mRNA_C-linearis_contig104.919.1 (mRNA) Chordaria linearis ClinC8C monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_C-linearis_contig104.919.1
Unique Name	mRNA_C-linearis_contig104.919.1
Type	mRNA
Organism	Chordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)

Homology

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BLAST of mRNA_C-linearis_contig104.919.1 vs. uniprot
Match: D8LE99_ECTSI (ATP-dependent Clp protease adaptor protein ClpS n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LE99_ECTSI)

HSP 1 Score: 239 bits (610), Expect = 2.320e-78
Identity = 127/157 (80.89%), Postives = 140/157 (89.17%), Query Frame = 1

Query:   88 MFRPVQGLVLALVAYASTAFVVPSASQTW-AGRPSVTGARTFAKLHMAAGVAMPEIKTAGPSVGLVEKKEVSFETNIRPEDKFKVLLFNDNGNTREYVSRSLVQVVGLSEATAFHIMQQQANDNGMALVGIWHQEMADAYSTSLKERGLIAETHPAD 555
            MFRP+Q L+LALVA ASTAFVVP+    W A RP+    R  + L+MAAGVAMPEIKTAGPS+G+++KKEVSFET+IRPEDK+KVLLFNDNGNTREYVSRSLVQVVGLSEATAFHIMQQ ANDNGMA VGIWHQEMADAYSTSLKERGLIAETHPA+
Sbjct:    1 MFRPLQVLILALVASASTAFVVPA----WTAMRPAAASGRPISALNMAAGVAMPEIKTAGPSIGVLDKKEVSFETSIRPEDKYKVLLFNDNGNTREYVSRSLVQVVGLSEATAFHIMQQ-ANDNGMAQVGIWHQEMADAYSTSLKERGLIAETHPAE 152

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BLAST of mRNA_C-linearis_contig104.919.1 vs. uniprot
Match: A0A835ZJP8_9STRA (ATP-dependent Clp protease adaptor protein ClpS-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZJP8_9STRA)

HSP 1 Score: 106 bits (265), Expect = 2.690e-26
Identity = 52/84 (61.90%), Postives = 65/84 (77.38%), Query Frame = 1

Query:  304 ETNIRPEDKFKVLLFNDNGNTREYVSRSLVQVVGLSEATAFHIMQQQANDNGMALVGIWHQEMADAYSTSLKERGLIAETHPAD 555
            E    P DKFKV+LFNDNGNTREYV+RSLVQV+G++E+ A+ IM   A+ NGMALVGIW+ E A+AYS  LK RGL++E  P +
Sbjct:   51 EDQPSPADKFKVMLFNDNGNTREYVARSLVQVIGMTESDAYDIMTM-AHKNGMALVGIWNLERAEAYSDQLKTRGLVSEIFPVE 133

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BLAST of mRNA_C-linearis_contig104.919.1 vs. uniprot
Match: A0A7S2V4Q9_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V4Q9_9STRA)

HSP 1 Score: 80.9 bits (198), Expect = 5.170e-16
Identity = 42/86 (48.84%), Postives = 56/86 (65.12%), Query Frame = 1

Query:  280 VEKKEVSFETNIRPEDKFKVLLFNDNGNTREYVSRSLVQVVGLSEATAFHIMQQQANDNGMALVGIWHQEMADAYSTSLKERGLIA 537
            +EKK +           +++LLFNDN NTREYV+R L  +VGLSE  AF IM + A+ NGMA+VG W  E+A+AY+ SL   GL +
Sbjct:   69 IEKKGLDNSYQPANGGDYQILLFNDNMNTREYVARCLCTIVGLSEGKAFEIMLE-AHKNGMAVVGSWRYELAEAYNESLNRHGLAS 153

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BLAST of mRNA_C-linearis_contig104.919.1 vs. uniprot
Match: A0A7S2VY96_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2VY96_9STRA)

HSP 1 Score: 78.6 bits (192), Expect = 7.340e-15
Identity = 44/100 (44.00%), Postives = 62/100 (62.00%), Query Frame = 1

