mRNA_C-linearis_contig107.1054.1 (mRNA) Chordaria linearis ClinC8C monoicous
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Overview
Homology
BLAST of mRNA_C-linearis_contig107.1054.1 vs. uniprot
Match: A0A6H5JCG0_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCG0_9PHAE) HSP 1 Score: 335 bits (858), Expect = 4.090e-107 Identity = 193/436 (44.27%), Postives = 264/436 (60.55%), Query Frame = 1
Query: 22 EGEKAINSGWVLSLKSDKDGSITKPKGRLVAKGFMQREGVNYNQTFAPTPAAASIKIVLAVANQMGYKTYHLDVKQAFTQADLDCRVVMKLPGGCGELSGKYVELKKALYGLKQSGLLWNDLLVEKLVNVHKMEQCKTDPCVFRLIREGKVVL--------ILTVHVDD---KLFVTLNRDFTTVDLGELSFFTGCAVIQDTEKGVTKINQKTFIETLAKRFDVTTTARYPASVGANQGARQEGEPGGTWPYKEAMGSLLWLVVWSRPEIANATRAVA----------------------------------------LYTDSNYAEKADDRRSVSGVAVTLGNATVSWISSAQKIVTLSTTEAECVALGDGVKETLFAKSVASFLVPSLSEKTITAFVDNEGAINLASNSLSSARTKHIDVRFHFIRELVASGTI 1176
EG + ++S W + K++KDG I K K RLVA+GF Q V+Y + +P P++ASIK++LAVAN+ K H DVKQAFT A LD V ++LP GCGE S K V+ ++A+YGLKQSG W + LV + EQCK DPCVFR +++ V IL DD +L +LN+ F T DLGE +F GCAV +D E G +I+Q +I+++ RFDV +T+ PAS G + G +++ E GG WP +EA+GS++W+ +SRP+I+ A RAVA +Y D++YA+ A+DRRSVSG+A T+G +S S Q IV+LS+TEAE +A G+GVKE LF ++V SF+ P S +I DN+GA+ L N LSSAR+KHIDVR+HFIR L SG I
Sbjct: 40 EGRRPVSSKWRFTWKTNKDGKIEKFKARLVARGFSQIPNVDYFHSSSPCPSSASIKLMLAVANEKSLKLNHWDVKQAFTHAKLDEDVFLRLPAGCGEKSHKVVKAERAIYGLKQSGRQWGYHAADTLVE-NGFEQCKADPCVFRKMKDDVVXXXXXXXXDXILVAGSDDDCKELLASLNKAFPTKDLGECVWFDGCAVERDLEAGTLRISQTAYIDSIVNRFDVQSTSSIPASPGVDIGPKRDDESGGEWPVREAIGSMMWVSTFSRPDISFAVRAVARHAHAPAERHWKAIVKILAYLKETRDLGITYERGSGLGLAVYVDASYAD-AEDRRSVSGLATTVGGTVISHGSKTQAIVSLSSTEAEYIAAGEGVKEALFVRAVLSFIAPETSGSSIQVLEDNQGAMALVQNPLSSARSKHIDVRYHFIRGLFRSGDI 473
BLAST of mRNA_C-linearis_contig107.1054.1 vs. uniprot
Match: A0A6H5KSG8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSG8_9PHAE) HSP 1 Score: 344 bits (882), Expect = 1.630e-104 Identity = 191/436 (43.81%), Postives = 267/436 (61.24%), Query Frame = 1
Query: 22 EGEKAINSGWVLSLKSDKDGSITKPKGRLVAKGFMQREGVNYNQTFAPTPAAASIKIVLAVANQMGYKTYHLDVKQAFTQADLDCRVVMKLPGGCGELSGKYVELKKALYGLKQSGLLWNDLLVEKLVNVHKMEQCKTDPCVFRLIREGKVVLILTVHVDD-----------KLFVTLNRDFTTVDLGELSFFTGCAVIQDTEKGVTKINQKTFIETLAKRFDVTTTARYPASVGANQGARQEGEPGGTWPYKEAMGSLLWLVVWSRPEIANATRAVA----------------------------------------LYTDSNYAEKADDRRSVSGVAVTLGNATVSWISSAQKIVTLSTTEAECVALGDGVKETLFAKSVASFLVPSLSEKTITAFVDNEGAINLASNSLSSARTKHIDVRFHFIRELVASGTI 1176
