prot_C-linearis_contig107.1054.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig107.1054.1
Unique Nameprot_C-linearis_contig107.1054.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length392
Homology
BLAST of mRNA_C-linearis_contig107.1054.1 vs. uniprot
Match: A0A6H5JCG0_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCG0_9PHAE)

HSP 1 Score: 335 bits (858), Expect = 4.090e-107
Identity = 193/436 (44.27%), Postives = 264/436 (60.55%), Query Frame = 0
Query:    8 EGEKAINSGWVLSLKSDKDGSITKPKGRLVAKGFMQREGVNYNQTFAPTPAAASIKIVLAVANQMGYKTYHLDVKQAFTQADLDCRVVMKLPGGCGELSGKYVELKKALYGLKQSGLLWNDLLVEKLVNVHKMEQCKTDPCVFRLIREGKVVL--------ILTVHVDD---KLFVTLNRDFTTVDLGELSFFTGCAVIQDTEKGVTKINQKTFIETLAKRFDVTTTARYPASVGANQGARQEGEPGGTWPYKEAMGSLLWLVVWSRPEIANATRAVA----------------------------------------LYTDSNYAEKADDRRSVSGVAVTLGNATVSWISSAQKIVTLSTTEAECVALGDGVKETLFAKSVASFLVPSLSEKTITAFVDNEGAINLASNSLSSARTKHIDVRFHFIRELVASGTI 392
            EG + ++S W  + K++KDG I K K RLVA+GF Q   V+Y  + +P P++ASIK++LAVAN+   K  H DVKQAFT A LD  V ++LP GCGE S K V+ ++A+YGLKQSG  W     + LV  +  EQCK DPCVFR +++  V          IL    DD   +L  +LN+ F T DLGE  +F GCAV +D E G  +I+Q  +I+++  RFDV +T+  PAS G + G +++ E GG WP +EA+GS++W+  +SRP+I+ A RAVA                                        +Y D++YA+ A+DRRSVSG+A T+G   +S  S  Q IV+LS+TEAE +A G+GVKE LF ++V SF+ P  S  +I    DN+GA+ L  N LSSAR+KHIDVR+HFIR L  SG I
Sbjct:   40 EGRRPVSSKWRFTWKTNKDGKIEKFKARLVARGFSQIPNVDYFHSSSPCPSSASIKLMLAVANEKSLKLNHWDVKQAFTHAKLDEDVFLRLPAGCGEKSHKVVKAERAIYGLKQSGRQWGYHAADTLVE-NGFEQCKADPCVFRKMKDDVVXXXXXXXXDXILVAGSDDDCKELLASLNKAFPTKDLGECVWFDGCAVERDLEAGTLRISQTAYIDSIVNRFDVQSTSSIPASPGVDIGPKRDDESGGEWPVREAIGSMMWVSTFSRPDISFAVRAVARHAHAPAERHWKAIVKILAYLKETRDLGITYERGSGLGLAVYVDASYAD-AEDRRSVSGLATTVGGTVISHGSKTQAIVSLSSTEAEYIAAGEGVKEALFVRAVLSFIAPETSGSSIQVLEDNQGAMALVQNPLSSARSKHIDVRYHFIRGLFRSGDI 473          
BLAST of mRNA_C-linearis_contig107.1054.1 vs. uniprot
Match: A0A6H5KSG8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSG8_9PHAE)

HSP 1 Score: 344 bits (882), Expect = 1.630e-104
Identity = 191/436 (43.81%), Postives = 267/436 (61.24%), Query Frame = 0
Query:    8 EGEKAINSGWVLSLKSDKDGSITKPKGRLVAKGFMQREGVNYNQTFAPTPAAASIKIVLAVANQMGYKTYHLDVKQAFTQADLDCRVVMKLPGGCGELSGKYVELKKALYGLKQSGLLWNDLLVEKLVNVHKMEQCKTDPCVFRLIREGKVVLILTVHVDD-----------KLFVTLNRDFTTVDLGELSFFTGCAVIQDTEKGVTKINQKTFIETLAKRFDVTTTARYPASVGANQGARQEGEPGGTWPYKEAMGSLLWLVVWSRPEIANATRAVA----------------------------------------LYTDSNYAEKADDRRSVSGVAVTLGNATVSWISSAQKIVTLSTTEAECVALGDGVKETLFAKSVASFLVPSLSEKTITAFVDNEGAINLASNSLSSARTKHIDVRFHFIRELVASGTI 392