Query:  256 TAGPSVGLVEKKEVSFETNIRPEDKFKVLLFNDNGNTREYVSRSLVQVVGLSEATAFHIMQQQANDNGMALVGIWHQEMADAYSTSLKERGLIAETHPAD 555
            + G  VGLVEKK +  +      D ++V ++ND  NTRE+VSR LVQ+VGLSE  A+  M Q A+ NG+A VG +  E A+ Y  +L E G++ +  P D
Sbjct:   85 STGGGVGLVEKKAMK-DRERTGSDAWEVRIYNDVKNTREFVSRCLVQIVGLSETFAYQTMMQ-AHKNGLAAVGTYAFERAEMYHEALTENGIMCDMIPVD 182

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BLAST of mRNA_C-linearis_contig104.919.1 vs. uniprot
Match: A0A0M0LSS8_9EUKA (ATP-dependent clp protease adaptor protein n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0LSS8_9EUKA)

HSP 1 Score: 77.0 bits (188), Expect = 1.510e-14
Identity = 64/156 (41.03%), Postives = 87/156 (55.77%), Query Frame = 1

Query:  109 LVLALVAYASTAFVVPSASQTWAGRPSVTGA---RTFAKLHMAAGVAMPEIKTAGPSVG---LVEKKEVSFETNIRPEDKFKVLLFNDNGNTREYVSRSLVQVV-GLSEATAFHIMQQQANDNGMALVGIWHQEMADAYSTSLKERGLIAETHPAD 555
            +VL  +  +++A VVP+ +      P VT A   RT   L  A  VAM       P V    L   K  S + N + + K+KVLLFNDN N REYV+R LV  + G+S+A A+ +MQ+ A+  GMA+VG+W  E+A+AY   LK  GLIA     D
Sbjct:    9 VVLCGLLGSASALVVPARALM----PEVTPASASRTVLSLRTAR-VAMQVDAPVRPKVDVPQLAPTKPSSDKDNEKAK-KYKVLLFNDNVNRREYVARILVGAIPGMSQADAYLVMQK-AHKQGMAVVGVWVFEVAEAYCDKLKSGGLIASVTEED 157

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BLAST of mRNA_C-linearis_contig104.919.1 vs. uniprot
Match: A0A7S2R9I8_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2R9I8_9STRA)

HSP 1 Score: 76.6 bits (187), Expect = 2.710e-14
Identity = 38/76 (50.00%), Postives = 53/76 (69.74%), Query Frame = 1

Query:  328 KFKVLLFNDNGNTREYVSRSLVQVVGLSEATAFHIMQQQANDNGMALVGIWHQEMADAYSTSLKERGLIAETHPAD 555
            +++VLLFND  NT+EYV+R L+ V GLSE  AF  M Q A+ NGM L+GIW +E+A+ ++ +L E GL+    P D
Sbjct:   92 RYRVLLFNDPMNTKEYVARQLMTVAGLSENNAFDCMMQ-AHRNGMGLIGIWMREVAEHHTQTLTEAGLLVSMMPDD 166

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BLAST of mRNA_C-linearis_contig104.919.1 vs. uniprot
Match: A0A7S4HUU8_9EUKA (Hypothetical protein n=1 Tax=Prymnesium polylepis TaxID=72548 RepID=A0A7S4HUU8_9EUKA)

HSP 1 Score: 74.7 bits (182), Expect = 1.200e-13
Identity = 41/77 (53.25%), Postives = 54/77 (70.13%), Query Frame = 1

Query:  328 KFKVLLFNDNGNTREYVSRSLVQVV-GLSEATAFHIMQQQANDNGMALVGIWHQEMADAYSTSLKERGLIAETHPAD 555
            K+K+LLFNDN N REYV+R LV  V   S+A A+ +MQ+ A+ NGMA+VG+W  E+A+AY   LK+ GLIA     D
Sbjct:   83 KWKLLLFNDNVNKREYVARVLVSSVPDFSQADAYKVMQK-AHQNGMAVVGVWVFEVAEAYCDKLKQGGLIASVTEED 158

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BLAST of mRNA_C-linearis_contig104.919.1 vs. uniprot
Match: A0A6U6GRI4_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A6U6GRI4_9STRA)