EG + ++S W S K++K+G I K RLVA+GF Q V+Y + +P P++ASIK++LAVAN+ G H DVKQA+T A LD V +KLP GCG+ S K + ++A+YGLKQSG W + LV + EQCK DPCVFR + + VV+I+ ++VDD +L +LN+ F T +LGE +F GCA+ +D E G +I+Q +I+++ +RFDV +T+R PA+ GA+ G ++E E GG WP +EA+GS++W+ +SRP+++ A RAVA +Y D++YA+ +DRRSVSG+A T+G VS S Q IV+LS+TEAE +A G+GVKE LF ++V SF+ P S +I DN+GAI L N LSS RTKHIDVR+HFIR L SG I
Sbjct: 777 EGRRPVSSKWCFSWKTNKEGKIDTFKARLVARGFSQIPNVDYFHSSSPCPSSASIKLMLAVANEKGMNLNHWDVKQAYTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVE-NGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDEDCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPKREDEEGGEWPVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITYQRGSGLGLAVYVDASYADT-EDRRSVSGLATTVGGTVVSHGSKTQSIVSLSSTEAEYIAAGEGVKEALFVRAVLSFVAPETSGSSIKVLEDNQGAIALVQNPLSSGRTKHIDVRYHFIRGLFRSGDI 1210
BLAST of mRNA_C-linearis_contig107.1054.1 vs. uniprot
Match: A0A6H5JZQ8_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZQ8_9PHAE) HSP 1 Score: 344 bits (882), Expect = 3.350e-103 Identity = 191/436 (43.81%), Postives = 267/436 (61.24%), Query Frame = 1
Query: 22 EGEKAINSGWVLSLKSDKDGSITKPKGRLVAKGFMQREGVNYNQTFAPTPAAASIKIVLAVANQMGYKTYHLDVKQAFTQADLDCRVVMKLPGGCGELSGKYVELKKALYGLKQSGLLWNDLLVEKLVNVHKMEQCKTDPCVFRLIREGKVVLILTVHVDD-----------KLFVTLNRDFTTVDLGELSFFTGCAVIQDTEKGVTKINQKTFIETLAKRFDVTTTARYPASVGANQGARQEGEPGGTWPYKEAMGSLLWLVVWSRPEIANATRAVA----------------------------------------LYTDSNYAEKADDRRSVSGVAVTLGNATVSWISSAQKIVTLSTTEAECVALGDGVKETLFAKSVASFLVPSLSEKTITAFVDNEGAINLASNSLSSARTKHIDVRFHFIRELVASGTI 1176
EG + ++S W S K++K+G I K RLVA+GF Q V+Y + +P P++ASIK++LAVAN+ G H DVKQA+T A LD V +KLP GCG+ S K + ++A+YGLKQSG W + LV + EQCK DPCVFR + + VV+I+ ++VDD +L +LN+ F T +LGE +F GCA+ +D E G +I+Q +I+++ +RFDV +T+R PA+ GA+ G ++E E GG WP +EA+GS++W+ +SRP+++ A RAVA +Y D++YA+ +DRRSVSG+A T+G VS S Q IV+LS+TEAE +A G+GVKE LF ++V SF+ P S +I DN+GAI L N LSS RTKHIDVR+HFIR L SG I
Sbjct: 1156 EGRRPVSSKWCFSWKTNKEGKIDTFKARLVARGFSQIPNVDYFHSSSPCPSSASIKLMLAVANEKGMNLNHWDVKQAYTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVE-NGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDEDCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPKREDEEGGEWPVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITYQRGSGLGLAVYVDASYADT-EDRRSVSGLATTVGGTVVSHGSKTQSIVSLSSTEAEYIAAGEGVKEALFVRAVLSFVAPETSGSSIKVLEDNQGAIALVQNPLSSGRTKHIDVRYHFIRGLFRSGDI 1589
