPLSQERFQITTFGAERRARWSLEGKTAVVTGGTKGIGKAIVEELACLGAKVITCSRNPADVAACLEEWKSKGLLVEGTAADVTTAEGRESLVKLAEEHFGGLLDILVNNVGTNIRKATVDYTPEELAYVMDTNFTSLFLLTKLLHPLLKAAAAVKGSRENGGSSVINISSVAGITPIKSGSPYAASKAAMNQVTRLWGCEWAPDGIRVNAVAPWYTKTPLTEPVQADPVRVNEITQRTPMKRWADADEVSGMVAFLCMKGAGYITSQVIATDGGFTANGWMT 307          
BLAST of mRNA_C-linearis_contig111.1479.1 vs. uniprot
Match: D7FL79_ECTSI (Tropinone reductase, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FL79_ECTSI)

HSP 1 Score: 358 bits (920), Expect = 3.550e-117
Identity = 182/269 (67.66%), Postives = 217/269 (80.67%), Query Frame = 2
Query:  314 AERQARWSLEGKTAVVTGGTKGIGKAIVEELACLGARVLTCSRNSADVAACLEEWKSKGLIVHGTAADVTTAEGREALVKSAQEHFGGLLDILVNNVGTSIRKA-TVDFTPEEFAHVMDTNFTSLFLLTQLLYPFLKAAAAAEGARENGGSSVVNISSVAGLTSIKSGTPYASSKAAMNQLTRNWGCEWAPDGIRVNAVAPWYTKTPLTEPVQADASKVEAIIQRTPMGRWADADEVSGIVAFLCMRGAGYITSQVISTDGGFTANGWM 1117
            A R+A+WSLEG+TA+VTGGTKGIGKAIVEELACLGA+VLTCSR    V AC+ EW++KGL VHG A DVTTAEGR+ L  +A+EHF G LDILVNNVG SIRK+ T DFTPEEF  +++TNF+++  LT+L +P LKAAAAAEGAR+ GGSSVVNISS+AG+T++K+G  YA+SKAA+N+LT NWGCEWA DGIRVNAVAP  T TP TE V         ++ R PMGRWAD  E+SG VAFLCM+GA YITSQVI  DGG+ +NGWM
Sbjct:    6 AGRRAQWSLEGRTALVTGGTKGIGKAIVEELACLGAKVLTCSRTEDGVIACITEWRAKGLEVHGIAVDVTTAEGRQELFSAAEEHFDGALDILVNNVGRSIRKSSTFDFTPEEFETIINTNFSTVLSLTKLFHPLLKAAAAAEGARDKGGSSVVNISSIAGVTAVKTGAAYAASKAAINRLTINWGCEWAKDGIRVNAVAPGATNTPSTESVPRSTE----LMDRIPMGRWADPHEISGQVAFLCMKGASYITSQVICVDGGWASNGWM 270          
BLAST of mRNA_C-linearis_contig111.1479.1 vs. uniprot
Match: A0A835YM08_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YM08_9STRA)

HSP 1 Score: 325 bits (833), Expect = 2.880e-104
Identity = 167/266 (62.78%), Postives = 200/266 (75.19%), Query Frame = 2
Query:  323 QARWSLEGKTAVVTGGTKGIGKAIVEELACLGARVLTCSRNSADVAACLEEWKSKGLIVHGTAADVTTAEGREALVKSAQEHFGGLLDILVNNVGTSIRKATVDFTPEEFAHVMDTNFTSLFLLTQLLYPFLKAAAAAEGARENGGSSVVNISSVAGLTSIKSGTPYASSKAAMNQLTRNWGCEWAPDGIRVNAVAPWYTKTPLTEPVQADASKVEAIIQRTPMGRWADADEVSGIVAFLCMRGAGYITSQVISTDGGFTANGWMT 1120
            ++RW L+G+ A+VTGGTKGIG AIV ELA LGA V TC+R+ AD+  CL EW+++GL VHG+ ADV++AE R AL++   E FGG LDILVNNVGTSIR+ATVD+T EE  HV+  NF S F + QL +P LK A         GG SVVNI SVAG+TSIKSGTPYA+SKAAM+++T+N  CEWA DGIRVN VAPWYT TPL  PV  D  K   I+ RTPM R A+A+EVS +VAFLCMRGA YIT QV+  DGGFT NGW+T
Sbjct:    2 KSRWRLDGQKALVTGGTKGIGNAIVVELAHLGAEVYTCARSDADLQQCLAEWRAQGLKVHGSVADVSSAEDRAALLQKVGEAFGGSLDILVNNVGTSIRRATVDYTSEEAEHVLRVNFHSCFAMMQLCHPLLKEA--------QGGGSVVNIGSVAGVTSIKSGTPYAASKAAMHKVTQNCACEWAGDGIRVNCVAPWYTNTPLASPVFEDKIKYAEILSRTPMKRIAEAEEVSALVAFLCMRGASYITGQVVCVDGGFTQNGWIT 259          
BLAST of mRNA_C-linearis_contig111.1479.1 vs. uniprot
Match: A0A6H5JMS4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMS4_9PHAE)

HSP 1 Score: 291 bits (745), Expect = 1.970e-90
Identity = 162/297 (54.55%), Postives = 196/297 (65.99%), Query Frame = 2
Query:  374 KGIGKAIVEELACLGARVLTCSRNSADVAACL-------------------------EEWKSKGLIVHGTAADVTTAEGREALVKSAQEHFGGLLDILVNNVGTSIRKA-TVDFTPEEFAHVMDTNFTSLFLLTQ-----------------------LLYPFLKAAAAAEGARENGGSSVVNISSVAGLTSIKSGTPYASSKAAMNQLTRNWGCEWAPDGIRVNAVAPWYTKTPLTEPVQADASKVEAIIQRTPMGRWADADEVSGIVAFLCMRGAGYITSQVISTDGGFTANGWM 1117