HSP 1 Score: 75.1 bits (183), Expect = 1.490e-13
Identity = 42/119 (35.29%), Postives = 69/119 (57.98%), Query Frame = 1

Query:  223 MAAGVAMPEIKTAGPSVGLVEKKEVSFETNIRPE--------DKFKVLLFNDNGNTREYVSRSLVQVVGLSEATAFHIMQQQANDNGMALVGIWHQEMADAYSTSLKERGLIAETHPAD 555
            M A +    +KT G    ++++ +V    +  PE        + ++V ++ND  NTRE+V+R LVQ+VGL+E TA+  M   A+ NG+A+VG +  E A+ Y  +LK+ G+I +  P D
Sbjct:   65 MPATIERAPVKTGGGGPAVLDRPKVEERQSKSPEKERENVGNEAWEVRIYNDGMNTREFVARCLVQIVGLTEMTAYQTMMD-AHQNGIAVVGRYVYERAEMYHEALKKNGIICDLVPVD 182

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BLAST of mRNA_C-linearis_contig104.919.1 vs. uniprot
Match: A0A7S4EG34_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4EG34_9STRA)

HSP 1 Score: 72.8 bits (177), Expect = 6.510e-13
Identity = 42/126 (33.33%), Postives = 77/126 (61.11%), Query Frame = 1

Query:  202 RTFAKLHMAAGVAMPEIKTAGPSVGLVEKKEVSFETNIRPE--------DKFKVLLFNDNGNTREYVSRSLVQVVGLSEATAFHIMQQQANDNGMALVGIWHQEMADAYSTSLKERGLIAETHPAD 555
            RT +  ++A  +A   ++ AGP+V  V++  V  + N+ P         + ++V ++ND  NTRE+V+RSLVQ+ G+ E TA+  M   A+ NG+A VG++  E+A+ Y+   +++G++++  P D
Sbjct:   35 RTSSHSNVAMKMAAGTVERAGPAV--VDRPAV--KKNLAPSKQRHQEGGETWEVRIYNDGDNTREHVARSLVQITGMGEMTAYQTMMT-AHQNGIASVGLFAFEVAEVYNEGFRKQGIVSDIIPID 155

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BLAST of mRNA_C-linearis_contig104.919.1 vs. uniprot
Match: A0A8J5XX93_DIALT (ClpS domain-containing protein n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XX93_DIALT)

HSP 1 Score: 72.4 bits (176), Expect = 6.820e-13
Identity = 43/102 (42.16%), Postives = 64/102 (62.75%), Query Frame = 1

Query:  235 VAMPEIKTAGPSVGLVEKKEVSFETNIRPEDKFKVLLFNDNGNTREYVSRSLVQVV-GLSEATAFHIMQQQANDNGMALVGIWHQEMADAYSTSLKERGLIA 537
            VAM ++ T  PSV L   K  S + N + + K+K+LLFND  N RE+V+R L  V+  ++E TA+ +MQ+ A+  G A+ G+W  E+A+AY   L  +GL A
Sbjct:   39 VAMADVLTRPPSVQLAPTKPSSDQQNAKGK-KYKLLLFNDAVNKREFVARVLTSVIPDMTEPTAYTVMQK-AHTAGFAVCGVWMFELAEAYCDGLTSQGLTA 138

The following BLAST results are available for this feature:

BLAST of mRNA_C-linearis_contig104.919.1 vs. uniprot

BLAST of mRNA_C-linearis_contig104.919.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25

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POSITION

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Match Name	E-value	Identity	Description
D8LE99_ECTSI	2.320e-78	80.89	ATP-dependent Clp protease adaptor protein ClpS n=...	[more]
A0A835ZJP8_9STRA	2.690e-26	61.90	ATP-dependent Clp protease adaptor protein ClpS-do...	[more]
A0A7S2V4Q9_9STRA	5.170e-16	48.84	Hypothetical protein n=1 Tax=Fibrocapsa japonica T...	[more]
A0A7S2VY96_9STRA	7.340e-15	44.00	Hypothetical protein n=1 Tax=Eucampia antarctica T...	[more]
A0A0M0LSS8_9EUKA	1.510e-14	41.03	ATP-dependent clp protease adaptor protein n=1 Tax...	[more]
A0A7S2R9I8_9STRA	2.710e-14	50.00	Hypothetical protein n=1 Tax=Rhizochromulina marin...	[more]
A0A7S4HUU8_9EUKA	1.200e-13	53.25	Hypothetical protein n=1 Tax=Prymnesium polylepis ...	[more]
A0A6U6GRI4_9STRA	1.490e-13	35.29	Hypothetical protein n=1 Tax=Odontella aurita TaxI...	[more]
A0A7S4EG34_9STRA	6.510e-13	33.33	Hypothetical protein n=1 Tax=Pseudo-nitzschia aust...	[more]
A0A8J5XX93_DIALT	6.820e-13	42.16	ClpS domain-containing protein n=2 Tax=Diacronema ...	[more]