BLAST of mRNA_C-linearis_contig107.1054.1 vs. uniprot
Match: A0A6H5JN00_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN00_9PHAE) HSP 1 Score: 344 bits (882), Expect = 4.350e-103 Identity = 191/436 (43.81%), Postives = 267/436 (61.24%), Query Frame = 1
Query: 22 EGEKAINSGWVLSLKSDKDGSITKPKGRLVAKGFMQREGVNYNQTFAPTPAAASIKIVLAVANQMGYKTYHLDVKQAFTQADLDCRVVMKLPGGCGELSGKYVELKKALYGLKQSGLLWNDLLVEKLVNVHKMEQCKTDPCVFRLIREGKVVLILTVHVDD-----------KLFVTLNRDFTTVDLGELSFFTGCAVIQDTEKGVTKINQKTFIETLAKRFDVTTTARYPASVGANQGARQEGEPGGTWPYKEAMGSLLWLVVWSRPEIANATRAVA----------------------------------------LYTDSNYAEKADDRRSVSGVAVTLGNATVSWISSAQKIVTLSTTEAECVALGDGVKETLFAKSVASFLVPSLSEKTITAFVDNEGAINLASNSLSSARTKHIDVRFHFIRELVASGTI 1176
EG + ++S W S K++K+G I K RLVA+GF Q V+Y + +P P++ASIK++LAVAN+ G H DVKQA+T A LD V +KLP GCG+ S K + ++A+YGLKQSG W + LV + EQCK DPCVFR + + VV+I+ ++VDD +L +LN+ F T +LGE +F GCA+ +D E G +I+Q +I+++ +RFDV +T+R PA+ GA+ G ++E E GG WP +EA+GS++W+ +SRP+++ A RAVA +Y D++YA+ +DRRSVSG+A T+G VS S Q IV+LS+TEAE +A G+GVKE LF ++V SF+ P S +I DN+GAI L N LSS RTKHIDVR+HFIR L SG I
Sbjct: 1176 EGRRPVSSKWCFSWKTNKEGKIDTFKARLVARGFSQIPNVDYFHSSSPCPSSASIKLMLAVANEKGMNLNHWDVKQAYTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVE-NGFEQCKADPCVFRKMVDQVVVMIIVIYVDDILVAGSDEDCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPKREDEEGGEWPVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITYQRGSGLGLAVYVDASYADT-EDRRSVSGLATTVGGTVVSHGSKTQSIVSLSSTEAEYIAAGEGVKEALFVRAVLSFVAPETSGSSIKVLEDNQGAIALVQNPLSSGRTKHIDVRYHFIRGLFRSGDI 1609
BLAST of mRNA_C-linearis_contig107.1054.1 vs. uniprot
Match: A0A6H5KF60_9PHAE (Uncharacterized protein n=12 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KF60_9PHAE) HSP 1 Score: 344 bits (882), Expect = 5.440e-103 Identity = 191/436 (43.81%), Postives = 267/436 (61.24%), Query Frame = 1
Query: 22 EGEKAINSGWVLSLKSDKDGSITKPKGRLVAKGFMQREGVNYNQTFAPTPAAASIKIVLAVANQMGYKTYHLDVKQAFTQADLDCRVVMKLPGGCGELSGKYVELKKALYGLKQSGLLWNDLLVEKLVNVHKMEQCKTDPCVFRLIREGKVVLILTVHVDD-----------KLFVTLNRDFTTVDLGELSFFTGCAVIQDTEKGVTKINQKTFIETLAKRFDVTTTARYPASVGANQGARQEGEPGGTWPYKEAMGSLLWLVVWSRPEIANATRAVA----------------------------------------LYTDSNYAEKADDRRSVSGVAVTLGNATVSWISSAQKIVTLSTTEAECVALGDGVKETLFAKSVASFLVPSLSEKTITAFVDNEGAINLASNSLSSARTKHIDVRFHFIRELVASGTI 1176