            +GIGKAIVEELACLGA+VLTCSR    V AC+                         +EW++KGL V+G A DVTTAEGR+ L  +A+E F G LDILVNNVG SIRK+ T D+TPEEF  ++DTNF+++  LT+                       L +P LKAAAAAEGAR  GGSSVVNISS+AG+ ++K+G  YA+SKAA+N+LT NWGCEWA DGIRVNAVAP  T TP TE V         ++ R PMGRWA+  E+SG VAFLCM+GA YITSQVI  DGG+ +NGWM
Sbjct:   15 RGIGKAIVEELACLGAKVLTCSRTEDGVTACITGCLCVVLRDLSSRAFAVVLCLWLQQEWRAKGLEVYGIAVDVTTAEGRQELYSAAEERFDGALDILVNNVGRSIRKSSTFDYTPEEFETIIDTNFSTVLSLTKARLYVFTLICLGRFASLIPCSVFLFHPLLKAAAAAEGARAKGGSSVVNISSIAGVIAVKTGAAYAASKAAINRLTINWGCEWAKDGIRVNAVAPGATNTPSTESVPRSTE----LMDRIPMGRWAEPHEISGQVAFLCMKGASYITSQVICVDGGWASNGWM 307          
BLAST of mRNA_C-linearis_contig111.1479.1 vs. uniprot
Match: A0A087G546_ARAAL (Uncharacterized protein n=2 Tax=Arabis TaxID=50451 RepID=A0A087G546_ARAAL)

HSP 1 Score: 286 bits (733), Expect = 2.720e-89
Identity = 145/262 (55.34%), Postives = 186/262 (70.99%), Query Frame = 2
Query:  329 RWSLEGKTAVVTGGTKGIGKAIVEELACLGARVLTCSRNSADVAACLEEWKSKGLIVHGTAADVTTAEGREALVKSAQEHFGGLLDILVNNVGTSIRKATVDFTPEEFAHVMDTNFTSLFLLTQLLYPFLKAAAAAEGARENGGSSVVNISSVAGLTSIKSGTPYASSKAAMNQLTRNWGCEWAPDGIRVNAVAPWYTKTPLTEPVQADASKVEAIIQRTPMGRWADADEVSGIVAFLCMRGAGYITSQVISTDGGFTANGW 1114
            RWSL GKTA+VTGGT+GIG+A+VEELA  GA+V TCSRN  ++ ACL +WKS GL+V+G+  D +  + RE L++     F G L+ILVNNVGT+IRK TVD++ EE+A +M TN  S F L+QL +P LKA+         G  SVV ISSVAGL  +++G+ Y ++K A+NQLTRN  CEWA D IR N VAPWY KT L EP+      VEA++ RTP+GR  + +EVS +VAFLC+  + YIT QVIS DGGFT NG+
Sbjct:    6 RWSLAGKTALVTGGTRGIGRAVVEELARFGAKVYTCSRNEEELKACLADWKSNGLVVYGSVCDASVKDQREQLMQEVSAMFSGKLNILVNNVGTNIRKPTVDYSSEEYAKIMSTNLESAFHLSQLAHPLLKAS---------GVGSVVFISSVAGLVHVRTGSIYGATKGALNQLTRNLACEWAGDNIRTNCVAPWYIKTSLVEPLLEKKDFVEAVVSRTPLGRVGEPEEVSSLVAFLCLPASSYITGQVISVDGGFTVNGF 258          
BLAST of mRNA_C-linearis_contig111.1479.1 vs. uniprot
Match: TRNHF_ARATH (Tropinone reductase homolog At5g06060 n=9 Tax=Brassicaceae TaxID=3700 RepID=TRNHF_ARATH)

HSP 1 Score: 281 bits (719), Expect = 3.540e-87
Identity = 141/266 (53.01%), Postives = 185/266 (69.55%), Query Frame = 2
Query:  317 ERQARWSLEGKTAVVTGGTKGIGKAIVEELACLGARVLTCSRNSADVAACLEEWKSKGLIVHGTAADVTTAEGREALVKSAQEHFGGLLDILVNNVGTSIRKATVDFTPEEFAHVMDTNFTSLFLLTQLLYPFLKAAAAAEGARENGGSSVVNISSVAGLTSIKSGTPYASSKAAMNQLTRNWGCEWAPDGIRVNAVAPWYTKTPLTEPVQADASKVEAIIQRTPMGRWADADEVSGIVAFLCMRGAGYITSQVISTDGGFTANGW 1114
            E   RWSL GKTA+VTGGT+GIG+A+VEELA  GA+V TCSRN  ++ ACL +WK+ GL+V G+  D +  + RE L++ A   F G L+IL+NNVGT++RK TV+++ EE+A +M TN  S F L+Q+ +P LKA+         G  S+V ISSVAGL  + SG+ Y ++K A+NQLTRN  CEWA D IR N VAPWY KT L E +      VEA++ RTP+GR  + +EVS +VAFLC+  + YIT QVIS DGGFT NG+
Sbjct:    2 ETDKRWSLAGKTALVTGGTRGIGRAVVEELAKFGAKVHTCSRNQEELNACLNDWKANGLVVSGSVCDASVRDQREKLIQEASSAFSGKLNILINNVGTNVRKPTVEYSSEEYAKIMSTNLESAFHLSQIAHPLLKAS---------GVGSIVFISSVAGLVHLSSGSIYGATKGALNQLTRNLACEWASDNIRTNCVAPWYIKTSLVETLLEKKEFVEAVVSRTPLGRVGEPEEVSSLVAFLCLPASSYITGQVISVDGGFTVNGF 258          
BLAST of mRNA_C-linearis_contig111.1479.1 vs. uniprot
Match: A0A5N6QE30_9ROSI (Uncharacterized protein n=1 Tax=Carpinus fangiana TaxID=176857 RepID=A0A5N6QE30_9ROSI)

HSP 1 Score: 281 bits (718), Expect = 5.700e-87
Identity = 147/263 (55.89%), Postives = 187/263 (71.10%), Query Frame = 2
