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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 2 |
| Model size | 251 |
| Cds size | 249 |
| Stop | 0 |
| Start | 0 |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622927397.8268507-CDS-C-linearis_contig106:119553..119604 | 1622927397.8268507-CDS-C-linearis_contig106:119553..119604 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig106 119554..119604 + |
| 1690879676.755606-CDS-C-linearis_contig106:119553..119604 | 1690879676.755606-CDS-C-linearis_contig106:119553..119604 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig106 119554..119604 + |
| 1622927397.8385503-CDS-C-linearis_contig106:121750..121948 | 1622927397.8385503-CDS-C-linearis_contig106:121750..121948 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig106 121751..121948 + |
| 1690879676.7677505-CDS-C-linearis_contig106:121750..121948 | 1690879676.7677505-CDS-C-linearis_contig106:121750..121948 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig106 121751..121948 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig106.974.1 >prot_C-linearis_contig106.974.1 ID=prot_C-linearis_contig106.974.1|Name=mRNA_C-linearis_contig106.974.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=83bp
SSRGLRSRNRSCRRHPEEPMPSTRRRRRSTSEQPAQPTNTKLLPLVGLLA
LSSFPHFAAGQRAPTPTPVPAGSRFSGETPAPR back to topmRNA from alignment at C-linearis_contig106:119554..121949+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_C-linearis_contig106.974.1 ID=mRNA_C-linearis_contig106.974.1|Name=mRNA_C-linearis_contig106.974.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=2396bp|location=Sequence derived from alignment at C-linearis_contig106:119554..121949+ (Chordaria linearis ClinC8C monoicous)
TCTTCACGTGGCCTCCGCAGCAGAAACCGTAGCTGCCGCCGCCACCCCGA
GGTAAGAGAGTGAGGAGGTAGCGCACAAGAAGTCCTGGGGCGCTTTTCTT
GTTGCTGTTGTCAAATTTAACTTTGTGTCCACAACTGAGCAACTGAGATG
CCCACACGACAGCTCTTTTGGGTTGAACTGAACCACTTTCTGGTTGGGCA
TTCTCCGACGTGTGTTTGTTGATCACGATGGTTCCGCGAGTGCGAGGCAG
AGAGGGGTCAGATGAGAGATCGTGTGTGTGGCGTGTCTGTTGGTGTTTGT
GTCTATTGTGTGCGTGTGTGCAACATAGAATATGAGAGATGCGTCGAAAA
AGGCCCGTTGTCAACACCAGTTCAACATCCAGTAAGCAGACACCACAACC
AGTAAGCATCGAACACCCACATCACTGCACACCCTTGGGTCATAATCGAG
GGGTGCACAGGCAAGCACCGGTACTAGCTTCTCTTCGGCCCAGTGTGTTG
AGTGGGCCTCGAGAATCAGCACGGCGGAAGTAGTGAACCAAACAGGACAA
ATGTAAATAAAGCATTGGGGGAATATTGTGTAGGTATCTTCTGTGGGCAC
GAGACTAGTCTAGACTACCAATATGTGTCTTGATTTTATCGCTCTGCTGA
CCCTTCGGATCCATTTTATTTTTAGTTCACCTTTTTTAGGGTGAAGTAAA
CTGTGACCACGGGCATTGGCCGTGTCTGTTGGATCAGGACGGACAAAGGG
GGTACTGGTGAAGAGAGACGGGATGGTTTTTTAATTAATGTGAAGACAAC