EG + ++S W S K++K+G I K RLVA+GF Q V+Y + +P P++ASIK++LAVAN+ G H DVKQA+T A LD V +KLP GCG+ S K + ++A+YGLKQSG W + LV + EQCK DPCVFR + + VV+I+ ++VDD +L +LN+ F T +LGE +F GCA+ +D E G +I+Q +I+++ +RFDV +T+R PA+ GA+ G ++E E GG WP +EA+GS++W+ +SRP+++ A RAVA +Y D++YA+ +DRRSVSG+A T+G VS S Q IV+LS+TEAE +A G+GVKE LF ++V SF+ P S +I DN+GAI L N LSS RTKHIDVR+HFIR L SG I
Sbjct: 1319 EGRRPVSSKWCFSWKTNKEGKIDTFKARLVARGFSQIPNVDYFHSSSPCPSSASIKLMLAVANEKGMNLNHWDVKQAYTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVE-NGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDEDCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPKREDEEGGEWPVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITYQRGSGLGLAVYVDASYADT-EDRRSVSGLATTVGGTVVSHGSKTQSIVSLSSTEAEYIAAGEGVKEALFVRAVLSFVAPETSGSSIKVLEDNQGAIALVQNPLSSGRTKHIDVRYHFIRGLFRSGDI 1752
BLAST of mRNA_C-linearis_contig107.1054.1 vs. uniprot
Match: A0A6H5JC10_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JC10_9PHAE) HSP 1 Score: 320 bits (821), Expect = 4.940e-99 Identity = 186/443 (41.99%), Postives = 263/443 (59.37%), Query Frame = 1
Query: 22 EGEKAINSGWVLSLKSDKDGSITKPKGRLVAKGFMQREGVNYNQTFAPTPAAASIKIVLAVANQMGYKTYHLDVKQAFTQADLDCRVVMKLPGGCGELSGKYVELKKALYGLKQSGLLWNDLLVEKLVNVHKMEQCKTDPCVFRLIREGKVVLILTVHVDD-----------KLFVTLNRDFTTVDLGELSFFTGCAVIQDTEKGVTKINQKTFIETLAKRFDVTTTARYPASVGANQGARQEGEPGGTWPYKEAMGSLLWLVVWSRPEIANATRAVA----------------------------------------LYTDSNYAEKADDRRSVSGVAVTLGNATVSWISSAQKIVTLSTT-------EAECVALGDGVKETLFAKSVASFLVPSLSEKTITAFVDNEGAINLASNSLSSARTKHIDVRFHFIRELVASGTI 1176
EG + ++S W S K++K+G I K RLVA+GF Q V+Y + +P P++ASIK++LAVAN+ G H DVKQA+T A LD V +KLP GCG+ S + + ++A+YGLKQSG W + LV + EQCK DPCVFR + + VV+I+ ++VDD +L +L++ F T +L E +F GCA+ +D E G +I+Q +I+++ KRFDV +T+R PAS G + G +++ E GG WP +EA+GS++W+ +SRP+++ A RAVA +Y D++YA+ +DRRSVSG+A T+G VS S Q IV+LS+T EAE G+ VKE LF ++V SF+ P S +I +DN+GA+ L N LSS RTKHIDVRFHFIR L SG I
Sbjct: 331 EGRRPVSSKWCFSWKTNKEGKIDTFKARLVARGFSQIPNVDYFHSSSPCPSSASIKLMLAVANEKGMNLNHWDVKQAYTHATLDEEVFLKLPAGCGDKSHEIAKAERAIYGLKQSGRQWGYHAADTLVE-NGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDEDCEELLASLSKKFPTKNLEECQWFDGCAIERDVETGTLRISQTAYIDSMVKRFDVQSTSRIPASPGVDLGPKRDDEKGGEWPVREAIGSIMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITYQRGSGLGLAVYVDASYADT-EDRRSVSGLATTVGGTVVSHGSKTQSIVSLSSTXXXXXXTEAEYFTAGECVKEALFVRAVLSFVAPETSGSSIQV-LDNQGAMALVQNPLSSGRTKHIDVRFHFIRVLFRSGDI 770
BLAST of mRNA_C-linearis_contig107.1054.1 vs. uniprot