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Relationships

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_C-linearis_contig104.919.1	prot_C-linearis_contig104.919.1	Chordaria linearis ClinC8C monoicous	polypeptide	C-linearis_contig104 511482..515634 -

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1622927389.9821186-CDS-C-linearis_contig104:511481..511598	1622927389.9821186-CDS-C-linearis_contig104:511481..511598	Chordaria linearis ClinC8C monoicous	CDS	C-linearis_contig104 511482..511598 -
1690879671.6566906-CDS-C-linearis_contig104:511481..511598	1690879671.6566906-CDS-C-linearis_contig104:511481..511598	Chordaria linearis ClinC8C monoicous	CDS	C-linearis_contig104 511482..511598 -
1622927389.9937885-CDS-C-linearis_contig104:512376..512487	1622927389.9937885-CDS-C-linearis_contig104:512376..512487	Chordaria linearis ClinC8C monoicous	CDS	C-linearis_contig104 512377..512487 -
1690879671.6672647-CDS-C-linearis_contig104:512376..512487	1690879671.6672647-CDS-C-linearis_contig104:512376..512487	Chordaria linearis ClinC8C monoicous	CDS	C-linearis_contig104 512377..512487 -
1622927390.0044692-CDS-C-linearis_contig104:514575..514692	1622927390.0044692-CDS-C-linearis_contig104:514575..514692	Chordaria linearis ClinC8C monoicous	CDS	C-linearis_contig104 514576..514692 -
1690879671.68256-CDS-C-linearis_contig104:514575..514692	1690879671.68256-CDS-C-linearis_contig104:514575..514692	Chordaria linearis ClinC8C monoicous	CDS	C-linearis_contig104 514576..514692 -
1622927390.0140505-CDS-C-linearis_contig104:515421..515634	1622927390.0140505-CDS-C-linearis_contig104:515421..515634	Chordaria linearis ClinC8C monoicous	CDS	C-linearis_contig104 515422..515634 -
1690879671.6974678-CDS-C-linearis_contig104:515421..515634	1690879671.6974678-CDS-C-linearis_contig104:515421..515634	Chordaria linearis ClinC8C monoicous	CDS	C-linearis_contig104 515422..515634 -

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at C-linearis_contig104:511482..515634-
coding sequence from alignment at C-linearis_contig104:511482..515634-

protein sequence of mRNA_C-linearis_contig104.919.1

>prot_C-linearis_contig104.919.1 ID=prot_C-linearis_contig104.919.1|Name=mRNA_C-linearis_contig104.919.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=186bp
NRSSSSPHHVSANSTTPSTLHAYTRTYTVMFRPVQGLVLALVAYASTAFV
VPSASQTWAGRPSVTGARTFAKLHMAAGVAMPEIKTAGPSVGLVEKKEVS
FETNIRPEDKFKVLLFNDNGNTREYVSRSLVQVVGLSEATAFHIMQQQAN
DNGMALVGIWHQEMADAYSTSLKERGLIAETHPAD*