Query:  329 RWSLEGKTAVVTGGTKGIGKAIVEELACLGARVLTCSRNSADVAACLEEWKSKGLIVHGTAADVTTAEGREALVKSAQEHFGGLLDILVNNVGTSIRKATVDFTPEEFAHVMDTNFTSLFLLTQLLYPFLKAAAAAEGARENGGSSVVNISSVAGLTSIKSGTPYASSKAAMNQLTRNWGCEWAPDGIRVNAVAPWYTKTPLTEPVQADASKVEAIIQRTPMGRWADADEVSGIVAFLCMRGAGYITSQVISTDGGFTANGWM 1117
            RWSL+G TA+VTGGT+GIG A+VEELA  GA V TCSRN A+++ CL+EW++KG +V G+  D ++   RE LV+     FGG L+IL+NNVGT+IRK T++FTPEE++ +M TNF S F L QL +P LKA+         G  SVV ISSVAG+ SI SG+ YA++KAA+NQLT+N  CEWA D IR N VAPWYT+T L E + AD   VE I  +TP+ R A+A+EVS +VAFLC+  A YIT Q IS DGG T N + 
Sbjct:    9 RWSLKGMTALVTGGTRGIGHAVVEELASFGASVHTCSRNEAELSKCLKEWEAKGFVVSGSVCDASSRAHRERLVEEVASVFGGKLNILINNVGTNIRKPTIEFTPEEYSTLMTTNFESTFHLCQLAHPLLKAS---------GIGSVVFISSVAGVVSIGSGSIYAATKAAINQLTKNLACEWAKDNIRTNCVAPWYTRTSLVENLIADNKFVEEIACKTPLERVAEAEEVSSLVAFLCLPAASYITGQTISVDGGMTVNAFQ 262          
BLAST of mRNA_C-linearis_contig111.1479.1 vs. uniprot
Match: A0A6J1CCC2_MOMCH (tropinone reductase homolog At5g06060 n=1 Tax=Momordica charantia TaxID=3673 RepID=A0A6J1CCC2_MOMCH)

HSP 1 Score: 280 bits (717), Expect = 9.480e-87
Identity = 141/263 (53.61%), Postives = 191/263 (72.62%), Query Frame = 2
Query:  326 ARWSLEGKTAVVTGGTKGIGKAIVEELACLGARVLTCSRNSADVAACLEEWKSKGLIVHGTAADVTTAEGREALVKSAQEHFGGLLDILVNNVGTSIRKATVDFTPEEFAHVMDTNFTSLFLLTQLLYPFLKAAAAAEGARENGGSSVVNISSVAGLTSIKSGTPYASSKAAMNQLTRNWGCEWAPDGIRVNAVAPWYTKTPLTEPVQADASKVEAIIQRTPMGRWADADEVSGIVAFLCMRGAGYITSQVISTDGGFTANGW 1114
            +RWSL+G TA+VTGGT+GIG+A+VEELA LGA V TCSRN A++  CL+EW+ KG +V G+  D ++   RE L++  +  F G L+ILVNNVG +IRK T++++ EEF+ +M TNF S + L+QL +P LKA+         G  S+V ISSV GL SI SG+ YA++K+A+NQLT+N  CEWA D IR N VAPWYT TPL E +  + + V+ ++ RTP+GR  +++EVS +VAFLC+  A YIT Q+IS DGGFTANG+
Sbjct:   11 SRWSLKGSTALVTGGTRGIGRAVVEELAALGASVHTCSRNEAELNRCLKEWEGKGFVVRGSVCDASSRTHRERLMQEVESAFNGRLNILVNNVGKNIRKPTIEYSLEEFSSLMTTNFESAYHLSQLSHPLLKAS---------GNGSIVFISSVGGLMSIGSGSIYAATKSAINQLTKNLACEWAKDNIRSNCVAPWYTNTPLVEKLLDNKTFVDKVVSRTPLGRIGESNEVSSLVAFLCLPTASYITGQIISVDGGFTANGF 264          
BLAST of mRNA_C-linearis_contig111.1479.1 vs. uniprot
Match: A0A6J1IKI1_CUCMA (tropinone reductase homolog At5g06060 n=3 Tax=Cucurbita TaxID=3660 RepID=A0A6J1IKI1_CUCMA)

HSP 1 Score: 279 bits (714), Expect = 2.650e-86
Identity = 142/263 (53.99%), Postives = 190/263 (72.24%), Query Frame = 2
Query:  326 ARWSLEGKTAVVTGGTKGIGKAIVEELACLGARVLTCSRNSADVAACLEEWKSKGLIVHGTAADVTTAEGREALVKSAQEHFGGLLDILVNNVGTSIRKATVDFTPEEFAHVMDTNFTSLFLLTQLLYPFLKAAAAAEGARENGGSSVVNISSVAGLTSIKSGTPYASSKAAMNQLTRNWGCEWAPDGIRVNAVAPWYTKTPLTEPVQADASKVEAIIQRTPMGRWADADEVSGIVAFLCMRGAGYITSQVISTDGGFTANGW 1114
            +RWSL+G TA+VTGGT+GIG+A+VEELA LGA V TCSRN  ++  CL+EW+ KG +V G+  D ++   RE LV+     F G L+ILVNNVGT+IRK +++++ EE++ +M TNF S+F L+QL +P LKA+         G  S+V +SSV GL SI SG+ YA+SK+AMNQLT+N  CEWA D IR N VAPWYT T L E +  + + V+ ++ RTP+GR  +++EVS +VAFLCM  A YIT Q+IS DGGFTANG+
Sbjct:   11 SRWSLKGFTALVTGGTRGIGRAVVEELAGLGASVHTCSRNELELNQCLKEWEGKGFVVSGSVCDASSRTQREKLVQEVASAFNGTLNILVNNVGTNIRKPSIEYSLEEYSTLMTTNFESVFHLSQLAHPLLKAS---------GNGSIVFVSSVGGLVSIGSGSIYAASKSAMNQLTKNLACEWAKDNIRSNTVAPWYTNTSLVEKLLDNKTFVDKVVSRTPLGRIGESNEVSSLVAFLCMPAASYITGQIISVDGGFTANGF 264          
