mRNA_C-linearis_contig104.884.1 (mRNA) Chordaria linearis ClinC8C monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_C-linearis_contig104.884.1
Unique Name	mRNA_C-linearis_contig104.884.1
Type	mRNA
Organism	Chordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)

Homology

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BLAST of mRNA_C-linearis_contig104.884.1 vs. uniprot
Match: D8LE56_ECTSI (TFIIS-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LE56_ECTSI)

HSP 1 Score: 245 bits (626), Expect = 2.430e-75
Identity = 113/119 (94.96%), Postives = 117/119 (98.32%), Query Frame = 2

Query:   77 KMADTMRFCSECNNIMHPKENKADRKLVYACNRCSYKEDAQSGSCIYRNNLITTAGNKLDIVQTDVVDDPTLQRSKNAICEKCNYNEAVFFQADEGAKSQSLSLIFVCTNRACGHKWVS 433
            KMADTMRFCSECNNIMHPKENK DRKL+Y+CNRC Y+EDAQSGSC+YRNNLITTAGNKLDIVQTDVVDDPTLQRSKNAICEKCNYNEAVFFQADEGAKSQSLSLIFVCTNRACGHKWVS
Sbjct:  119 KMADTMRFCSECNNIMHPKENKTDRKLMYSCNRCKYEEDAQSGSCVYRNNLITTAGNKLDIVQTDVVDDPTLQRSKNAICEKCNYNEAVFFQADEGAKSQSLSLIFVCTNRACGHKWVS 237

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BLAST of mRNA_C-linearis_contig104.884.1 vs. uniprot
Match: A0A835YYP5_9STRA (DNA-directed RNA polymerase subunit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYP5_9STRA)

HSP 1 Score: 167 bits (424), Expect = 4.350e-47
Identity = 78/113 (69.03%), Postives = 92/113 (81.42%), Query Frame = 2

Query:   92 MRFCSECNNIMHPKENKADRKLVYACNRCSYKEDAQSGSCIYRNNLITTAGNKLDIVQTDVVDDPTLQRSKNAICEKCNYNEAVFFQADEGAKSQSLSLIFVCTNRACGHKWV 430
            MRFC ECNNI+HPKEN+  R L YACNRC+Y+E+A   SC+Y NNL+ T   KLDIV  DVV+DPTLQRSK+ IC++CNY+EAVFFQAD+ AKS SLSLIFVCT+  CG KWV
Sbjct:    1 MRFCKECNNILHPKENRTTRTLFYACNRCAYREEAGQ-SCVYENNLVKTTELKLDIVHEDVVNDPTLQRSKHQICDRCNYSEAVFFQADDSAKSSSLSLIFVCTH--CGKKWV 110

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BLAST of mRNA_C-linearis_contig104.884.1 vs. uniprot
Match: A0A1Y1IMB2_KLENI (DNA-directed RNA polymerase subunit n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1IMB2_KLENI)

HSP 1 Score: 124 bits (310), Expect = 1.780e-30
Identity = 57/113 (50.44%), Postives = 77/113 (68.14%), Query Frame = 2

Query:   89 TMRFCSECNNIMHPKENKADRKLVYACNRCSYKEDAQSGSCIYRNNLITTAGNKLDIVQTDVVDDPTLQRSKNAICEKCNYNEAVFFQADEGAKSQSLSLIFVCTNRACGHKW 427
            TM+FC ECNNI++P+ENKA+++L YAC RC + EDA+  SC+YRN +  TA  +  ++Q DV  DPTL RSK   C  C + EAVFFQA    + + ++L FVC N  C H+W
Sbjct:    3 TMKFCRECNNILYPRENKAEKRLEYACGRCDFSEDAEQ-SCVYRNEIHHTADERTQVLQ-DVTSDPTLPRSKALRCPVCKHGEAVFFQATSRGE-EGMTLFFVCCNPNCQHRW 112

