Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Ec32 ortholog description | Kinesin-like protein |
| Ec32 ortholog | Ec-27_000130.1 |
| Exons | 4 |
| Model size | 983 |
| Cds size | 564 |
| Stop | 1 |
| Start | 0 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622927381.1250067-UTR-C-linearis_contig104:230663..231082 | 1622927381.1250067-UTR-C-linearis_contig104:230663..231082 | Chordaria linearis ClinC8C monoicous | UTR | C-linearis_contig104 230664..231082 - |
| 1690879666.7205522-UTR-C-linearis_contig104:230663..231082 | 1690879666.7205522-UTR-C-linearis_contig104:230663..231082 | Chordaria linearis ClinC8C monoicous | UTR | C-linearis_contig104 230664..231082 - |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622927381.1349387-CDS-C-linearis_contig104:231082..231180 | 1622927381.1349387-CDS-C-linearis_contig104:231082..231180 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig104 231083..231180 - |
| 1690879666.7334652-CDS-C-linearis_contig104:231082..231180 | 1690879666.7334652-CDS-C-linearis_contig104:231082..231180 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig104 231083..231180 - |
| 1622927381.1448681-CDS-C-linearis_contig104:231295..231499 | 1622927381.1448681-CDS-C-linearis_contig104:231295..231499 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig104 231296..231499 - |
| 1690879666.7440302-CDS-C-linearis_contig104:231295..231499 | 1690879666.7440302-CDS-C-linearis_contig104:231295..231499 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig104 231296..231499 - |
| 1622927381.153632-CDS-C-linearis_contig104:231519..231732 | 1622927381.153632-CDS-C-linearis_contig104:231519..231732 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig104 231520..231732 - |
| 1690879666.75257-CDS-C-linearis_contig104:231519..231732 | 1690879666.75257-CDS-C-linearis_contig104:231519..231732 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig104 231520..231732 - |
| 1622927381.165296-CDS-C-linearis_contig104:232451..232500 | 1622927381.165296-CDS-C-linearis_contig104:232451..232500 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig104 232452..232500 - |
| 1690879666.7612627-CDS-C-linearis_contig104:232451..232500 | 1690879666.7612627-CDS-C-linearis_contig104:232451..232500 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig104 232452..232500 - |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig104.886.1 >prot_C-linearis_contig104.886.1 ID=prot_C-linearis_contig104.886.1|Name=mRNA_C-linearis_contig104.886.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=188bp
GPSKRRARGSWSGRPHGRPTRKLLERRTSAPAPKKSWPPRWPSGISSRPS
PREKPTAQTPRRPRPPGFSGTIPKNGPRGGSWRASLSAEAGRVEGLEDKL
RSGQEEIARLESDKQEVLSAVPPAAAAVPVPGGSSAHSTPTVGGSSEEEE
DEDFGAAEAAAAAVAAAATTALLPTNNTGRPRRGRRT* back to topmRNA from alignment at C-linearis_contig104:230664..232500- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_C-linearis_contig104.886.1 ID=mRNA_C-linearis_contig104.886.1|Name=mRNA_C-linearis_contig104.886.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=1837bp|location=Sequence derived from alignment at C-linearis_contig104:230664..232500- (Chordaria linearis ClinC8C monoicous)
GGGCCAAGCAAGCGGAGAGCGCGAGGAAGCTGGAGCGGGAGACCACACGG
TACGCTAACCCGTGGCGCCATGGGCTTGTGTTTGGTCTGGTTTGTCGTGG
TTCGGTTCTGTTTTTTTAACGCATCAAACAAGTTTTGTACGCAGTTGCAA
