mRNA_C-linearis_contig104.919.1 (mRNA) Chordaria linearis ClinC8C monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Homology

BLAST of mRNA_C-linearis_contig104.919.1 vs. uniprot
Match: D8LE99_ECTSI (ATP-dependent Clp protease adaptor protein ClpS n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LE99_ECTSI)

HSP 1 Score: 239 bits (610), Expect = 2.320e-78
Identity = 127/157 (80.89%), Postives = 140/157 (89.17%), Query Frame = 1

Query:   88 MFRPVQGLVLALVAYASTAFVVPSASQTW-AGRPSVTGARTFAKLHMAAGVAMPEIKTAGPSVGLVEKKEVSFETNIRPEDKFKVLLFNDNGNTREYVSRSLVQVVGLSEATAFHIMQQQANDNGMALVGIWHQEMADAYSTSLKERGLIAETHPAD 555
            MFRP+Q L+LALVA ASTAFVVP+    W A RP+    R  + L+MAAGVAMPEIKTAGPS+G+++KKEVSFET+IRPEDK+KVLLFNDNGNTREYVSRSLVQVVGLSEATAFHIMQQ ANDNGMA VGIWHQEMADAYSTSLKERGLIAETHPA+
Sbjct:    1 MFRPLQVLILALVASASTAFVVPA----WTAMRPAAASGRPISALNMAAGVAMPEIKTAGPSIGVLDKKEVSFETSIRPEDKYKVLLFNDNGNTREYVSRSLVQVVGLSEATAFHIMQQ-ANDNGMAQVGIWHQEMADAYSTSLKERGLIAETHPAE 152

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BLAST of mRNA_C-linearis_contig104.919.1 vs. uniprot
Match: A0A835ZJP8_9STRA (ATP-dependent Clp protease adaptor protein ClpS-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZJP8_9STRA)

HSP 1 Score: 106 bits (265), Expect = 2.690e-26
Identity = 52/84 (61.90%), Postives = 65/84 (77.38%), Query Frame = 1

Query:  304 ETNIRPEDKFKVLLFNDNGNTREYVSRSLVQVVGLSEATAFHIMQQQANDNGMALVGIWHQEMADAYSTSLKERGLIAETHPAD 555
            E    P DKFKV+LFNDNGNTREYV+RSLVQV+G++E+ A+ IM   A+ NGMALVGIW+ E A+AYS  LK RGL++E  P +
Sbjct:   51 EDQPSPADKFKVMLFNDNGNTREYVARSLVQVIGMTESDAYDIMTM-AHKNGMALVGIWNLERAEAYSDQLKTRGLVSEIFPVE 133

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BLAST of mRNA_C-linearis_contig104.919.1 vs. uniprot
Match: A0A7S2V4Q9_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V4Q9_9STRA)

HSP 1 Score: 80.9 bits (198), Expect = 5.170e-16
Identity = 42/86 (48.84%), Postives = 56/86 (65.12%), Query Frame = 1

Query:  280 VEKKEVSFETNIRPEDKFKVLLFNDNGNTREYVSRSLVQVVGLSEATAFHIMQQQANDNGMALVGIWHQEMADAYSTSLKERGLIA 537
            +EKK +           +++LLFNDN NTREYV+R L  +VGLSE  AF IM + A+ NGMA+VG W  E+A+AY+ SL   GL +
Sbjct:   69 IEKKGLDNSYQPANGGDYQILLFNDNMNTREYVARCLCTIVGLSEGKAFEIMLE-AHKNGMAVVGSWRYELAEAYNESLNRHGLAS 153

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BLAST of mRNA_C-linearis_contig104.919.1 vs. uniprot
Match: A0A7S2VY96_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2VY96_9STRA)

HSP 1 Score: 78.6 bits (192), Expect = 7.340e-15
Identity = 44/100 (44.00%), Postives = 62/100 (62.00%), Query Frame = 1

Query:  256 TAGPSVGLVEKKEVSFETNIRPEDKFKVLLFNDNGNTREYVSRSLVQVVGLSEATAFHIMQQQANDNGMALVGIWHQEMADAYSTSLKERGLIAETHPAD 555
            + G  VGLVEKK +  +      D ++V ++ND  NTRE+VSR LVQ+VGLSE  A+  M Q A+ NG+A VG +  E A+ Y  +L E G++ +  P D
Sbjct:   85 STGGGVGLVEKKAMK-DRERTGSDAWEVRIYNDVKNTREFVSRCLVQIVGLSETFAYQTMMQ-AHKNGLAAVGTYAFERAEMYHEALTENGIMCDMIPVD 182