BLAST of mRNA_C-linearis_contig111.1479.1 vs. uniprot
Match: V4LL57_EUTSA (Uncharacterized protein n=6 Tax=Brassicaceae TaxID=3700 RepID=V4LL57_EUTSA)

HSP 1 Score: 278 bits (711), Expect = 5.140e-86
Identity = 141/266 (53.01%), Postives = 183/266 (68.80%), Query Frame = 2
Query:  317 ERQARWSLEGKTAVVTGGTKGIGKAIVEELACLGARVLTCSRNSADVAACLEEWKSKGLIVHGTAADVTTAEGREALVKSAQEHFGGLLDILVNNVGTSIRKATVDFTPEEFAHVMDTNFTSLFLLTQLLYPFLKAAAAAEGARENGGSSVVNISSVAGLTSIKSGTPYASSKAAMNQLTRNWGCEWAPDGIRVNAVAPWYTKTPLTEPVQADASKVEAIIQRTPMGRWADADEVSGIVAFLCMRGAGYITSQVISTDGGFTANGW 1114
            E   RWSL GKTA+VTGGT+GIG+AIVEELA  GA V TCSRN  ++ ACL+ WKS GL+V G+  D +  + RE L++     F G L+IL+NNVGT+IRK TV+++ EE+A +M TN  S F  +Q+ +P LK++         G  S+V ISSVAGL  ++SG+ Y ++K A+NQLTRN  CEWA D IR N VAPWY KT L EP+      VEA++ RTP+GR  + +EV+ +VAFLC+  A YIT QVIS DGG T NG+
Sbjct:    2 ETDKRWSLVGKTALVTGGTRGIGRAIVEELARFGATVHTCSRNQEELKACLDVWKSNGLVVSGSVCDASVRDQREKLIQEVSSAFSGKLNILINNVGTNIRKPTVEYSSEEYAKIMSTNLESAFHFSQIAHPLLKSS---------GVGSIVFISSVAGLVHLRSGSIYGATKGALNQLTRNLACEWAGDNIRTNCVAPWYIKTSLVEPLLEKKDFVEAVVSRTPLGRVGEPEEVASLVAFLCLPAASYITGQVISVDGGLTVNGF 258          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig111.1479.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FL76_ECTSI1.090e-16882.27Tropinone reductase, putative / tropine dehydrogen... [more]
D7FL79_ECTSI3.550e-11767.66Tropinone reductase, putative n=1 Tax=Ectocarpus s... [more]
A0A835YM08_9STRA2.880e-10462.78Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A6H5JMS4_9PHAE1.970e-9054.55Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A087G546_ARAAL2.720e-8955.34Uncharacterized protein n=2 Tax=Arabis TaxID=50451... [more]
TRNHF_ARATH3.540e-8753.01Tropinone reductase homolog At5g06060 n=9 Tax=Bras... [more]
A0A5N6QE30_9ROSI5.700e-8755.89Uncharacterized protein n=1 Tax=Carpinus fangiana ... [more]
A0A6J1CCC2_MOMCH9.480e-8753.61tropinone reductase homolog At5g06060 n=1 Tax=Momo... [more]
A0A6J1IKI1_CUCMA2.650e-8653.99tropinone reductase homolog At5g06060 n=3 Tax=Cucu... [more]
V4LL57_EUTSA5.140e-8653.01Uncharacterized protein n=6 Tax=Brassicaceae TaxID... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig111contigC-linearis_contig111:26978..32332 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score493.0
Seed ortholog evalue1e-136
Seed eggNOG ortholog2880.D7FL76
KEGG rclassRC00144
KEGG koko:K05354,ko:K08081
KEGG ReactionR02832,R06734
KEGG Pathwayko00960,ko01100,ko01110,map00960,map01100,map01110
Hectar predicted targeting categorysignal peptide
GOsGO:0002213,GO:0003674,GO:0003824,GO:0004022,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005694,GO:0005737,GO:0005829,GO:0006950,GO:0006952,GO:0007568,GO:0008150,GO:0008152,GO:0016491,GO:0016614,GO:0016616,GO:0032502,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0044424,GO:0044444,GO:0044464,GO:0050896,GO:0055114
EggNOG free text desc.oxidation-reduction process
EggNOG OGsCOG1028@1,KOG0725@2759
Ec32 ortholog descriptiontropinone reductase, putative / tropine dehydrogenase, putative
Ec32 orthologEc-19_005210.1
EC1.1.1.206,1.1.1.236
COG Functional cat.IQ