TCTTACGCGCCGTTTCTCTCGTTGTATTTCGCGCAATAAATTAGAGTTTG
GAAGCTCTTTCCCTCTTTAGTGCTATACACCTACGCACCTCTAAGTGGCG
CGAATGGTTCGGCAGTTTGTCCGTGCTCCGTCGAGATCGCATCCAGTCTA
GCCATCCTCTCCGGCAGGAAGCACCGTTGTCGTACATACGCCAACACGAT
TGCTTCACCGGTCAAGATTCCTAGCCAGGCCTCTGCGAGCGTTCCTCGCT
TGTCGCTGCCAAATTGGCTGGAATTACTTATAATTGACTAGATTGTTCGA
TTGGTAGCTGCACACGAGGAAAAAGAGAAAGTCTTAGCCTTGCATTGAGT
ACGGATGGAGTCTTCTCCCGGGTTCTTCAACAACAACAGGTAGAAAAGGT
TCCTCTCATCCGTGGAGTTCGCATGCCGCGCTCATTACCCCTCGCTTTCT
GCGTTCCGAAAGGCATACCACGACCCTTTGTTTCGACCAACGTCACTGGG
TTTGTTTCGCTCCACTAGACTGCACCTCTATTTTTTTGTTATTTCACCCC
CGAAAGCGCTGCTATTCCAAGCTTCCTCCACTGCTGTACGTTATTTCGTC
CACCAACAACGTATCCAGGGAGGCCGACGAGGAAGTTGCTCGAACGGCGA
ACGAGCGCGCCCGCGCCGAAGAAAAGCTGGCCGCCACGATGGCCGAGCGG
GATCAGCTCAAGACCTTCGCCGAGAGAGAAACCGACCGCGCAGACGCCGC
GGAGGCCAAGACCACCCGGGTTCTCAGGGACCATTCCGAAGAACGGTCCG
CGCGGCGGGAGCTGGAGGGCAAGTTTGAGCGGCTCGAAGAAACGGCGGCA
GCGGAGGCCGGCCGCGTGGAGGGCCTCGAGGATAAGCTTCGCTCGGGTCA
GGAGGAGATCGCCCGGCTTGAGAGCGACAAGCAGGAAGTGCTGTCGGCGG
TGCCCCCTGCGGCTGCGGCGGTGCCTGTTCCAGGGGGCAGCAGTGCGCAC
TCCACCCCGACCGTTGGGGGTAGCTCCGAGGAGGAAGAAGACGAGGACTT
CGGCGGCAGGTCGGGCGGCAGCTCGGAGAGCAGCCCTTTCGAGCACGGCG
GTAGCGGGCAGGAAGACGAGGAGCAAGACGGTTCATCGGTTATCATGCTC
AACGACTTCGGCAGAGGAAGCCGCGGAAGCAGCCGCAGCGGCAGTAGCAG
CAGCTGCAACAACGGCTCTCCTACCGACGAACAACACCGGGAGACCGAGG
AGGGGGAGGAGAACGTGACGGTCGGGGCGTCATCCCCTCCTCGTTCCGGC
AGCGCTTCCGCCGACGTCGGCGGCAACGACGACATCGGCGACATCGGCGA
CAACGACGACAGAAGCGACAACGACGACAGAAGCGAAGAAGTCGACGACG
AGGCTGCACCTCCTGCCGCAGAAAACCACGAGCCCTCATCGTTGCCGTCG
CCGCCGCCGAAGGTCGTCGCCAAGACGAGGAGCAGGAGGAGGGTGGGACA
GCTGGAGTCATTGCAGATCACAGCGAGCCCCGCGGGCGGAGCCGCCCACC
AGAGAAAGCCAAAGCAAAGGGCGGACCGCAAGCCCCTCGGGAACCTCCAG
AACGGGGCGACGCCGGCCCGAACGAAGGGCGCCAAGGGCGGCAAGAAGAA
GGTTGGCGTCGAGGAGAACCAGGAGGCGGCAGCGGTG back to topCoding sequence (CDS) from alignment at C-linearis_contig104:230664..232500- >mRNA_C-linearis_contig104.886.1 ID=mRNA_C-linearis_contig104.886.1|Name=mRNA_C-linearis_contig104.886.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=1128bp|location=Sequence derived from alignment at C-linearis_contig104:230664..232500- (Chordaria linearis ClinC8C monoicous)
GGGCCAAGCAAGCGGAGAGCGCGAGGAAGCTGGAGCGGGAGACCACACGG
GGCCAAGCAAGCGGAGAGCGCGAGGAAGCTGGAGCGGGAGACCACACGGG
AGGCCGACGAGGAAGTTGCTCGAACGGCGAACGAGCGCGCCCGCGCCGAA
GAAAAGCTGGCCGCCACGATGGCCGAGCGGGATCAGCTCAAGACCTTCGC
CGAGAGAGAAACCGACCGCGCAGACGCCGCGGAGGCCAAGACCACCCGGG
TTCTCAGGGACCATTCCGAAGAACGGTCCGCGCGGCGGGAGCTGGAGGGC
AAGTTTGAGCGGGAGGCCGACGAGGAAGTTGCTCGAACGGCGAACGAGCG
CGCCCGCGCCGAAGAAAAGCTGGCCGCCACGATGGCCGAGCGGGATCAGC
TCAAGACCTTCGCCGAGAGAGAAACCGACCGCGCAGACGCCGCGGAGGCC
AAGACCACCCGGGTTCTCAGGGACCATTCCGAAGAACGGTCCGCGCGGCG
GGAGCTGGAGGGCAAGTTTGAGCGCGGAGGCCGGCCGCGTGGAGGGCCTC
GAGGATAAGCTTCGCTCGGGTCAGGAGGAGATCGCCCGGCTTGAGAGCGA
CAAGCAGGAAGTGCTGTCGGCGGTGCCCCCTGCGGCTGCGGCGGTGCCTG
TTCCAGGGGGCAGCAGTGCGCACTCCACCCCGACCGTTGGGGGTAGCTCC
GAGGAGGAAGAAGACGAGGACTTCGGCGCGGAGGCCGGCCGCGTGGAGGG
CCTCGAGGATAAGCTTCGCTCGGGTCAGGAGGAGATCGCCCGGCTTGAGA
GCGACAAGCAGGAAGTGCTGTCGGCGGTGCCCCCTGCGGCTGCGGCGGTG
CCTGTTCCAGGGGGCAGCAGTGCGCACTCCACCCCGACCGTTGGGGGTAG
CTCCGAGGAGGAAGAAGACGAGGACTTCGGCGCCGCGGAAGCAGCCGCAG
CGGCAGTAGCAGCAGCTGCAACAACGGCTCTCCTACCGACGAACAACACC
GGGAGACCGAGGAGGGGGAGGAGAACGTGACCGCGGAAGCAGCCGCAGCG
GCAGTAGCAGCAGCTGCAACAACGGCTCTCCTACCGACGAACAACACCGG
GAGACCGAGGAGGGGGAGGAGAACGTGA back to top
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