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BLAST of mRNA_C-linearis_contig104.919.1 vs. uniprot
Match: A0A0M0LSS8_9EUKA (ATP-dependent clp protease adaptor protein n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0LSS8_9EUKA)

HSP 1 Score: 77.0 bits (188), Expect = 1.510e-14
Identity = 64/156 (41.03%), Postives = 87/156 (55.77%), Query Frame = 1

Query:  109 LVLALVAYASTAFVVPSASQTWAGRPSVTGA---RTFAKLHMAAGVAMPEIKTAGPSVG---LVEKKEVSFETNIRPEDKFKVLLFNDNGNTREYVSRSLVQVV-GLSEATAFHIMQQQANDNGMALVGIWHQEMADAYSTSLKERGLIAETHPAD 555
            +VL  +  +++A VVP+ +      P VT A   RT   L  A  VAM       P V    L   K  S + N + + K+KVLLFNDN N REYV+R LV  + G+S+A A+ +MQ+ A+  GMA+VG+W  E+A+AY   LK  GLIA     D
Sbjct:    9 VVLCGLLGSASALVVPARALM----PEVTPASASRTVLSLRTAR-VAMQVDAPVRPKVDVPQLAPTKPSSDKDNEKAK-KYKVLLFNDNVNRREYVARILVGAIPGMSQADAYLVMQK-AHKQGMAVVGVWVFEVAEAYCDKLKSGGLIASVTEED 157

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BLAST of mRNA_C-linearis_contig104.919.1 vs. uniprot
Match: A0A7S2R9I8_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2R9I8_9STRA)

HSP 1 Score: 76.6 bits (187), Expect = 2.710e-14
Identity = 38/76 (50.00%), Postives = 53/76 (69.74%), Query Frame = 1

Query:  328 KFKVLLFNDNGNTREYVSRSLVQVVGLSEATAFHIMQQQANDNGMALVGIWHQEMADAYSTSLKERGLIAETHPAD 555
            +++VLLFND  NT+EYV+R L+ V GLSE  AF  M Q A+ NGM L+GIW +E+A+ ++ +L E GL+    P D
Sbjct:   92 RYRVLLFNDPMNTKEYVARQLMTVAGLSENNAFDCMMQ-AHRNGMGLIGIWMREVAEHHTQTLTEAGLLVSMMPDD 166

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BLAST of mRNA_C-linearis_contig104.919.1 vs. uniprot
Match: A0A7S4HUU8_9EUKA (Hypothetical protein n=1 Tax=Prymnesium polylepis TaxID=72548 RepID=A0A7S4HUU8_9EUKA)

HSP 1 Score: 74.7 bits (182), Expect = 1.200e-13
Identity = 41/77 (53.25%), Postives = 54/77 (70.13%), Query Frame = 1

Query:  328 KFKVLLFNDNGNTREYVSRSLVQVV-GLSEATAFHIMQQQANDNGMALVGIWHQEMADAYSTSLKERGLIAETHPAD 555
            K+K+LLFNDN N REYV+R LV  V   S+A A+ +MQ+ A+ NGMA+VG+W  E+A+AY   LK+ GLIA     D
Sbjct:   83 KWKLLLFNDNVNKREYVARVLVSSVPDFSQADAYKVMQK-AHQNGMAVVGVWVFEVAEAYCDKLKQGGLIASVTEED 158

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BLAST of mRNA_C-linearis_contig104.919.1 vs. uniprot
Match: A0A6U6GRI4_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A6U6GRI4_9STRA)

HSP 1 Score: 75.1 bits (183), Expect = 1.490e-13
Identity = 42/119 (35.29%), Postives = 69/119 (57.98%), Query Frame = 1

Query:  223 MAAGVAMPEIKTAGPSVGLVEKKEVSFETNIRPE--------DKFKVLLFNDNGNTREYVSRSLVQVVGLSEATAFHIMQQQANDNGMALVGIWHQEMADAYSTSLKERGLIAETHPAD 555
            M A +    +KT G    ++++ +V    +  PE        + ++V ++ND  NTRE+V+R LVQ+VGL+E TA+  M   A+ NG+A+VG +  E A+ Y  +LK+ G+I +  P D
Sbjct:   65 MPATIERAPVKTGGGGPAVLDRPKVEERQSKSPEKERENVGNEAWEVRIYNDGMNTREFVARCLVQIVGLTEMTAYQTMMD-AHQNGIAVVGRYVYERAEMYHEALKKNGIICDLVPVD 182