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000
Exons7
Model size1861
Cds size945
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927480.2217968-UTR-C-linearis_contig111:26977..271551622927480.2217968-UTR-C-linearis_contig111:26977..27155Chordaria linearis ClinC8C monoicousUTRC-linearis_contig111 26978..27155 +
1690879725.0324342-UTR-C-linearis_contig111:26977..271551690879725.0324342-UTR-C-linearis_contig111:26977..27155Chordaria linearis ClinC8C monoicousUTRC-linearis_contig111 26978..27155 +
1622927480.4708612-UTR-C-linearis_contig111:31594..323321622927480.4708612-UTR-C-linearis_contig111:31594..32332Chordaria linearis ClinC8C monoicousUTRC-linearis_contig111 31595..32332 +
1690879725.1168706-UTR-C-linearis_contig111:31594..323321690879725.1168706-UTR-C-linearis_contig111:31594..32332Chordaria linearis ClinC8C monoicousUTRC-linearis_contig111 31595..32332 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927480.2331774-CDS-C-linearis_contig111:27155..273531622927480.2331774-CDS-C-linearis_contig111:27155..27353Chordaria linearis ClinC8C monoicousCDSC-linearis_contig111 27156..27353 +
1690879725.0444965-CDS-C-linearis_contig111:27155..273531690879725.0444965-CDS-C-linearis_contig111:27155..27353Chordaria linearis ClinC8C monoicousCDSC-linearis_contig111 27156..27353 +
1622927480.2472403-CDS-C-linearis_contig111:28928..290241622927480.2472403-CDS-C-linearis_contig111:28928..29024Chordaria linearis ClinC8C monoicousCDSC-linearis_contig111 28929..29024 +
1690879725.0543673-CDS-C-linearis_contig111:28928..290241690879725.0543673-CDS-C-linearis_contig111:28928..29024Chordaria linearis ClinC8C monoicousCDSC-linearis_contig111 28929..29024 +
1622927480.2618897-CDS-C-linearis_contig111:29361..294451622927480.2618897-CDS-C-linearis_contig111:29361..29445Chordaria linearis ClinC8C monoicousCDSC-linearis_contig111 29362..29445 +
1690879725.0636382-CDS-C-linearis_contig111:29361..294451690879725.0636382-CDS-C-linearis_contig111:29361..29445Chordaria linearis ClinC8C monoicousCDSC-linearis_contig111 29362..29445 +
1622927480.3027885-CDS-C-linearis_contig111:29721..298651622927480.3027885-CDS-C-linearis_contig111:29721..29865Chordaria linearis ClinC8C monoicousCDSC-linearis_contig111 29722..29865 +
1690879725.0743325-CDS-C-linearis_contig111:29721..298651690879725.0743325-CDS-C-linearis_contig111:29721..29865Chordaria linearis ClinC8C monoicousCDSC-linearis_contig111 29722..29865 +
1622927480.414906-CDS-C-linearis_contig111:30471..305831622927480.414906-CDS-C-linearis_contig111:30471..30583Chordaria linearis ClinC8C monoicousCDSC-linearis_contig111 30472..30583 +
1690879725.0836303-CDS-C-linearis_contig111:30471..305831690879725.0836303-CDS-C-linearis_contig111:30471..30583Chordaria linearis ClinC8C monoicousCDSC-linearis_contig111 30472..30583 +
1622927480.4331408-CDS-C-linearis_contig111:30976..311271622927480.4331408-CDS-C-linearis_contig111:30976..31127Chordaria linearis ClinC8C monoicousCDSC-linearis_contig111 30977..31127 +
1690879725.0942638-CDS-C-linearis_contig111:30976..311271690879725.0942638-CDS-C-linearis_contig111:30976..31127Chordaria linearis ClinC8C monoicousCDSC-linearis_contig111 30977..31127 +