mRNA from alignment at C-linearis_contig104:511482..515634-

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_C-linearis_contig104.919.1 ID=mRNA_C-linearis_contig104.919.1|Name=mRNA_C-linearis_contig104.919.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=4153bp|location=Sequence derived from alignment at C-linearis_contig104:511482..515634- (Chordaria linearis ClinC8C monoicous)
AATCGCTCTTCTTCGAGTCCACACCACGTTTCCGCAAACAGCACAACGCC
GTCTACACTGCACGCATACACACGCACATACACAGTCATGTTCCGTCCGG
TGCAAGGACTTGTTCTCGCTTTGGTGGCGTACGCATCCACCGCATTCGTC
GTACCGTCGGCTTCGCAAACATGGGCTGGAAGACCTTCAGTCACTGGCGC
GAGAACTTTCGCGGTGAGGCAACAGGCAACAAATCGATAGGCCTCCTCGA
GGGTAGGCTTCGTGTGGTTTCCATGGGGTGGTGGGTGGTAGAAGCGTACA
AGGTTAGCATGCTTGGCGTGGTGGTGGCCTCCCTTTCTGCGGCTTTGCCT
CGGTTTGGTTTCGCAGACAAGTCGGTCAGTTGGGTTGCACTACACAGGGT
GCCGCTGACGTGTTGGTGGGGTTGCTTCCTCTCTCGCGTTCGTGTGGCAC
ACGAGCACCGACACACACGCGCTCGGGGAGAAGCAATCCAAGGGGGGGCG
CGCTCTATAGTACACCGGGACGTGGGATATGGCGTGGCTGCTTCGTGCAC
AGGCTCACGAGTTCTAGGGAGCGTTCACTCTATCGCGTTTTGTTGCCCTG
TGCGCTCAAGAGAGCGGGGGGGAAAGACCATCAAACTTCAAGCAAGGAAA
TAGATCTCGCCTTCCGTGCCACCAGCGCCACCGTGCGCACCTCTCCGAAT
GCTTTGTTGTTCCCGCATTTCACGGCAGCCCACATTGTTGATTGGGCTGT
TTTTGGCAACGAAATTGTCGGCACGCAAATGTCTCGGTGGCGCACCCCTA
GCTCCTGGACGGTTGAAGGGGGCTCCTCTATTTGAAACAACACACATGTG
GTCTGTTATCATCCAGTACGGCGGTGCGGCGGTGGTGGTGATATCGCTTA
CATCCCTGTCCTGTTCCCTTGTTGTCTCTTGTATCTAAGCAGAAGCTTCA
CATGGCAGCTGGCGTGGCCATGCCGGAGATCAAAACCGCAGGACCTTCGG
TGGGACTCGTGGAGAAGAAGGAAGTTTCCTTCGAGACGAACATCAGACCG
GAGGACAAGGTATGTACGAAGTGTCGACATGCACAAAAAAATCACACCAA
AAATATCTTCTTGTGAAGCCAAATCGCGTAAAAATGCGCCTCCTGCAGGG
GTGCCTCCGGCGGGGCCCCCTCAGCCAGGGGGGGCCGAGGGGGGGCTCGC
TTCGCTCGCCGGGCTCGCTGCGCGCGCAGCAAGCGGGCCGATATTTTCAC
GAGCCAATAAATATATAGGTGTTTTTTATTTTTTTTAATTAATTAATTGT
TTGTTTGGAGCAGACAATATATATAGGAGGAGCATTTTTCTAGAAAACGA
GATCGATGGTCGTGCACTGTCGTATTTGTTGCAGGCTCGAATGTGCTTGC
CCGTGGAGCTTGCACAGCCTTTGCTTGCGTTGCACACACGGATGGCGTTT
GACTGCTGTGCTCTCTAACCATTTCCCCATTCTGCAATGAGCACCGGCGG
AAGGTTCGAACCACGAACCACGACGGGCAAAGAGACGTCGAATACATGTG
CACATCATGTGTATGTAGACGTGTTTCGTGGGTCTTTTTTTGCGGGTTTT
TTTCGTTTTTTTCGGGCATGATTAATATACCCAGGTTTTCACCAAGTAGG
CTCAGACGGATCCGATGTTGGTTCACATTCCGCGCTCATCTCGGGCCTGC
TTCCAACCCTCGGTCACGAGTGGCGCCTTGATGAACACCACCAGCACCCT
TGCGCGTTACCGTTTTGCCACCCGCGTGTGCTTCTCCGCAAAAGCTGCAC
CCAAAAAATTCAAACCACGAGTCGTGTAGGCATTGCACCTTTCCCGGTCC
ACCCACCGCTGCGCTTCGCCTCCAGCACATGCTGCTGATGTTACGCATGG