            EG + ++S W  S K++K+G I   K RLVA+GF Q   V+Y  + +P P++ASIK++LAVAN+ G    H DVKQA+T A LD  V +KLP GCG+ S K  + ++A+YGLKQSG  W     + LV  +  EQCK DPCVFR + +  VV+I+ ++VDD           +L  +LN+ F T +LGE  +F GCA+ +D E G  +I+Q  +I+++ +RFDV +T+R PA+ GA+ G ++E E GG WP +EA+GS++W+  +SRP+++ A RAVA                                        +Y D++YA+  +DRRSVSG+A T+G   VS  S  Q IV+LS+TEAE +A G+GVKE LF ++V SF+ P  S  +I    DN+GAI L  N LSS RTKHIDVR+HFIR L  SG I
Sbjct:  777 EGRRPVSSKWCFSWKTNKEGKIDTFKARLVARGFSQIPNVDYFHSSSPCPSSASIKLMLAVANEKGMNLNHWDVKQAYTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVE-NGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDEDCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPKREDEEGGEWPVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITYQRGSGLGLAVYVDASYADT-EDRRSVSGLATTVGGTVVSHGSKTQSIVSLSSTEAEYIAAGEGVKEALFVRAVLSFVAPETSGSSIKVLEDNQGAIALVQNPLSSGRTKHIDVRYHFIRGLFRSGDI 1210          
BLAST of mRNA_C-linearis_contig107.1054.1 vs. uniprot
Match: A0A6H5JZQ8_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZQ8_9PHAE)

HSP 1 Score: 344 bits (882), Expect = 3.350e-103
Identity = 191/436 (43.81%), Postives = 267/436 (61.24%), Query Frame = 0
Query:    8 EGEKAINSGWVLSLKSDKDGSITKPKGRLVAKGFMQREGVNYNQTFAPTPAAASIKIVLAVANQMGYKTYHLDVKQAFTQADLDCRVVMKLPGGCGELSGKYVELKKALYGLKQSGLLWNDLLVEKLVNVHKMEQCKTDPCVFRLIREGKVVLILTVHVDD-----------KLFVTLNRDFTTVDLGELSFFTGCAVIQDTEKGVTKINQKTFIETLAKRFDVTTTARYPASVGANQGARQEGEPGGTWPYKEAMGSLLWLVVWSRPEIANATRAVA----------------------------------------LYTDSNYAEKADDRRSVSGVAVTLGNATVSWISSAQKIVTLSTTEAECVALGDGVKETLFAKSVASFLVPSLSEKTITAFVDNEGAINLASNSLSSARTKHIDVRFHFIRELVASGTI 392
            EG + ++S W  S K++K+G I   K RLVA+GF Q   V+Y  + +P P++ASIK++LAVAN+ G    H DVKQA+T A LD  V +KLP GCG+ S K  + ++A+YGLKQSG  W     + LV  +  EQCK DPCVFR + +  VV+I+ ++VDD           +L  +LN+ F T +LGE  +F GCA+ +D E G  +I+Q  +I+++ +RFDV +T+R PA+ GA+ G ++E E GG WP +EA+GS++W+  +SRP+++ A RAVA                                        +Y D++YA+  +DRRSVSG+A T+G   VS  S  Q IV+LS+TEAE +A G+GVKE LF ++V SF+ P  S  +I    DN+GAI L  N LSS RTKHIDVR+HFIR L  SG I
Sbjct: 1156 EGRRPVSSKWCFSWKTNKEGKIDTFKARLVARGFSQIPNVDYFHSSSPCPSSASIKLMLAVANEKGMNLNHWDVKQAYTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVE-NGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDEDCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPKREDEEGGEWPVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITYQRGSGLGLAVYVDASYADT-EDRRSVSGLATTVGGTVVSHGSKTQSIVSLSSTEAEYIAAGEGVKEALFVRAVLSFVAPETSGSSIKVLEDNQGAIALVQNPLSSGRTKHIDVRYHFIRGLFRSGDI 1589          
BLAST of mRNA_C-linearis_contig107.1054.1 vs. uniprot
Match: A0A6H5JN00_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN00_9PHAE)

HSP 1 Score: 344 bits (882), Expect = 4.350e-103