1622927480.449585-CDS-C-linearis_contig111:31434..315941622927480.449585-CDS-C-linearis_contig111:31434..31594Chordaria linearis ClinC8C monoicousCDSC-linearis_contig111 31435..31594 +
1690879725.1052232-CDS-C-linearis_contig111:31434..315941690879725.1052232-CDS-C-linearis_contig111:31434..31594Chordaria linearis ClinC8C monoicousCDSC-linearis_contig111 31435..31594 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig111.1479.1prot_C-linearis_contig111.1479.1Chordaria linearis ClinC8C monoicouspolypeptideC-linearis_contig111 27156..31594 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-linearis_contig111.1479.1

>prot_C-linearis_contig111.1479.1 ID=prot_C-linearis_contig111.1479.1|Name=mRNA_C-linearis_contig111.1479.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=315bp
MFSWCGFRTLMGTTSLYVCLLAGSNSGRVSGSPLSHERYQVTILRAERQA
RWSLEGKTAVVTGGTKGIGKAIVEELACLGARVLTCSRNSADVAACLEEW
KSKGLIVHGTAADVTTAEGREALVKSAQEHFGGLLDILVNNVGTSIRKAT
VDFTPEEFAHVMDTNFTSLFLLTQLLYPFLKAAAAAEGARENGGSSVVNI
SSVAGLTSIKSGTPYASSKAAMNQLTRNWGCEWAPDGIRVNAVAPWYTKT
PLTEPVQADASKVEAIIQRTPMGRWADADEVSGIVAFLCMRGAGYITSQV
ISTDGGFTANGWMT*
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mRNA from alignment at C-linearis_contig111:26978..32332+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-linearis_contig111.1479.1 ID=mRNA_C-linearis_contig111.1479.1|Name=mRNA_C-linearis_contig111.1479.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=5355bp|location=Sequence derived from alignment at C-linearis_contig111:26978..32332+ (Chordaria linearis ClinC8C monoicous)
CAGAAAAGCCGTGCGGGAAACTGGTTCGGGGTTGAGATGGTTCTCTCCCC CTCCCACTGACCAAGCAGGCGTGATGCTAGCAGAGTCTATTGCTTATTCG CGGCAGCTCTGGGCTCGCTCAACCGATTGATCACGCACGCGGGCGCAACC AGGACAGGAAGGAAGAGGGGGGGTAGCCATGTTCTCATGGTGCGGGTTCA GGACGCTGATGGGCACGACCTCGCTGTACGTGTGTCTTCTCGCTGGCAGC AACAGCGGGCGCGTGAGTGGGTCGCCGCTATCTCATGAGCGATACCAAGT GACTATCCTCAGGGCGGAGAGACAAGCTCGATGGTCGCTGGAAGGCAAGA CGGCGGTTGTCACAGGAGGAACCAAGGTGTGTCAGCGTCAGAGCAAAGGG GTTGCGCCGCCTCCGTGCGTCGACCTCTGCGATGGAATCATGCGATCTTG CACGCTTGCACATATGGGTTAGTGTCTAGGTGGTTGAAGATTCTCGCCGT TGGGTGGAGAAATCTTGCACCCTATGTCTGTCACTTCCATGCACAAACGT GTGTGCATGTTCACGTGTCGCCCACCCTTGCAAGAGCTTCGGATCGGAAG ATTTGAAGTTGAAGACCAGCCGTTCTTCGTGCCGACTGCCGACTAACCAA GAGAAATTGGCGATGTCGCAAAACGGGTTGTATTCCTGGTATCGAAAAAG GCAACCACGGCTTTACTGAGGGTTTCTTCCCGGAATATCGTTTGTGGGAT ACCACTATTTGGTGGGACAGTTGGCTGGTGAGCCTGTCAGGATATTGGCT ATGCGTCATATAGGTTGCCCTGTTCAGCAGGCAGCACAAGTAGCAACCTT CTTTTGTTCGCTGTTGCTGACTAGTTAACGTTCGATATAGCCAGTAGTTT GCAGGGATGTGAGAAACCGCGGTTCAGCCATGTAACTTACCGGTTATAAT CGCGCCTACCGGGGACAAAAACGACCCATCCCCGGGGTGCTCAACAACGT AATAGCGTTCCTTTGAAAAAGCTCTCGAGCTCTCGAGACGTGCTGTATTG CTGTATGATATTGCGGTTCTGTGGGTGCTGTCACTGTGCTGTTGCTGCTG TATGTTTATATGTTTATCGCTTATGCTCTCTGCCCTGTTACAATGTTACA ATGAATGCTAATTTTGGTTGTGATACATGGTACCCCCGGAGACCAAAAAA TTAAAAATAAACATGACTGACGGTTCATGAGTCTTGATCGTTTAGTGTCC TCAGTTGTAGAAAATAACAAAGACTGAAAGCTTCGAAAAAATAAGAAATA AGAAATAAGCACTAGACTATTATTATTGTGCTGTACTGACTCCCCCCACA GATCGCAGATCGCACGCAAATGCGTGTGGCAAAAAATAAAAACAAAGTAA AAAAATAAAAAAGAAGGAAGGAAAAGAAAAAACTGAGAAAATAACCGGGA ATTTCCATGTAACTTACCGCGAAAGTGAGAACCGGTTGTAAACGGTGACC GGTTTTTCACATCACTGGTAGTTTGGCATCAGAGGCTAACAGGGCGGTTC