TTGAGATGACAAGAATAAGTCGCCAATAAAGCGGCGCAGGTCCTGCCTTG
CGTCTTCCTAAGTACGTCTTGACACGAAGCCGCCACACCACGTCTCACGT
CCCGGTGTACTATAGAGCGCGCCCCCCCTTGGATTGCTTCTCCCCGAGCG
CGTGTGTGTCGGTGCTCGTGTGCCACACGAACGCGAGAGAGGAAGCAACC
CCACCAACACGTCAGCGGCACCCTGTGTAGTGCAACCCAACTGACCGACT
TGTCTGCGAAACCAAACCGAGGCAAAGCCGCAGAAAGGGAGGCCACCACC
ACGCCAAGCATGCTAACCTTGTACGCTTCTACCACCCACCACCCCATGGA
AACCACACGAAGCCTACCCTCGAGGAGGCCTATCGATTTGTTGCCTGTTG
CCTCACCGCGAAAGTTCTCGCGCCAGTGACTGAAGGTCTTCCAGCCCATG
TTTGCGAAGCCGACGGTACGACGAATGCGGTGGATGCGTACGCCACCAAA
GCGAGAACAAGTCCTTGCACCGGACGGAACATGACTGTGTATGTGCGTGT
GTATGCGTGCAGTGTAGACGGCGTTGTGCTGTTTGCGGAAACGTGGTGTG
GACTCGAAGAAGAGCGATTCCGAGGGGCAGCTACAGATGGAAACGTGCGG
GGGGCTAAAGAGCACTTACGTTGTCGTTATTCCCTTTCGCTGCCGCTTCA
CGTACCGGCGATCGATACACACACACCAACCGAGAGCAATACACCATCGG
AAGCTCTCACGGCAGCGAGGTTTTCACGACACCCCGCGAACCTAAGCACA
CCCAGGCCCGAGGTGTGGCATAAGCTTGCTCTCTCCGCTGCTGCGTGTCG
ACCGCAAGAACGTCCCCCGCGCCTCGCGCCTCGGTGTCACACCACACCTC
GCCAAACACGATGACATCTCAACGCAGCACCACACTGGCCGTGCTCGGCC
TCCTGGCCGGCTTCGTCAACGTCGATGCGTTCCGCCTGATTCCCGCGTCG
CCGGGAGCGGTGTCCTCGTCGCTCGCCCGCGCACAGCAGCAGTCAGCGGT
GGCAAGTCGTGGGGCTTCAACCCGGCGGACGTGGCGGTCAGCACGCGGCT
TACGTTTGATCGGTGTGTTTTACCCGACAGCCCAGGCCTTCTTTTCGCCA
ACCCACGCGCTGCCATCATCGCTTTTTGGCTCAGTCAAATCTCTGCTGCG
CTTGTTGATGCGATCGTTGCCTATTTTTTGTTGTTTTTCTTTTGCAGTTC
AAGGTCCTCCTGTTCAACGACAACGGCAACACCCGCGAGTACGTCTCGAG
GTCCCTGGTGCAGGTGGTCGGCCTGTCCGAGGCCACTGCCTTCCACATCA
TGCAGCAGGTGTGTGTGTTTTGCGCGCGTATGTGCCCTTCACCTAGAGAC
ACAGGTAGGTGGAGACATCCCCTCCTGTGACCCCGGATGGTAGCCTAGCT
AGTTGTAGTGAAGAGGAGGAGGCAGGCTACGAAAAAAGATATGAGGCGAG
AAAAAATATATAGTCTATTGAAGTATGTATATAGCCACAACTCGGAAAAG
GCATTGCTTGCGTACGTACGCAGGTGTGTGTGTTCTTGAGTCAATACTAC
TGCCGTACGTATGCCCAAAGCTTGGGCAAACAAAGCGTTCCGCCCTGCGT
GAACACGTCTTTCTGGGATTGTTGTACTTGCGTGTTGCCCCTCGGAGCAA
GAGTGTCGGGTGCTTGCGTGTTGCCCCTCGGAGCAAGAGTGTCGGGTGCT
GTTTCTGTCCTCAATTCCCTTCTTTCTTTTGTGTCGACGGAATCACTGCG
ACCAAGTTCGCGATTCGCTGTCCCACGCGACTATCGTCGGTGGAGGGGAA
GGGTCCTTGCGCTATCTTCGAGGACCAAGGCGTGTGTGTCGGTCGTGCTT
CGTATTATACTTTTTCTCCTGTTCTGCTGTGTGTTGGGATACGACAAGTA
CGACTTGAGGTTTCTTTTCCTTCACCCACCGACTAAACACGCTTTCTGTC
CCGTAAACTCCTTCCCTGTGGGCGATCAAAACGACAGCAGCGGGGACCCT
CGTCACCTTTTTGACCCACCCTCCACGGCAGTTCTTGGTATAACCTTCAC
CTTCACCAACCTGTGCTGTTTCGTGCCCTCTTTGAGCAGGCGAATGATAA
CGGCATGGCCCTGGTCGGAATCTGGCACCAGGAAATGGCAGACGCCTACA
GCACTTCCCTGAAGGAAAGGGGTCTGATCGCCGAAACTCACCCCGCGGAC
TGA