Identity = 191/436 (43.81%), Postives = 267/436 (61.24%), Query Frame = 0
Query:    8 EGEKAINSGWVLSLKSDKDGSITKPKGRLVAKGFMQREGVNYNQTFAPTPAAASIKIVLAVANQMGYKTYHLDVKQAFTQADLDCRVVMKLPGGCGELSGKYVELKKALYGLKQSGLLWNDLLVEKLVNVHKMEQCKTDPCVFRLIREGKVVLILTVHVDD-----------KLFVTLNRDFTTVDLGELSFFTGCAVIQDTEKGVTKINQKTFIETLAKRFDVTTTARYPASVGANQGARQEGEPGGTWPYKEAMGSLLWLVVWSRPEIANATRAVA----------------------------------------LYTDSNYAEKADDRRSVSGVAVTLGNATVSWISSAQKIVTLSTTEAECVALGDGVKETLFAKSVASFLVPSLSEKTITAFVDNEGAINLASNSLSSARTKHIDVRFHFIRELVASGTI 392
            EG + ++S W  S K++K+G I   K RLVA+GF Q   V+Y  + +P P++ASIK++LAVAN+ G    H DVKQA+T A LD  V +KLP GCG+ S K  + ++A+YGLKQSG  W     + LV  +  EQCK DPCVFR + +  VV+I+ ++VDD           +L  +LN+ F T +LGE  +F GCA+ +D E G  +I+Q  +I+++ +RFDV +T+R PA+ GA+ G ++E E GG WP +EA+GS++W+  +SRP+++ A RAVA                                        +Y D++YA+  +DRRSVSG+A T+G   VS  S  Q IV+LS+TEAE +A G+GVKE LF ++V SF+ P  S  +I    DN+GAI L  N LSS RTKHIDVR+HFIR L  SG I
Sbjct: 1176 EGRRPVSSKWCFSWKTNKEGKIDTFKARLVARGFSQIPNVDYFHSSSPCPSSASIKLMLAVANEKGMNLNHWDVKQAYTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVE-NGFEQCKADPCVFRKMVDQVVVMIIVIYVDDILVAGSDEDCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPKREDEEGGEWPVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITYQRGSGLGLAVYVDASYADT-EDRRSVSGLATTVGGTVVSHGSKTQSIVSLSSTEAEYIAAGEGVKEALFVRAVLSFVAPETSGSSIKVLEDNQGAIALVQNPLSSGRTKHIDVRYHFIRGLFRSGDI 1609          
BLAST of mRNA_C-linearis_contig107.1054.1 vs. uniprot
Match: A0A6H5KF60_9PHAE (Uncharacterized protein n=12 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KF60_9PHAE)

HSP 1 Score: 344 bits (882), Expect = 5.440e-103
Identity = 191/436 (43.81%), Postives = 267/436 (61.24%), Query Frame = 0
Query:    8 EGEKAINSGWVLSLKSDKDGSITKPKGRLVAKGFMQREGVNYNQTFAPTPAAASIKIVLAVANQMGYKTYHLDVKQAFTQADLDCRVVMKLPGGCGELSGKYVELKKALYGLKQSGLLWNDLLVEKLVNVHKMEQCKTDPCVFRLIREGKVVLILTVHVDD-----------KLFVTLNRDFTTVDLGELSFFTGCAVIQDTEKGVTKINQKTFIETLAKRFDVTTTARYPASVGANQGARQEGEPGGTWPYKEAMGSLLWLVVWSRPEIANATRAVA----------------------------------------LYTDSNYAEKADDRRSVSGVAVTLGNATVSWISSAQKIVTLSTTEAECVALGDGVKETLFAKSVASFLVPSLSEKTITAFVDNEGAINLASNSLSSARTKHIDVRFHFIRELVASGTI 392
            EG + ++S W  S K++K+G I   K RLVA+GF Q   V+Y  + +P P++ASIK++LAVAN+ G    H DVKQA+T A LD  V +KLP GCG+ S K  + ++A+YGLKQSG  W     + LV  +  EQCK DPCVFR + +  VV+I+ ++VDD           +L  +LN+ F T +LGE  +F GCA+ +D E G  +I+Q  +I+++ +RFDV +T+R PA+ GA+ G ++E E GG WP +EA+GS++W+  +SRP+++ A RAVA                                        +Y D++YA+  +DRRSVSG+A T+G   VS  S  Q IV+LS+TEAE +A G+GVKE LF ++V SF+ P  S  +I    DN+GAI L  N LSS RTKHIDVR+HFIR L  SG I