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BLAST of mRNA_C-linearis_contig104.884.1 vs. uniprot
Match: A0A1B6PTV6_SORBI (DNA-directed RNA polymerase subunit n=2 Tax=Andropogoneae TaxID=147429 RepID=A0A1B6PTV6_SORBI)

HSP 1 Score: 120 bits (300), Expect = 4.740e-29
Identity = 54/113 (47.79%), Postives = 76/113 (67.26%), Query Frame = 2

Query:   89 TMRFCSECNNIMHPKENKADRKLVYACNRCSYKEDAQSGSCIYRNNLITTAGNKLDIVQTDVVDDPTLQRSKNAICEKCNYNEAVFFQADEGAKSQSLSLIFVCTNRACGHKW 427
            TMRFC ECNNI++PKE++A++ L+YAC  C ++E A S +C+YRN +   AG    ++  DV  DPTL R+K+  C  C + EAVFFQA    +   ++L FVC N +CGH+W
Sbjct:    3 TMRFCRECNNILYPKEDRANKVLLYACRNCEHQEVADS-NCVYRNVVDHDAGELTQVLSEDVASDPTLPRTKSVRCAACGHGEAVFFQATTRGED-GMALFFVCCNPSCGHRW 113

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BLAST of mRNA_C-linearis_contig104.884.1 vs. uniprot
Match: A0A7S3NJ32_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NJ32_9STRA)

HSP 1 Score: 120 bits (300), Expect = 1.080e-28
Identity = 53/112 (47.32%), Postives = 72/112 (64.29%), Query Frame = 2

Query:   95 RFCSECNNIMHPKENKADRKLVYACNRCSYKEDAQSGSCIYRNNLITTAGNKLDIVQTDVVDDPTLQRSKNAICEKCNYNEAVFFQADEGAKSQSLSLIFVCTNRACGHKWV 430
            RFC +C N+  P+E +  R L+  C  C Y+E A S   +Y N +      +LDI+  ++ DDPTLQRS + +CE CNY+EAV FQA+ G  ++SLSLIFVC N  C HKW+
Sbjct:   34 RFCPQCGNMWQPREERTTRTLMLNCRNCGYEEPATSYK-VYENRIKKEVSTRLDIINPEITDDPTLQRSNDVVCENCNYSEAVLFQAESGITAKSLSLIFVCCN--CKHKWI 142

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BLAST of mRNA_C-linearis_contig104.884.1 vs. uniprot
Match: B8BUI2_THAPS (DNA-directed RNA polymerase subunit n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BUI2_THAPS)

HSP 1 Score: 118 bits (295), Expect = 2.230e-28
Identity = 60/115 (52.17%), Postives = 79/115 (68.70%), Query Frame = 2

Query:   92 MRFCSECNNIMHPKENKADRKLVYACNRCSYKEDAQSGSCIYRNNLITTAGNKLDIVQTDVVDDPTLQRSKNAICEKCNYNEAVFFQADEG-AKSQSLSLIFVCTNRACGHKWVS 433
            MRFC   +++++PKEN+ +RKL+YAC  C Y E A  G  IY+N L    GN L  V + V DDPTL RS+NA C+KC +NEAVFFQ+D    ++ +L+LIFVC N  C HKWV+
Sbjct:    1 MRFCPHDSSMLYPKENRNERKLLYACRLCRYTEYAP-GQLIYQNILKKEVGNVLHTVPSAVSDDPTLPRSQNAHCDKCGHNEAVFFQSDTSDVRNDTLALIFVCCN--CDHKWVA 112

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BLAST of mRNA_C-linearis_contig104.884.1 vs. uniprot
Match: A0A843UFX2_COLES (TFIIS-type domain-containing protein n=1 Tax=Colocasia esculenta TaxID=4460 RepID=A0A843UFX2_COLES)

HSP 1 Score: 121 bits (304), Expect = 4.100e-28
Identity = 57/119 (47.90%), Postives = 83/119 (69.75%), Query Frame = 2