Match: A0A6H5JV80_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV80_9PHAE) HSP 1 Score: 314 bits (804), Expect = 3.080e-97 Identity = 181/440 (41.14%), Postives = 250/440 (56.82%), Query Frame = 1
Query: 16 VQEGEKAINSGWVLSLKSDKDGSITKPKGRLVAKGFMQREGVNYNQTFAPTPAAASIKIVLAVANQMGYKTYHLDVKQAFTQADLDCRVVMKLPGGCGELSGKYVELKKALYGLKQSGLLWNDLLVEKLVNVHKMEQCKTDPCVFRLIREGKVVLILTVHVDDKLFVTLNR-----------DFTTVDLGELSFFTGCAVIQDTEKGVTKINQKTFIETLAKRFDVTTTARYPASVGANQGARQEGEPGGTWPYKEAMGSLLWLVVWSRPEIANATRAVA------------------------------------------LYTDSNYAEKADDRRSVSGVAVTLGNATVSWISSAQKIVTLSTTEAECVALGDGVKETLFAKSVASFLVPSLSEKTITAFVDNEGAINLASNSLSSARTKHIDVRFHFIRELVASGTI 1176
+ EG I++ WV K+D+ G I K K RLVAKGF Q+ GV+Y +TF+PT AASI++V+A+A + + HLD++QAF Q+ LD V+MKLP GC +SGK V L K+LYGLKQ+ + LV L+ + EQ +DPCV R + +V+ I+ +HVDD L+ R T +LGE+ FF GCA +D E G +I+Q+++I ++ +RF++ T+ PAS + + E E G P++E +G L+W+ +RPE +NA R VA +Y D+++A KA DRRSVSG V + VSW S QK V+LST+EAE +A+GDGVKE LF + L PS + I F DNEGAI LA N LSS+R+KHIDVR HF+R L G I
Sbjct: 251 IPEGCNVIDARWVFKWKADETGKIVKAKARLVAKGFKQKHGVDYLETFSPTANAASIRLVVALACKYNLELLHLDIEQAFFQSKLDHEVLMKLPPGCDSMSGKIVRLNKSLYGLKQASRTFYKRLVSDLLRIG-FEQSLSDPCVLRFMMGDEVMGIIAIHVDDILYAGTKRLAEVIVEALGDSLPTKNLGEVRFFLGCAFSRDREAGTIEISQESYIRSVLERFNICRTSSIPASPANDSRSVMEDEEAGDVPFREVVGCLMWIANNTRPETSNAVRTVARHSHEPKKSDWKAAQKILSYLKETAHLTLKYKQDTTVDVGTLVYVDADFASKATDRRSVSGALVLVAGCLVSWFSWTQKCVSLSTSEAEYIAMGDGVKEALFVNGMLQLLRPSAKPRKIDVFEDNEGAIALAENPLSSSRSKHIDVRHHFLRNLTEEGVI 689
BLAST of mRNA_C-linearis_contig107.1054.1 vs. uniprot
Match: A0A6H5LGF7_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LGF7_9PHAE) HSP 1 Score: 326 bits (836), Expect = 9.540e-97 Identity = 194/436 (44.50%), Postives = 264/436 (60.55%), Query Frame = 1
Query: 25 GEKAINSGWVLSLKSDKDGSITKPKGRLVAKGFMQREGVNYNQTFAPTPAAASIKIVLAVANQMGYKTYHLDVKQAFTQADLDCRVVMKLPGGCGELSGKYVELKKALYGLKQSGLLWNDLLVEKLVNVHKMEQCKTDPCVFRLIREGKVVL--------ILTVHVDD---KLFVTLNRDFTTVDLGELSFFTGCAVIQDTEKGVT-KINQKTFIETLAKRFDVTTTARYPASVGANQGARQEGEPGGTWPYKEAMGSLLWLVVWSRPEIANATRAVA----------------------------------------LYTDSNYAEKADDRRSVSGVAVTLGNATVSWISSAQKIVTLSTTEAECVALGDGVKETLFAKSVASFLVPSLSEKTITAFVDNEGAINLASNSLSSARTKHIDVRFHFIRELVASGTI 1176
G K ++S W + K++KDG I K K RLVA+GF Q V+Y + +P P++ASIK++LAVAN+ K H DVKQAFT A LD V ++LP GCGE S K V+ ++A+YGLKQSG W + LV + EQCK DPCVFR +++ V IL DD +L +LN+ F T DLGE +F GCAV +D E G+T +I+Q +I+ + RFDV +T+ PAS G + G +++ E GG WP +EA+GS++W+ +SRP+I+ A RAVA +Y D++YA+ A+DRRSVSG+A T+G +S S Q IV+LS+TEAE +A G+GVKE LF ++V SF+ P S +I DN+GA+ L N LSSAR+KHIDVR+HFIR L SG I