Sbjct: 1319 EGRRPVSSKWCFSWKTNKEGKIDTFKARLVARGFSQIPNVDYFHSSSPCPSSASIKLMLAVANEKGMNLNHWDVKQAYTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVE-NGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDEDCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPKREDEEGGEWPVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITYQRGSGLGLAVYVDASYADT-EDRRSVSGLATTVGGTVVSHGSKTQSIVSLSSTEAEYIAAGEGVKEALFVRAVLSFVAPETSGSSIKVLEDNQGAIALVQNPLSSGRTKHIDVRYHFIRGLFRSGDI 1752          
BLAST of mRNA_C-linearis_contig107.1054.1 vs. uniprot
Match: A0A6H5JC10_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JC10_9PHAE)

HSP 1 Score: 320 bits (821), Expect = 4.940e-99
Identity = 186/443 (41.99%), Postives = 263/443 (59.37%), Query Frame = 0
Query:    8 EGEKAINSGWVLSLKSDKDGSITKPKGRLVAKGFMQREGVNYNQTFAPTPAAASIKIVLAVANQMGYKTYHLDVKQAFTQADLDCRVVMKLPGGCGELSGKYVELKKALYGLKQSGLLWNDLLVEKLVNVHKMEQCKTDPCVFRLIREGKVVLILTVHVDD-----------KLFVTLNRDFTTVDLGELSFFTGCAVIQDTEKGVTKINQKTFIETLAKRFDVTTTARYPASVGANQGARQEGEPGGTWPYKEAMGSLLWLVVWSRPEIANATRAVA----------------------------------------LYTDSNYAEKADDRRSVSGVAVTLGNATVSWISSAQKIVTLSTT-------EAECVALGDGVKETLFAKSVASFLVPSLSEKTITAFVDNEGAINLASNSLSSARTKHIDVRFHFIRELVASGTI 392
            EG + ++S W  S K++K+G I   K RLVA+GF Q   V+Y  + +P P++ASIK++LAVAN+ G    H DVKQA+T A LD  V +KLP GCG+ S +  + ++A+YGLKQSG  W     + LV  +  EQCK DPCVFR + +  VV+I+ ++VDD           +L  +L++ F T +L E  +F GCA+ +D E G  +I+Q  +I+++ KRFDV +T+R PAS G + G +++ E GG WP +EA+GS++W+  +SRP+++ A RAVA                                        +Y D++YA+  +DRRSVSG+A T+G   VS  S  Q IV+LS+T       EAE    G+ VKE LF ++V SF+ P  S  +I   +DN+GA+ L  N LSS RTKHIDVRFHFIR L  SG I
Sbjct:  331 EGRRPVSSKWCFSWKTNKEGKIDTFKARLVARGFSQIPNVDYFHSSSPCPSSASIKLMLAVANEKGMNLNHWDVKQAYTHATLDEEVFLKLPAGCGDKSHEIAKAERAIYGLKQSGRQWGYHAADTLVE-NGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDEDCEELLASLSKKFPTKNLEECQWFDGCAIERDVETGTLRISQTAYIDSMVKRFDVQSTSRIPASPGVDLGPKRDDEKGGEWPVREAIGSIMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITYQRGSGLGLAVYVDASYADT-EDRRSVSGLATTVGGTVVSHGSKTQSIVSLSSTXXXXXXTEAEYFTAGECVKEALFVRAVLSFVAPETSGSSIQV-LDNQGAMALVQNPLSSGRTKHIDVRFHFIRVLFRSGDI 770          
BLAST of mRNA_C-linearis_contig107.1054.1 vs. uniprot
Match: A0A6H5JV80_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV80_9PHAE)

HSP 1 Score: 314 bits (804), Expect = 3.080e-97
Identity = 181/440 (41.14%), Postives = 250/440 (56.82%), Query Frame = 0
Query:    6 VQEGEKAINSGWVLSLKSDKDGSITKPKGRLVAKGFMQREGVNYNQTFAPTPAAASIKIVLAVANQMGYKTYHLDVKQAFTQADLDCRVVMKLPGGCGELSGKYVELKKALYGLKQSGLLWNDLLVEKLVNVHKMEQCKTDPCVFRLIREGKVVLILTVHVDDKLFVTLNR-----------DFTTVDLGELSFFTGCAVIQDTEKGVTKINQKTFIETLAKRFDVTTTARYPASVGANQGARQEGEPGGTWPYKEAMGSLLWLVVWSRPEIANATRAVA------------------------------------------LYTDSNYAEKADDRRSVSGVAVTLGNATVSWISSAQKIVTLSTTEAECVALGDGVKETLFAKSVASFLVPSLSEKTITAFVDNEGAINLASNSLSSARTKHIDVRFHFIRELVASGTI 392