Query:   71 LSKMADTMRFCSECNNIMHPKENKADRKLVYACNRCSYKEDAQSGSCIYRNNLITTAGNKLDIVQTDVVDDPTLQRSKNAICEKCNYNEAVFFQADEGAKSQSLSLIFVCTNRACGHKW 427
            LS M+ TM+FC ECNNI++PKE++  + L+YAC  C ++E A + +C+YRN +  + G +  ++Q DV  DPTL R+KN  C KCN+ EAVFFQA    + + ++L FVC N +CGH+W
Sbjct:  124 LSNMS-TMKFCRECNNILYPKEDREQKILLYACRNCDHQEVADN-NCVYRNEIHHSVGERTQVLQ-DVAADPTLPRTKNVRCAKCNHPEAVFFQAAARGE-EGMTLFFVCCNPSCGHRW 238

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BLAST of mRNA_C-linearis_contig104.884.1 vs. uniprot
Match: A0A8H7UCI9_9FUNG (DNA-directed RNA polymerase subunit n=2 Tax=Umbelopsis TaxID=64561 RepID=A0A8H7UCI9_9FUNG)

HSP 1 Score: 117 bits (292), Expect = 6.310e-28
Identity = 51/114 (44.74%), Postives = 81/114 (71.05%), Query Frame = 2

Query:   89 TMRFCSECNNIMHPKENKADRKLVYACNRCSYKEDAQSGSCIYRNNLITTAGNKLDIVQTDVVDDPTLQRSKNAICEKCNYNEAVFFQADEGAKSQSLSLIFVCTNRACGHKWV 430
            + ++CSECNN+++P+E+K +RKL++AC  C ++EDA + +C+YR+ ++  A ++  +V TD+  DPTL R+  A C +C Y EAVFFQ+        ++L +VC NRACGH+WV
Sbjct:    3 SFKYCSECNNMLYPREDKTNRKLLFACRNCHFEEDADN-NCVYRHEIVH-APSEQTMVLTDLSADPTLPRTTTA-CPRCGYQEAVFFQSAARRADTKMTLFYVCCNRACGHRWV 113

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BLAST of mRNA_C-linearis_contig104.884.1 vs. uniprot
Match: UPI001D0951AA (DNA-directed RNA polymerase II subunit RPB9 n=1 Tax=Chrysoperla carnea TaxID=189513 RepID=UPI001D0951AA)

HSP 1 Score: 117 bits (292), Expect = 1.070e-27
Identity = 55/112 (49.11%), Postives = 73/112 (65.18%), Query Frame = 2

Query:   92 MRFCSECNNIMHPKENKADRKLVYACNRCSYKEDAQSGSCIYRNNLITTAGNKLDIVQTDVVDDPTLQRSKNAICEKCNYNEAVFFQADEGAKSQSLSLIFVCTNRACGHKW 427
            +RFC ECNN+++PKE+K ++ L+YAC  C YK+ A S +CIY N ++        IV  DVV DPTL RS++  C KCNY EAVFFQA      + + L +VCTN  C H+W
Sbjct:   21 IRFCQECNNMLYPKEDKENKVLLYACRNCDYKQLADS-NCIYVNKIMHEIDELTHIVP-DVVSDPTLPRSEDHHCPKCNYREAVFFQAQTRRAEEEMRLYYVCTNPQCTHRW 130

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BLAST of mRNA_C-linearis_contig104.884.1 vs. uniprot
Match: A0A8B7CCB1_PHODC (DNA-directed RNA polymerase subunit n=3 Tax=Arecaceae TaxID=4710 RepID=A0A8B7CCB1_PHODC)

HSP 1 Score: 116 bits (290), Expect = 1.210e-27
Identity = 54/112 (48.21%), Postives = 77/112 (68.75%), Query Frame = 2