Sbjct: 1430 GLKPVSSKWRFTWKTNKDGKIEKFKARLVARGFSQIPNVDYFHSSSPCPSSASIKLMLAVANEKSLKLNHWDVKQAFTHAKLDEDVFLRLPAGCGEKSHKVVKAERAIYGLKQSGRQWGYHAADTLVE-NGFEQCKADPCVFRKMKDDVVXXXXXXXXDXILVAGSDDDCKELLASLNKAFPTKDLGECVWFDGCAVERDLEAGMTLRISQTAYID-IVNRFDVQSTSSIPASPGVDIGPKRDDESGGEWPVREAIGSMMWVSTFSRPDISFAVRAVARHAHAPAERHWKAIVKILAYLKETRDLGITYERGSGLGLEVYVDASYAD-AEDRRSVSGLATTVGGTVISHGSKTQAIVSLSSTEAEYIAAGEGVKEALFVRAVLSFIAPETSGSSIQVLEDNQGAMALVQNPLSSARSKHIDVRYHFIRGLFRSGDI 1862
BLAST of mRNA_C-linearis_contig107.1054.1 vs. uniprot
Match: A0A6H5JQN6_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQN6_9PHAE) HSP 1 Score: 311 bits (798), Expect = 3.470e-95 Identity = 180/433 (41.57%), Postives = 255/433 (58.89%), Query Frame = 1
Query: 25 GEKAINSGWVLSLKSDKDGSITKPKGRLVAKGFMQREGVNYNQTFAPTPAAASIKIVLAVANQMGYKTYHLDVKQAFTQADLDCRVVMKLPGGCGELSGKYVELKKALYGLKQSGLLWNDLLVEKLVNVHKMEQCKTDPCVFRLIREGKVVLILTVHVDD-----------KLFVTLNRDFTTVDLGELSFFTGCAVIQDTEKGVTKINQKTFIETLAKRFDVTTTARYPASVGANQGARQEGEPGGTWPYKEAMGSLLWLVVWSRPEIANATRAVA----------------------------------------LYTDSNYAEKADDRRSVSGVAVTLGNATVSWISSAQKIVTLSTTEAECVALGDGVKETLFAKSVASFLVPSLSEKTITAFVDNEGAINLASNSLSSARTKHIDVRFHFIRELVASG 1170
G+ I W K++K+G I K R VA+GF Q + + +P P++ASIK++LAVAN+ G H DVKQA+T A LD V +KLP GCG+ S K + ++A+YGLKQSG W + LV + EQCK DPCVFR + + VV+I+ ++VDD +L +LN+ F T +LGE +F GCA+ +D + G +I+Q +I+++ +RFDV +T+R PA+ GA+ G ++E + GG WP +EA+GS++W+ +SRP+++ A RAVA +Y D+ YA+ +DRRSVS +A T+G VS S A+ IV+LS+TEAE +A G+GVKE LF ++V SF+ P +I DN+GAI L N LSS KHIDVRFHFIR L SG
Sbjct: 373 GDVFIRRRW----KTNKEGKIDTLKARRVARGFSQITSIISIPSSSPCPSSASIKLMLAVANEKGMNLNHWDVKQAYTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVE-NGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDEDCEELLASLNKKFPTKNLGECQWFDGCAIERDVDAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPKREDDKGGEWPVREAVGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITYQRGSGLGLAVYVDARYADT-EDRRSVSRLATTVGGTVVSHGSKARSIVSLSSTEAEYIAAGEGVKEALFVRAVLSFVAPETRGSSIQVLEDNQGAIALVQNPLSSGGMKHIDVRFHFIRGLFRSG 799
BLAST of mRNA_C-linearis_contig107.1054.1 vs. uniprot
Match: A0A6H5JKS3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKS3_9PHAE) HSP 1 Score: 318 bits (815), Expect = 5.240e-95 Identity = 179/436 (41.06%), Postives = 255/436 (58.49%), Query Frame = 1