TGACGCAAGTGTCGGTTCAGTATATGCGGCTTAACCGCAGGCAGTATCTC GGGTAGATTTTACCGACTTTCAGGGGTCCGTACACGGCTGGTATGTTGGG GTCTCCTTGGATATTGTTTTGTTTTGTTTTCGAGAGCGAGAGCAGGGCCA CGCGCCCCCGCTCTCTCACTCTCATCGTCTACCACCTAATAATAAACGCC TGGCCAAGAGTCACCAGCAAACCATCTTCGACCCAGAAGCTCACACGCAC ACACCAGCAAGCTAACCCTTGCTGATAGTGCTGACCTCACTCGGCTGTCA TCATTCAGCCACACCACCATCGTCAACAGAGCCAGCCAGGAAACTTGGGC CATCTTCAACCCAAATTGCTGCAATGTTTTCAAAATGTATTTGTTTTTCA GGGCATCGGTAAGGCTATCGTGGAGGAGCTGGCGTGCCTTGGCGCCAGAG TGCTGACTTGCTCGAGAAACTCGGCGGATGTCGCCGCGTGCCTCGAGGTG ATAAATATGTAAAGCCTGCCTTAATCTTTTGTGTATCGAAACCATGATAC AGCTGCATGTTGAAATTTAATCTCTACCCACATGGCACTGAAGGGACCAA GCTTTCGCCAGGAGGCCGCCTCCACACCACAGCCTGTTTCATGTGCATGA AGACTCGCGGCACCAAGACCATTGCCATTCAATTAATTGGAGTTCAGGTC CGGGCGAGCATTGACCTGGTGCGAATACGGCGTGAGTTCTGCTCTGCCAT TTTCAGCACGACGACGTAGCTTTCCGCGATTTCTGACAGCGAGTCGACAC ACTTGGAACACGTGCCCGACGCCGGTGCCTACAGGAGTGGAAAAGCAAGG GCTTGATCGTGCACGGTACGGCTGCAGACGTTACCACCGCTGAGGGGAGG GAAGCCTTGGTCAAATCGGTGAGCTATCACCCAGCCCGTTGATAAATGCT GCTTTTCATGGGACGTTCCCGTTTCCGGAGTTTTGTGTAAGTGTTGGTTG AACAGAATCGTGTGTCATCTGCCGCTTTTTGCTTGATTGTTTGATTGTTG TGCAAGCTGATGGCAGCTCCGTGCTAGGATTCTTCGATCTGGCCTCTTTC CGTGCTGTAACGCTGATGCAACGATTCATCTCTGTCATATAACCGGTCAT CTCCTCTTTTTCACCGTTTCTCCCGTCTGCCCTTGCATTTGTAGGCGCAA GAGCACTTCGGTGGGCTCCTGGACATCCTAGTCAACAACGTGGGCACCAG CATTCGCAAGGCCACGGTGGACTTCACGCCGGAAGAATTTGCCCATGTGA TGGACACCAACTTCACATCGCTCTTTCTGCTCACCCAGGTCTGTAAGAAA AATCTTGTAGACTATGTTGTGATTGCTCGTTTTGTCGGGATGTTTCATGT TGTCCCCCAAAGCACCTAGATACCCCAAGGGACTACCCAACCCCTATACG GTCGTCCGAAGACACACGTGTCCTTCGGGCCTATTCAACACTGAAGCAAG GCTCGGCACAGCATCACCTTTTTTGGTGCACAGTAAACACAGTAAAAGCC CAGATGGTGGCGTGCGGACACTTGCGGACGCTCACTCCCGCCTTTTAGCT TTGCGGATTTGGCGCTGCCGTGGTCGCCTTCCCCCTCTGACAGGTTGATG CCTTCCTTTTATTTTGTGCTTGGCCGGCGTATTAGGGGCTGGCATGCTAC GCACCCTTTCCAAGTTCCCGTTTTTCAGATAGATAACTTCCGATACAGAT ATTGCACACGTATTGGGTAGAAGATATCGCACAAATGGACTTCGAGAGTT TGGCACGTTCGCATACATCACCTTCACAGGCCGAGCTATTCCGTTTCTGG GGGGCTTAACTGCGTTCGGGTCAGCGCTGCCGTTTCATATTTCGTCACCA ACAGTTTTTGTTTGTTTTTGCTGCCCTTGGCATAATGCATGCAGCTACTA TACCCTTTCCTGAAGGCGGCGGCGGCTGCGGAAGGGGCCAGGGAGAATGG CGGGTCCTCTGTGGTGAACATCTCGAGCGTTGCCGGTCTCACCTCGATAA AGTCAGGTAGGTGCTTGAAGCTCGATCACATGTTGCCCCGAAACCTCTCC GATGGCAGGCTACGTAATAGAACGCATGTGAAGCCGTACGTTGTTGAGTG AACACAAGATGATATCGCTGGTTTTATTGGGCCGGCAACGTTGTAAAGAT TATTCCTTGTTTGCTGGAAGCTTATTTTTCTAGTGGACCGTGCATTTGCA CTGCGATGTCCTGACAAATACCCACAATAGCCCACTGTGCCTATATTTTG GTCTAGACGACAGCGCCACCTGCGATATGCGTTCTCGACCGCGTTGGGAA GGCATCACATCGCCCGTGTAGGATTAAAAGGCGCAATTCACGCAAAAGTT CGCTTCAGAGTCCCTGCCTTGCATTTCTTTCACTTTTTGGTCTCCACAGG AACTCCTTACGCTTCGAGCAAAGCCGCTATGAACCAGCTGACTCGAAACT GGGGTTGCGAGTGGGCTCCGGATGGAATCAGAGTAAACGCAGTCGCGCCG TGGTATACCAAGACGCCGTTGACGGAGCCAGTCCAAGCAGATGCCTCGAA GTGAGTTTTTCATACCCCGTGGAAACCCCCGTTATCTTCTAGGCTCCAAA TAGTTCCGGGTTCGACCGCAAAGGCCGGGTCATCGTGTCCCCCCAACGCG CGATCTAGTTTCTTACATACGCATACTCCCACGATTGCGCGCACGTCACT CAAGTCTTCACTCCTTGCGTTCCCTTTTTGTGGGGGCAAACAACAGTCTA GCGTGGAACTGCAACGCACGTGGACCTGAGACTGTTGCGTGATGCTGCTA AAATCTTAAGAATGGCCACCTCTTCCGCCCCCGCACGTCTCGGTGTGCTC TGTCTAGGGTGGAGGCGATTATTCAGCGGACCCCGATGGGGCGATGGGCG GACGCGGACGAAGTTAGCGGCATCGTGGCCTTCCTCTGCATGAGGGGCGC GGGCTACATAACGTCGCAGGTCATCTCCACGGACGGCGGTTTCACTGCCA