Query:   92 MRFCSECNNIMHPKENKADRKLVYACNRCSYKEDAQSGSCIYRNNLITTAGNKLDIVQTDVVDDPTLQRSKNAICEKCNYNEAVFFQADEGAKSQSLSLIFVCTNRACGHKW 427
            M+FC ECNNI++PKE+K  + L++AC  C Y+E A S  C+YRN +    G +  I+Q DV +DPTL R+K+  C KC++ EAVFFQA    + + ++L FVC N ACG++W
Sbjct:    4 MKFCRECNNILYPKEDKQKKILLFACRNCDYEEVADS-FCVYRNEVHHAVGERTQILQ-DVANDPTLPRTKDVRCVKCDHPEAVFFQASSRGE-EGMTLFFVCCNPACGYRW 112

The following BLAST results are available for this feature:

BLAST of mRNA_C-linearis_contig104.884.1 vs. uniprot

BLAST of mRNA_C-linearis_contig104.884.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25

ZOOM

x 1

POSITION

0


Match Name	E-value	Identity	Description
D8LE56_ECTSI	2.430e-75	94.96	TFIIS-type domain-containing protein n=1 Tax=Ectoc...	[more]
A0A835YYP5_9STRA	4.350e-47	69.03	DNA-directed RNA polymerase subunit n=1 Tax=Tribon...	[more]
A0A1Y1IMB2_KLENI	1.780e-30	50.44	DNA-directed RNA polymerase subunit n=1 Tax=Klebso...	[more]
A0A1B6PTV6_SORBI	4.740e-29	47.79	DNA-directed RNA polymerase subunit n=2 Tax=Androp...	[more]
A0A7S3NJ32_9STRA	1.080e-28	47.32	Hypothetical protein n=1 Tax=Aureoumbra lagunensis...	[more]
B8BUI2_THAPS	2.230e-28	52.17	DNA-directed RNA polymerase subunit n=1 Tax=Thalas...	[more]
A0A843UFX2_COLES	4.100e-28	47.90	TFIIS-type domain-containing protein n=1 Tax=Coloc...	[more]
A0A8H7UCI9_9FUNG	6.310e-28	44.74	DNA-directed RNA polymerase subunit n=2 Tax=Umbelo...	[more]
UPI001D0951AA	1.070e-27	49.11	DNA-directed RNA polymerase II subunit RPB9 n=1 Ta...	[more]
A0A8B7CCB1_PHODC	1.210e-27	48.21	DNA-directed RNA polymerase subunit n=3 Tax=Arecac...	[more]

Pages

Properties


Property Name	Value
Taxonomic scope	Eukaryota
Seed ortholog score	244.2
Seed ortholog evalue	3.1e-62
Seed eggNOG ortholog	2880.D8LE56
Preferred name	POLR2I
KEGG rclass	RC02795
KEGG ko	ko:K03017
KEGG Reaction	R00435,R00441,R00442,R00443
KEGG Pathway	ko00230,ko00240,ko01100,ko03020,ko05016,ko05169,map00230,map00240,map01100,map03020,map05016,map05169
KEGG Module	M00180
Hectar predicted targeting category	other localisation
GOs	GO:0000375,GO:0000377,GO:0000398,GO:0000428,GO:0001192,GO:0001193,GO:0003674,GO:0003824,GO:0003899,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005665,GO:0006139,GO:0006259,GO:0006281,GO:0006283,GO:0006289,GO:0006351,GO:0006352,GO:0006354,GO:0006366,GO:0006367,GO:0006368,GO:0006370,GO:0006396,GO:0006397,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0007154,GO:0007165,GO:0007166,GO:0007167,GO:0007169,GO:0008150,GO:0008152,GO:0008270,GO:0008380,GO:0008543,GO:0009058,GO:0009059,GO:0009301,GO:0009452,GO:0009719,GO:0009987,GO:0010033,GO:0010467,GO:0010468,GO:0016070,GO:0016071,GO:0016073,GO:0016591,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019222,GO:0019438,GO:0023052,GO:0030880,GO:0031974,GO:0031981,GO:0032774,GO:0032991,GO:0033554,GO:0034062,GO:0034641,GO:0034645,GO:0034654,GO:0034660,GO:0036260,GO:0042221,GO:0042795,GO:0043167,GO:0043169,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044344,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044451,GO:0044464,GO:0046483,GO:0046872,GO:0046914,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0055029,GO:0060147,GO:0060255,GO:0060964,GO:0060966,GO:0060968,GO:0061695,GO:0065007,GO:0070013,GO:0070848,GO:0070887,GO:0071310,GO:0071363,GO:0071495,GO:0071704,GO:0071774,GO:0090304,GO:0097659,GO:0097747,GO:0098781,GO:0140098,GO:1901360,GO:1901362,GO:1901576,GO:1902494,GO:1990234
EggNOG free text desc.	Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and or for immediate growth after restoration of oxygen
EggNOG OGs	COG1594@1,KOG2691@2759
Ec32 ortholog description	Zinc finger, TFIIS-type
Ec32 ortholog	Ec-00_001020.1
COG Functional cat.	K
Best tax level	Eukaryota
Best eggNOG OG	NA\|NA\|NA
BRITE	br01611,ko00000,ko00001,ko00002,ko03021,ko03400
Exons	5
Model size	1432
Cds size	357
Stop	1
Start	1