            + EG   I++ WV   K+D+ G I K K RLVAKGF Q+ GV+Y +TF+PT  AASI++V+A+A +   +  HLD++QAF Q+ LD  V+MKLP GC  +SGK V L K+LYGLKQ+   +   LV  L+ +   EQ  +DPCV R +   +V+ I+ +HVDD L+    R              T +LGE+ FF GCA  +D E G  +I+Q+++I ++ +RF++  T+  PAS   +  +  E E  G  P++E +G L+W+   +RPE +NA R VA                                          +Y D+++A KA DRRSVSG  V +    VSW S  QK V+LST+EAE +A+GDGVKE LF   +   L PS   + I  F DNEGAI LA N LSS+R+KHIDVR HF+R L   G I
Sbjct:  251 IPEGCNVIDARWVFKWKADETGKIVKAKARLVAKGFKQKHGVDYLETFSPTANAASIRLVVALACKYNLELLHLDIEQAFFQSKLDHEVLMKLPPGCDSMSGKIVRLNKSLYGLKQASRTFYKRLVSDLLRIG-FEQSLSDPCVLRFMMGDEVMGIIAIHVDDILYAGTKRLAEVIVEALGDSLPTKNLGEVRFFLGCAFSRDREAGTIEISQESYIRSVLERFNICRTSSIPASPANDSRSVMEDEEAGDVPFREVVGCLMWIANNTRPETSNAVRTVARHSHEPKKSDWKAAQKILSYLKETAHLTLKYKQDTTVDVGTLVYVDADFASKATDRRSVSGALVLVAGCLVSWFSWTQKCVSLSTSEAEYIAMGDGVKEALFVNGMLQLLRPSAKPRKIDVFEDNEGAIALAENPLSSSRSKHIDVRHHFLRNLTEEGVI 689          
BLAST of mRNA_C-linearis_contig107.1054.1 vs. uniprot
Match: A0A6H5LGF7_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LGF7_9PHAE)

HSP 1 Score: 326 bits (836), Expect = 9.540e-97
Identity = 194/436 (44.50%), Postives = 264/436 (60.55%), Query Frame = 0
Query:    9 GEKAINSGWVLSLKSDKDGSITKPKGRLVAKGFMQREGVNYNQTFAPTPAAASIKIVLAVANQMGYKTYHLDVKQAFTQADLDCRVVMKLPGGCGELSGKYVELKKALYGLKQSGLLWNDLLVEKLVNVHKMEQCKTDPCVFRLIREGKVVL--------ILTVHVDD---KLFVTLNRDFTTVDLGELSFFTGCAVIQDTEKGVT-KINQKTFIETLAKRFDVTTTARYPASVGANQGARQEGEPGGTWPYKEAMGSLLWLVVWSRPEIANATRAVA----------------------------------------LYTDSNYAEKADDRRSVSGVAVTLGNATVSWISSAQKIVTLSTTEAECVALGDGVKETLFAKSVASFLVPSLSEKTITAFVDNEGAINLASNSLSSARTKHIDVRFHFIRELVASGTI 392
            G K ++S W  + K++KDG I K K RLVA+GF Q   V+Y  + +P P++ASIK++LAVAN+   K  H DVKQAFT A LD  V ++LP GCGE S K V+ ++A+YGLKQSG  W     + LV  +  EQCK DPCVFR +++  V          IL    DD   +L  +LN+ F T DLGE  +F GCAV +D E G+T +I+Q  +I+ +  RFDV +T+  PAS G + G +++ E GG WP +EA+GS++W+  +SRP+I+ A RAVA                                        +Y D++YA+ A+DRRSVSG+A T+G   +S  S  Q IV+LS+TEAE +A G+GVKE LF ++V SF+ P  S  +I    DN+GA+ L  N LSSAR+KHIDVR+HFIR L  SG I
Sbjct: 1430 GLKPVSSKWRFTWKTNKDGKIEKFKARLVARGFSQIPNVDYFHSSSPCPSSASIKLMLAVANEKSLKLNHWDVKQAFTHAKLDEDVFLRLPAGCGEKSHKVVKAERAIYGLKQSGRQWGYHAADTLVE-NGFEQCKADPCVFRKMKDDVVXXXXXXXXDXILVAGSDDDCKELLASLNKAFPTKDLGECVWFDGCAVERDLEAGMTLRISQTAYID-IVNRFDVQSTSSIPASPGVDIGPKRDDESGGEWPVREAIGSMMWVSTFSRPDISFAVRAVARHAHAPAERHWKAIVKILAYLKETRDLGITYERGSGLGLEVYVDASYAD-AEDRRSVSGLATTVGGTVISHGSKTQAIVSLSSTEAEYIAAGEGVKEALFVRAVLSFIAPETSGSSIQVLEDNQGAMALVQNPLSSARSKHIDVRYHFIRGLFRSGDI 1862          