ACGGGTGGATGACCTAACTATAATAACGGGCGAACAGGAGCGTATTTCCT TTCAATCGCAATGCTCTGCCTATATATTGTGTCAAGAACACCTACGCGTC AGTGAAGGGGAAGTACTTGTAGGACGAGGTCAGAGAAGGCTGCAAGCTAC GGCCCCGAAACACGGTACTGTAGAGTTTGACAAACTCCTGTACGCCTGGT GTTGGTCATTCGCGCGACCGGCACATATTCCGCAGGGGGGGGGATTCGAA CGGGCGATGGCATGCACACAGAAGATTGAACTAGGGACAGATATCTTAAC AATGTAGCTTTTCGCGTGACCCCACGTGGAGAATTCGCGGCAAGGAAAGT GCGATTTTTCAAGCTCATACATAGGGTCAATGATCTTGGGTGTCGTTCCT CTTTACGTATTGTCCACAAAGTAGGCGAAGGAAGCATCGCGGAAAGCATG CAAGACCAAGAGAGGTCACGAGACGATCACCAAGTAGAGCCCCGCAAAAG AACGTCACGCAGTATGTCAGGTAGATACGTCAGGGCAAAATCTCGCCGAG ATTTTCCACTCACTTCGTAGACCCTAACCCTGAGGTAGGCCAGGCCGGGT GTTTTTGGGAAAGGCTCGACTAGAGTGACACATCCTCTCATCATCTCTCT TGGGCTGCGGGATTACCGCTATGTTTTACATGTGAACAATCAAACAGCAC ATAAAGCTCTACCTATCGCAGGTTGAACAAGTAGGCAATGACATATCGAT CCGAG
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Coding sequence (CDS) from alignment at C-linearis_contig111:26978..32332+

>mRNA_C-linearis_contig111.1479.1 ID=mRNA_C-linearis_contig111.1479.1|Name=mRNA_C-linearis_contig111.1479.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=1890bp|location=Sequence derived from alignment at C-linearis_contig111:26978..32332+ (Chordaria linearis ClinC8C monoicous)
ATGTTCTCATGGTGCGGGTTCAGGACGCTGATGGGCACGACCTCGCTGTA
CGTGTGTCTTCTCGCTGGCAGCAACAGCGGGCGCGTGAGTGGGTCGCCGC
TATCTCATGAGCGATACCAAGTGACTATCCTCAGGGCGGAGAGACAAGCT
CGATGGTCGCTGGAAGGCAAGACGGCGGTTGTCACAGGAGGAACCAAGAT
GTTCTCATGGTGCGGGTTCAGGACGCTGATGGGCACGACCTCGCTGTACG
TGTGTCTTCTCGCTGGCAGCAACAGCGGGCGCGTGAGTGGGTCGCCGCTA
TCTCATGAGCGATACCAAGTGACTATCCTCAGGGCGGAGAGACAAGCTCG
ATGGTCGCTGGAAGGCAAGACGGCGGTTGTCACAGGAGGAACCAAGGGCA
TCGGTAAGGCTATCGTGGAGGAGCTGGCGTGCCTTGGCGCCAGAGTGCTG
ACTTGCTCGAGAAACTCGGCGGATGTCGCCGCGTGCCTCGAGGGCATCGG
TAAGGCTATCGTGGAGGAGCTGGCGTGCCTTGGCGCCAGAGTGCTGACTT
GCTCGAGAAACTCGGCGGATGTCGCCGCGTGCCTCGAGGAGTGGAAAAGC
AAGGGCTTGATCGTGCACGGTACGGCTGCAGACGTTACCACCGCTGAGGG
GAGGGAAGCCTTGGTCAAATCGGAGTGGAAAAGCAAGGGCTTGATCGTGC
ACGGTACGGCTGCAGACGTTACCACCGCTGAGGGGAGGGAAGCCTTGGTC
AAATCGGCGCAAGAGCACTTCGGTGGGCTCCTGGACATCCTAGTCAACAA
CGTGGGCACCAGCATTCGCAAGGCCACGGTGGACTTCACGCCGGAAGAAT
TTGCCCATGTGATGGACACCAACTTCACATCGCTCTTTCTGCTCACCCAG
GCGCAAGAGCACTTCGGTGGGCTCCTGGACATCCTAGTCAACAACGTGGG
CACCAGCATTCGCAAGGCCACGGTGGACTTCACGCCGGAAGAATTTGCCC
ATGTGATGGACACCAACTTCACATCGCTCTTTCTGCTCACCCAGCTACTA
TACCCTTTCCTGAAGGCGGCGGCGGCTGCGGAAGGGGCCAGGGAGAATGG
CGGGTCCTCTGTGGTGAACATCTCGAGCGTTGCCGGTCTCACCTCGATAA
AGTCAGCTACTATACCCTTTCCTGAAGGCGGCGGCGGCTGCGGAAGGGGC
CAGGGAGAATGGCGGGTCCTCTGTGGTGAACATCTCGAGCGTTGCCGGTC
TCACCTCGATAAAGTCAGGAACTCCTTACGCTTCGAGCAAAGCCGCTATG
AACCAGCTGACTCGAAACTGGGGTTGCGAGTGGGCTCCGGATGGAATCAG
AGTAAACGCAGTCGCGCCGTGGTATACCAAGACGCCGTTGACGGAGCCAG
TCCAAGCAGATGCCTCGAAGAACTCCTTACGCTTCGAGCAAAGCCGCTAT
GAACCAGCTGACTCGAAACTGGGGTTGCGAGTGGGCTCCGGATGGAATCA
GAGTAAACGCAGTCGCGCCGTGGTATACCAAGACGCCGTTGACGGAGCCA
GTCCAAGCAGATGCCTCGAAGGTGGAGGCGATTATTCAGCGGACCCCGAT
GGGGCGATGGGCGGACGCGGACGAAGTTAGCGGCATCGTGGCCTTCCTCT
GCATGAGGGGCGCGGGCTACATAACGTCGCAGGTCATCTCCACGGACGGC
GGTTTCACTGCCAACGGGTGGATGACCTAAGGTGGAGGCGATTATTCAGC
GGACCCCGATGGGGCGATGGGCGGACGCGGACGAAGTTAGCGGCATCGTG
GCCTTCCTCTGCATGAGGGGCGCGGGCTACATAACGTCGCAGGTCATCTC
CACGGACGGCGGTTTCACTGCCAACGGGTGGATGACCTAA
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