Relationships

The following UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1622927384.943315-UTR-C-linearis_contig104:208934..209013	1622927384.943315-UTR-C-linearis_contig104:208934..209013	Chordaria linearis ClinC8C monoicous	UTR	C-linearis_contig104 208935..209013 +
1690879668.849322-UTR-C-linearis_contig104:208934..209013	1690879668.849322-UTR-C-linearis_contig104:208934..209013	Chordaria linearis ClinC8C monoicous	UTR	C-linearis_contig104 208935..209013 +
1622927385.0462496-UTR-C-linearis_contig104:211042..212038	1622927385.0462496-UTR-C-linearis_contig104:211042..212038	Chordaria linearis ClinC8C monoicous	UTR	C-linearis_contig104 211043..212038 +
1690879668.9102876-UTR-C-linearis_contig104:211042..212038	1690879668.9102876-UTR-C-linearis_contig104:211042..212038	Chordaria linearis ClinC8C monoicous	UTR	C-linearis_contig104 211043..212038 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1622927384.992344-CDS-C-linearis_contig104:209013..209014	1622927384.992344-CDS-C-linearis_contig104:209013..209014	Chordaria linearis ClinC8C monoicous	CDS	C-linearis_contig104 209014..209014 +
1690879668.8654869-CDS-C-linearis_contig104:209013..209014	1690879668.8654869-CDS-C-linearis_contig104:209013..209014	Chordaria linearis ClinC8C monoicous	CDS	C-linearis_contig104 209014..209014 +
1622927385.0029895-CDS-C-linearis_contig104:209693..209724	1622927385.0029895-CDS-C-linearis_contig104:209693..209724	Chordaria linearis ClinC8C monoicous	CDS	C-linearis_contig104 209694..209724 +
1690879668.8745732-CDS-C-linearis_contig104:209693..209724	1690879668.8745732-CDS-C-linearis_contig104:209693..209724	Chordaria linearis ClinC8C monoicous	CDS	C-linearis_contig104 209694..209724 +
1622927385.011919-CDS-C-linearis_contig104:210062..210194	1622927385.011919-CDS-C-linearis_contig104:210062..210194	Chordaria linearis ClinC8C monoicous	CDS	C-linearis_contig104 210063..210194 +
1690879668.882574-CDS-C-linearis_contig104:210062..210194	1690879668.882574-CDS-C-linearis_contig104:210062..210194	Chordaria linearis ClinC8C monoicous	CDS	C-linearis_contig104 210063..210194 +
1622927385.0222678-CDS-C-linearis_contig104:210399..210517	1622927385.0222678-CDS-C-linearis_contig104:210399..210517	Chordaria linearis ClinC8C monoicous	CDS	C-linearis_contig104 210400..210517 +
1690879668.8934636-CDS-C-linearis_contig104:210399..210517	1690879668.8934636-CDS-C-linearis_contig104:210399..210517	Chordaria linearis ClinC8C monoicous	CDS	C-linearis_contig104 210400..210517 +
1622927385.0322394-CDS-C-linearis_contig104:210967..211042	1622927385.0322394-CDS-C-linearis_contig104:210967..211042	Chordaria linearis ClinC8C monoicous	CDS	C-linearis_contig104 210968..211042 +
1690879668.9018679-CDS-C-linearis_contig104:210967..211042	1690879668.9018679-CDS-C-linearis_contig104:210967..211042	Chordaria linearis ClinC8C monoicous	CDS	C-linearis_contig104 210968..211042 +