BLAST of mRNA_C-linearis_contig107.1054.1 vs. uniprot
Match: A0A6H5JQN6_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQN6_9PHAE)

HSP 1 Score: 311 bits (798), Expect = 3.470e-95
Identity = 180/433 (41.57%), Postives = 255/433 (58.89%), Query Frame = 0
Query:    9 GEKAINSGWVLSLKSDKDGSITKPKGRLVAKGFMQREGVNYNQTFAPTPAAASIKIVLAVANQMGYKTYHLDVKQAFTQADLDCRVVMKLPGGCGELSGKYVELKKALYGLKQSGLLWNDLLVEKLVNVHKMEQCKTDPCVFRLIREGKVVLILTVHVDD-----------KLFVTLNRDFTTVDLGELSFFTGCAVIQDTEKGVTKINQKTFIETLAKRFDVTTTARYPASVGANQGARQEGEPGGTWPYKEAMGSLLWLVVWSRPEIANATRAVA----------------------------------------LYTDSNYAEKADDRRSVSGVAVTLGNATVSWISSAQKIVTLSTTEAECVALGDGVKETLFAKSVASFLVPSLSEKTITAFVDNEGAINLASNSLSSARTKHIDVRFHFIRELVASG 390
            G+  I   W    K++K+G I   K R VA+GF Q   +    + +P P++ASIK++LAVAN+ G    H DVKQA+T A LD  V +KLP GCG+ S K  + ++A+YGLKQSG  W     + LV  +  EQCK DPCVFR + +  VV+I+ ++VDD           +L  +LN+ F T +LGE  +F GCA+ +D + G  +I+Q  +I+++ +RFDV +T+R PA+ GA+ G ++E + GG WP +EA+GS++W+  +SRP+++ A RAVA                                        +Y D+ YA+  +DRRSVS +A T+G   VS  S A+ IV+LS+TEAE +A G+GVKE LF ++V SF+ P     +I    DN+GAI L  N LSS   KHIDVRFHFIR L  SG
Sbjct:  373 GDVFIRRRW----KTNKEGKIDTLKARRVARGFSQITSIISIPSSSPCPSSASIKLMLAVANEKGMNLNHWDVKQAYTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVE-NGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDEDCEELLASLNKKFPTKNLGECQWFDGCAIERDVDAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPKREDDKGGEWPVREAVGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITYQRGSGLGLAVYVDARYADT-EDRRSVSRLATTVGGTVVSHGSKARSIVSLSSTEAEYIAAGEGVKEALFVRAVLSFVAPETRGSSIQVLEDNQGAIALVQNPLSSGGMKHIDVRFHFIRGLFRSG 799          
BLAST of mRNA_C-linearis_contig107.1054.1 vs. uniprot
Match: A0A6H5JKS3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKS3_9PHAE)

HSP 1 Score: 318 bits (815), Expect = 5.240e-95
Identity = 179/436 (41.06%), Postives = 255/436 (58.49%), Query Frame = 0
Query:    8 EGEKAINSGWVLSLKSDKDGSITKPKGRLVAKGFMQREGVNYNQTFAPTPAAASIKIVLAVANQMGYKTYHLDVKQAFTQADLDCRVVMKLPGGCGELSGKYVELKKALYGLKQSGLLWNDLLVEKLVNVHKMEQCKTDPCVFRLIREGKVVLILTVHVDDKLFV-----------TLNRDFTTVDLGELSFFTGCAVIQDTEKGVTKINQKTFIETLAKRFDVTTTARYPASVGANQGARQEGEPGGTWPYKEAMGSLLWLVVWSRPEIANATRAVA----------------------------------------LYTDSNYAEKADDRRSVSGVAVTLGNATVSWISSAQKIVTLSTTEAECVALGDGVKETLFAKSVASFLVPSLSEKTITAFVDNEGAINLASNSLSSARTKHIDVRFHFIRELVASGTI 392
            EG KA+++ WV   K+D+ G IT  K RLVA+GF Q  G +Y+ + +  PA +SIK+ +A A + G  T H D+KQA+T A +   + +++  G G ++GK +++++ALYGLKQSG  W       LV+    EQC+ DPCVFR I +GKVV I+ ++VDD ++V           +L +     DLGE +++ GCA+ +D E G T ++QK +I  L  RF +TTTA  PA   A  G +++ EPG   P ++A+G L+W   ++RP+IA A  AV                                         +Y D++YA++   RRSV+G+AVT+G   VS  S  Q+IV+LST+EAE +A G+GVKE LF ++V SF+ P  S   I    DN+GAI+L  N  SSAR+KHIDVRFHFIREL  SG I