AACAACAACAACAACAATGAGGTGCCAGGATGTCTGCGACCAGAAATGGC
CAAAAACCCGAAGCCGGGGAAACTAGTTGTCCGCCGGGCAGCGGGTGTAA
TAACCCGAGGTTCTACGTATAGAGCGTGATAGCTCGGAGGGTGTAATAAC
CCACTGCTGGCGTGATAGCCAGGTTGGCGTGATAGCCGTAGATGAACACA
TGCATAGTCTAGGCGTGATAAGCCTTGGCGTGATAGCCAGGTCGGCGTGA
TAACCTGCAGGGTGTAATAACCCAGATAGCTGGCGTGTTAGCCAGTGCTG
GCGTGATAGCCAGGTTGGCGTGATAGCCGATTGATAGACACAGACATAGG
CGTGATAGCCTTGGCGCAATAGCCGGAAAAGGATACCGTATTCTTTATTA
CCTCCACATCAAACACACACACACACACACACACAAACACACACATCACA
GACGCAAGCTCACCGCTCGCGCGTCACACACGCAAACCCGCAACTGAACC
AACCGACGGAAGCACAATAGTAGATGTAGAGATAAGTAGGTGGTAGGCGG
TCGCCCCGGTGGACTATAATAGTGTTTTTTCCTCGAATCCACTAGCAGCA
AAGTCTGGAGTTCAATTCCAAGCAAAGGTGATTATTTTGCGACTTTGCAG
GTGAAAGCGATAACATAGCTGAAAAAGCTCGTGAGTACCAAACTTCGACT
TAGCACGTTGACGAGGGAAAGGGATGGCTGCACCCTTCTCGCGATAAAAT
CCAAGGCAAGCACCGCAGGAGGCAGATGGGGCAAAGAAGAAACAGAAAAA
GATAGGGCTAGGTACTGGCGCAGTGTTTACCCCCTCCTGTGTGACCCCGG
TTGGTTCTAATTGTACAGAAAAATACACTGAACAAGTGTAGTACTCTAAA
TACACCGCAACGTGAAGTACACGTCTCGCCTTGATCGGAAAGGGACTGTC
GCCAAAATAAATGGGACGAAAGCACACACACACACACACACACACCTCAT
ATCCCCATCCAATCCAAACACGAAACAGCAGCACAGTCGTCGTGTCCTGG
AATACGACGTGATATGGATCAAACACCTCTTTTCATGGCAAAGGTGGACC
GCATCGCTCGAATGCGGAGCTACAGCACTACAGCAGTGCCACTTCGACTT
TTTCCCAAACTTGCTGCTGCTACTGCTGCTGCTGCTGCTGCTGCTGCTGC
TGCTGCTGCTGCTGCTGCTGAAGTAATTTTTCCAGTGCCAAAACGATAGG
CAAACTACGAAAAGAACCGTCTGACATTGACAAGGGTGCCTCAATATCTG
CTCTGCTCTGTTGTGGGCACGGATGTGGGTCGTGTTGCCCTGACATCGCC
GCCGCCGCCGCCGCCGTTACCTCTGTTGTGCGCCCAAAACGACCCAGGAA
CCAATGCCCTCCACTCGAAGGCGGCGGCGTTCCACGTCGGAACAACCTGC
GCAGCCGACCAACACCAAGCTACTGCCGCTCGTAGGCCTCCTAGCCCTCT
CGAGCTTCCCCCACTTCGCCGCGGGACAGAGGGCACCTACACCCACCCCG
GTCCCAGCTGGCTCGCGGTTTTCGGGTGAAACACCGGCTCCGAGGC back to topCoding sequence (CDS) from alignment at C-linearis_contig106:119554..121949+ >mRNA_C-linearis_contig106.974.1 ID=mRNA_C-linearis_contig106.974.1|Name=mRNA_C-linearis_contig106.974.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=498bp|location=Sequence derived from alignment at C-linearis_contig106:119554..121949+ (Chordaria linearis ClinC8C monoicous)
TCTTCACGTGGCCTCCGCAGCAGAAACCGTAGCTGCCGCCGCCACCCCGA
GTCTTCACGTGGCCTCCGCAGCAGAAACCGTAGCTGCCGCCGCCACCCCG
AGGAACCAATGCCCTCCACTCGAAGGCGGCGGCGTTCCACGTCGGAACAA
CCTGCGCAGCCGACCAACACCAAGCTACTGCCGCTCGTAGGCCTCCTAGC
CCTCTCGAGCTTCCCCCACTTCGCCGCGGGACAGAGGGCACCTACACCCA
CCCCGGTCCCAGCTGGCTCGCGGTTTTCGGGTGAAACACCGGCTCCGAGG
GAACCAATGCCCTCCACTCGAAGGCGGCGGCGTTCCACGTCGGAACAACC
TGCGCAGCCGACCAACACCAAGCTACTGCCGCTCGTAGGCCTCCTAGCCC
TCTCGAGCTTCCCCCACTTCGCCGCGGGACAGAGGGCACCTACACCCACC
CCGGTCCCAGCTGGCTCGCGGTTTTCGGGTGAAACACCGGCTCCGAGG back to top
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