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BLAST of mRNA_C-linearis_contig104.919.1 vs. uniprot
Match: A0A7S4EG34_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4EG34_9STRA)

HSP 1 Score: 72.8 bits (177), Expect = 6.510e-13
Identity = 42/126 (33.33%), Postives = 77/126 (61.11%), Query Frame = 1

Query:  202 RTFAKLHMAAGVAMPEIKTAGPSVGLVEKKEVSFETNIRPE--------DKFKVLLFNDNGNTREYVSRSLVQVVGLSEATAFHIMQQQANDNGMALVGIWHQEMADAYSTSLKERGLIAETHPAD 555
            RT +  ++A  +A   ++ AGP+V  V++  V  + N+ P         + ++V ++ND  NTRE+V+RSLVQ+ G+ E TA+  M   A+ NG+A VG++  E+A+ Y+   +++G++++  P D
Sbjct:   35 RTSSHSNVAMKMAAGTVERAGPAV--VDRPAV--KKNLAPSKQRHQEGGETWEVRIYNDGDNTREHVARSLVQITGMGEMTAYQTMMT-AHQNGIASVGLFAFEVAEVYNEGFRKQGIVSDIIPID 155

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BLAST of mRNA_C-linearis_contig104.919.1 vs. uniprot
Match: A0A8J5XX93_DIALT (ClpS domain-containing protein n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XX93_DIALT)

HSP 1 Score: 72.4 bits (176), Expect = 6.820e-13
Identity = 43/102 (42.16%), Postives = 64/102 (62.75%), Query Frame = 1

Query:  235 VAMPEIKTAGPSVGLVEKKEVSFETNIRPEDKFKVLLFNDNGNTREYVSRSLVQVV-GLSEATAFHIMQQQANDNGMALVGIWHQEMADAYSTSLKERGLIA 537
            VAM ++ T  PSV L   K  S + N + + K+K+LLFND  N RE+V+R L  V+  ++E TA+ +MQ+ A+  G A+ G+W  E+A+AY   L  +GL A
Sbjct:   39 VAMADVLTRPPSVQLAPTKPSSDQQNAKGK-KYKLLLFNDAVNKREFVARVLTSVIPDMTEPTAYTVMQK-AHTAGFAVCGVWMFELAEAYCDGLTSQGLTA 138

The following BLAST results are available for this feature:

BLAST of mRNA_C-linearis_contig104.919.1 vs. uniprot

BLAST of mRNA_C-linearis_contig104.919.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25

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Match Name	E-value	Identity	Description
D8LE99_ECTSI	2.320e-78	80.89	ATP-dependent Clp protease adaptor protein ClpS n=...	[more]
A0A835ZJP8_9STRA	2.690e-26	61.90	ATP-dependent Clp protease adaptor protein ClpS-do...	[more]
A0A7S2V4Q9_9STRA	5.170e-16	48.84	Hypothetical protein n=1 Tax=Fibrocapsa japonica T...	[more]
A0A7S2VY96_9STRA	7.340e-15	44.00	Hypothetical protein n=1 Tax=Eucampia antarctica T...	[more]
A0A0M0LSS8_9EUKA	1.510e-14	41.03	ATP-dependent clp protease adaptor protein n=1 Tax...	[more]
A0A7S2R9I8_9STRA	2.710e-14	50.00	Hypothetical protein n=1 Tax=Rhizochromulina marin...	[more]
A0A7S4HUU8_9EUKA	1.200e-13	53.25	Hypothetical protein n=1 Tax=Prymnesium polylepis ...	[more]
A0A6U6GRI4_9STRA	1.490e-13	35.29	Hypothetical protein n=1 Tax=Odontella aurita TaxI...	[more]
A0A7S4EG34_9STRA	6.510e-13	33.33	Hypothetical protein n=1 Tax=Pseudo-nitzschia aust...	[more]
A0A8J5XX93_DIALT	6.820e-13	42.16	ClpS domain-containing protein n=2 Tax=Diacronema ...	[more]

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