prot_C-linearis_contig106.974.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig106.974.1
Unique Nameprot_C-linearis_contig106.974.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length83
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig106.974.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 53..60
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 42..52
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 61..83
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..60
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..41

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig106contigC-linearis_contig106:119554..121948 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig106.974.1mRNA_C-linearis_contig106.974.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig106 119554..121949 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig106.974.1 ID=prot_C-linearis_contig106.974.1|Name=mRNA_C-linearis_contig106.974.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=83bp
SSRGLRSRNRSCRRHPEEPMPSTRRRRRSTSEQPAQPTNTKLLPLVGLLA
LSSFPHFAAGQRAPTPTPVPAGSRFSGETPAPR
back to top