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_C-linearis_contig104.884.1	prot_C-linearis_contig104.884.1	Chordaria linearis ClinC8C monoicous	polypeptide	C-linearis_contig104 209014..211042 +

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at C-linearis_contig104:208935..212038+
coding sequence from alignment at C-linearis_contig104:208935..212038+

protein sequence of mRNA_C-linearis_contig104.884.1

>prot_C-linearis_contig104.884.1 ID=prot_C-linearis_contig104.884.1|Name=mRNA_C-linearis_contig104.884.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=119bp
MADTMRFCSECNNIMHPKENKADRKLVYACNRCSYKEDAQSGSCIYRNNL
ITTAGNKLDIVQTDVVDDPTLQRSKNAICEKCNYNEAVFFQADEGAKSQS
LSLIFVCTNRACGHKWVS*

mRNA from alignment at C-linearis_contig104:208935..212038+

Legend: UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_C-linearis_contig104.884.1 ID=mRNA_C-linearis_contig104.884.1|Name=mRNA_C-linearis_contig104.884.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=3104bp|location=Sequence derived from alignment at C-linearis_contig104:208935..212038+ (Chordaria linearis ClinC8C monoicous)
AGCTACACCGCTGGAGCAGCGAGAAACTTCGCCAAATTCATCGTAGTCGT
GGCGATTTACCGCCTTCCATCTATCTAAAAGTGAGTTGTTTATTCGCGGG
TTCTTTTTTTCACCTTCAAAGCAAAGTTAGCAGGAAGTGTGTCCGCAAGA
GAGACCACCAGCCTCTCCGCTGCGATGGAGTGATGGCGAAACCTTCCCTG
CTCCTTGGCCCGTTCTCACAACTATGACAGCCATATGTGTGTGTGCGTGT
GTGTCTTTGTGTCCGCTGACCCATGACTCAAGTTTTGTTTTGCTGTGCAG
TGGGTTCCATGCTGCCGAATGCTGGTGTGTGACCATGCCGGCCGATAGGC
GGGCCTCCCTTCAGCAGTATGGGCCGGATCAGCTTAGCCTACATGCTCTC
CGGTTCCCCACTTAGTAGCAGCGCTCTTCGTGTATATGTAGTCTAGGCTG
GACATGACCTTCTTCACATACAAAGATGGTTCACGTTTTTGGCACCCTTA
ACCATCAGAAAACGACGGCAGCATGATCATTTCATCGTCCGCGACAACCC
TCCAAAAGTCGTGTACCCCTGCTATCTACCTCACAACAACCGGGTTTGGG
TCCCTAGAGAGGGGGGAATTCCTGATGATCTGTGTCCATGTGAATTTCGG
CGAGGCTGCTCGTCTGACAGATCATCACCGTTTCGGGCCGTACCGCCGTT
GCTTGTTGTCTTTGCGAACGCTGTGCTGAACCTGACTGCCCCTTCCACCA