Coding sequence (CDS) from alignment at C-linearis_contig104:511482..515634-

>mRNA_C-linearis_contig104.919.1 ID=mRNA_C-linearis_contig104.919.1|Name=mRNA_C-linearis_contig104.919.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=1116bp|location=Sequence derived from alignment at C-linearis_contig104:511482..515634- (Chordaria linearis ClinC8C monoicous)
AATCGCTCTTCTTCGAGTCCACACCACGTTTCCGCAAACAGCACAACGCC
GTCTACACTGCACGCATACACACGCACATACACAGTCATGTTCCGTCCGG
TGCAAGGACTTGTTCTCGCTTTGGTGGCGTACGCATCCACCGCATTCGTC
GTACCGTCGGCTTCGCAAACATGGGCTGGAAGACCTTCAGTCACTGGCGC
GAGAACTTTCGCGAATCGCTCTTCTTCGAGTCCACACCACGTTTCCGCAA
ACAGCACAACGCCGTCTACACTGCACGCATACACACGCACATACACAGTC
ATGTTCCGTCCGGTGCAAGGACTTGTTCTCGCTTTGGTGGCGTACGCATC
CACCGCATTCGTCGTACCGTCGGCTTCGCAAACATGGGCTGGAAGACCTT
CAGTCACTGGCGCGAGAACTTTCGCGAAGCTTCACATGGCAGCTGGCGTG
GCCATGCCGGAGATCAAAACCGCAGGACCTTCGGTGGGACTCGTGGAGAA
GAAGGAAGTTTCCTTCGAGACGAACATCAGACCGGAGGACAAGAAGCTTC
ACATGGCAGCTGGCGTGGCCATGCCGGAGATCAAAACCGCAGGACCTTCG
GTGGGACTCGTGGAGAAGAAGGAAGTTTCCTTCGAGACGAACATCAGACC
GGAGGACAAGTTCAAGGTCCTCCTGTTCAACGACAACGGCAACACCCGCG
AGTACGTCTCGAGGTCCCTGGTGCAGGTGGTCGGCCTGTCCGAGGCCACT
GCCTTCCACATCATGCAGCAGTTCAAGGTCCTCCTGTTCAACGACAACGG
CAACACCCGCGAGTACGTCTCGAGGTCCCTGGTGCAGGTGGTCGGCCTGT
CCGAGGCCACTGCCTTCCACATCATGCAGCAGCAGGCGAATGATAACGGC
ATGGCCCTGGTCGGAATCTGGCACCAGGAAATGGCAGACGCCTACAGCAC
TTCCCTGAAGGAAAGGGGTCTGATCGCCGAAACTCACCCCGCGGACTGAC
AGGCGAATGATAACGGCATGGCCCTGGTCGGAATCTGGCACCAGGAAATG
GCAGACGCCTACAGCACTTCCCTGAAGGAAAGGGGTCTGATCGCCGAAAC
TCACCCCGCGGACTGA