Sbjct:  776 EGRKAVSTKWVFDYKTDEKGLITDFKARLVARGFSQVHGQDYHHSSSACPAVSSIKLAMAFATEGGLPTRHFDIKQAYTHAKIQEELYVRIADGSGAMAGKVLKVERALYGLKQSGREWGFEAANILVD-SGYEQCRADPCVFRKIVDGKVVSIIVIYVDDIMYVGSEEEGEELLTSLRKTLPVKDLGECTWYDGCAIERDLELGTTTLSQKAYIAGLMDRFGITTTASTPADPNAELGPKRDDEPGVDKPVRQAIGCLMWPATFTRPDIATALNAVQRNAHAPTMRDWKALVQILSYLNATMDLGITYVRGSGLDLEVYVDASYADRDTGRRSVTGIAVTVGGTVVSHASKTQRIVSLSTSEAEYIAAGEGVKEALFVRAVLSFIAPETSGAKIKVLEDNQGAISLVQNPFSSARSKHIDVRFHFIRELFKSGRI 1210          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig107.1054.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JCG0_9PHAE4.090e-10744.27Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KSG8_9PHAE1.630e-10443.81Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JZQ8_9PHAE3.350e-10343.81Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JN00_9PHAE4.350e-10343.81Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KF60_9PHAE5.440e-10343.81Uncharacterized protein n=12 Tax=Ectocarpus sp. CC... [more]
A0A6H5JC10_9PHAE4.940e-9941.99Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JV80_9PHAE3.080e-9741.14Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5LGF7_9PHAE9.540e-9744.50Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JQN6_9PHAE3.470e-9541.57Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JKS3_9PHAE5.240e-9541.06Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 9..223
e-value: 3.0E-37
score: 128.6
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 8..330
NoneNo IPR availablePANTHERPTHR11439:SF273coord: 8..330

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig107contigC-linearis_contig107:530060..531355 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig107.1054.1mRNA_C-linearis_contig107.1054.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig107 530060..531355 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig107.1054.1 ID=prot_C-linearis_contig107.1054.1|Name=mRNA_C-linearis_contig107.1054.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=392bp
WYCPVVQEGEKAINSGWVLSLKSDKDGSITKPKGRLVAKGFMQREGVNYN
QTFAPTPAAASIKIVLAVANQMGYKTYHLDVKQAFTQADLDCRVVMKLPG
GCGELSGKYVELKKALYGLKQSGLLWNDLLVEKLVNVHKMEQCKTDPCVF
RLIREGKVVLILTVHVDDKLFVTLNRDFTTVDLGELSFFTGCAVIQDTEK
GVTKINQKTFIETLAKRFDVTTTARYPASVGANQGARQEGEPGGTWPYKE
AMGSLLWLVVWSRPEIANATRAVALYTDSNYAEKADDRRSVSGVAVTLGN
ATVSWISSAQKIVTLSTTEAECVALGDGVKETLFAKSVASFLVPSLSEKT
ITAFVDNEGAINLASNSLSSARTKHIDVRFHFIRELVASGTI
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2
IPR039537Retrotran_Ty1/copia-like