Query: 22 EGEKAINSGWVLSLKSDKDGSITKPKGRLVAKGFMQREGVNYNQTFAPTPAAASIKIVLAVANQMGYKTYHLDVKQAFTQADLDCRVVMKLPGGCGELSGKYVELKKALYGLKQSGLLWNDLLVEKLVNVHKMEQCKTDPCVFRLIREGKVVLILTVHVDDKLFV-----------TLNRDFTTVDLGELSFFTGCAVIQDTEKGVTKINQKTFIETLAKRFDVTTTARYPASVGANQGARQEGEPGGTWPYKEAMGSLLWLVVWSRPEIANATRAVA----------------------------------------LYTDSNYAEKADDRRSVSGVAVTLGNATVSWISSAQKIVTLSTTEAECVALGDGVKETLFAKSVASFLVPSLSEKTITAFVDNEGAINLASNSLSSARTKHIDVRFHFIRELVASGTI 1176
EG KA+++ WV K+D+ G IT K RLVA+GF Q G +Y+ + + PA +SIK+ +A A + G T H D+KQA+T A + + +++ G G ++GK +++++ALYGLKQSG W LV+ EQC+ DPCVFR I +GKVV I+ ++VDD ++V +L + DLGE +++ GCA+ +D E G T ++QK +I L RF +TTTA PA A G +++ EPG P ++A+G L+W ++RP+IA A AV +Y D++YA++ RRSV+G+AVT+G VS S Q+IV+LST+EAE +A G+GVKE LF ++V SF+ P S I DN+GAI+L N SSAR+KHIDVRFHFIREL SG I
Sbjct: 776 EGRKAVSTKWVFDYKTDEKGLITDFKARLVARGFSQVHGQDYHHSSSACPAVSSIKLAMAFATEGGLPTRHFDIKQAYTHAKIQEELYVRIADGSGAMAGKVLKVERALYGLKQSGREWGFEAANILVD-SGYEQCRADPCVFRKIVDGKVVSIIVIYVDDIMYVGSEEEGEELLTSLRKTLPVKDLGECTWYDGCAIERDLELGTTTLSQKAYIAGLMDRFGITTTASTPADPNAELGPKRDDEPGVDKPVRQAIGCLMWPATFTRPDIATALNAVQRNAHAPTMRDWKALVQILSYLNATMDLGITYVRGSGLDLEVYVDASYADRDTGRRSVTGIAVTVGGTVVSHASKTQRIVSLSTSEAEYIAAGEGVKEALFVRAVLSFIAPETSGAKIKVLEDNQGAISLVQNPFSSARSKHIDVRFHFIRELFKSGRI 1210 The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig107.1054.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig107.1054.1 >prot_C-linearis_contig107.1054.1 ID=prot_C-linearis_contig107.1054.1|Name=mRNA_C-linearis_contig107.1054.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=392bp WYCPVVQEGEKAINSGWVLSLKSDKDGSITKPKGRLVAKGFMQREGVNYNback to top mRNA from alignment at C-linearis_contig107:530060..531355+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-linearis_contig107.1054.1 ID=mRNA_C-linearis_contig107.1054.1|Name=mRNA_C-linearis_contig107.1054.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=1296bp|location=Sequence derived from alignment at C-linearis_contig107:530060..531355+ (Chordaria linearis ClinC8C monoicous)back to top Coding sequence (CDS) from alignment at C-linearis_contig107:530060..531355+ >mRNA_C-linearis_contig107.1054.1 ID=mRNA_C-linearis_contig107.1054.1|Name=mRNA_C-linearis_contig107.1054.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=2352bp|location=Sequence derived from alignment at C-linearis_contig107:530060..531355+ (Chordaria linearis ClinC8C monoicous)back to top |