AAACACCAGTGGCGGACACCATGCGATTCTGCAGCGAATGGTGGGTGATT
TGACAGGAGAGTTGCAAACATCAGCCGTAATTTCTCTTGTGTGCAGGGAT
GATGTATGTCTGCCATACATACCGTCGACATTCTTGTTTGTCCACCTGCG
CGATCGAGAGCTCTGCGAATGCTGTCCCCCGCAACAACATGTTGCGGGCT
TCGAGTCAATCTCGACGAGGTGACGCGACGGATCCAGACCGTACGCAGTG
CAAGTGCCTATTCTGCTCGACCTTTTATTGCAGTCGCTGAAAGCCGCCAT
AAATACGTGCAACATGTGGCGACGGTATTTACACCGAAACGCATTGCGAC
CGCTCCCGTCCCCATTTGTGCTGGACAGCAACAACATCATGCACCCGAAG
GAGAACAAGGCGGACCGGAAACTCGTGTACGCGTGCAACCGATGTAGCTA
CAAGGAGGACGCACAGTCGGGATCATGCATCTACAGGAATAACCTCATCA
CCACTGCAGGGTAAGTTAGTCGGTGCGTTGAGAATATTATGCTGGTTTCG
GCATGACATATTTACCGTGACTCAGGTGTGTGGGTGAAATCGATGCCACT
GCCGTGGTGGCGCGTCAGATACTCTCATGATGTTTGCCGTGACTTTTTGA
CCCGTGGCTTGCCATCACCGTGATGAAACTTGGGTCTGCCTCCCCCCCCC
CCAACCGTGCGCCAGGAATAAGCTAGATATCGTGCAGACGGACGTGGTGG
ACGACCCTACATTACAACGGAGCAAGAACGCGATCTGCGAGAAGTGCAAC
TACAACGAGGCCGTCTTCTTCCAGGCAGACGAGGTGTGCTGTGTCCCATG
ACCCCTGGTGTAAAAGGACCATGCGTGAGCATCGAGGGGCGCGTGGTTTG
CCAGTATTTGTTTGTGACCCGAGGTTTCCCTTGGAGACGCTTTTATGGCG
CGGCGCGTAGGATGCGAAGTTCAAGACGTTTTTTCGCGAAGTCAAATTTC
AGAGGCAGCAGCTATATAGTTCACACAGGTTGGCGGGTCATGCTCCCCGC
TCTGCGGTTCTGTTGGTTGAAAACAACCGCCCCAGGCTGCTGTATGTGCG
GTAGACGAAGAGAGACTTGAGCTGGCATTTCTCCCCTCCTGGCGTTGTGA
GGGCTTCCACCATCTCTCTGTCGGGTGTCATGTGCTGGATCAAAGTCCTG
GGCCATTTGCAGCTCTCGCCCACGGCCCAACGCTCCCTTTACGTCTCTCC
CTCTTTCTCTCTGCCGTTTTTTTTGCCATGCAGGGAGCCAAGTCGCAGAG
CTTATCCCTGATTTTTGTGTGCACCAACCGAGCGTGTGGACACAAGTGGG
TCAGTTGATCTTCTGACAGGCTAGGCGTGCTCAACGTGGCTGTACTCATG
CCGGCAGCCTACCGTCAGGCCGTGTTGATCCGGCTGCGGTAGCGGAGAAC
GCCCAGGAGAATCACCTCGAGGTTGTTCCATCCCCGGCCGACTTTTCAGA
GTAGAGGGCAGCAGCTGCGGATATCAGTTGGATCCGCTGCCTGCTTATCT
TTTTTGGTGGCGCAAGGGTAAATCTGCGGAGTTGATCGAGTTGAGCCTCT
ACACTACACTATAGCACCAGCAACGTGTCTGTTCGGGTGCGTGACATTGC
CATGAAACGGCTGGGCCGTTGTGGAGAATCACTCCAGGTCGGGGAACGGC
GGTATTTAAGGCCCAAACCCGTAAGAGACAACAATTAGTCGTCGATCGTA
CGAAGCATTTGGCGTTGCTGGTTAATCGTGATAAGTTTTTGGAGTTGCTG
TATTGTTTGTGTCCTGCCTGTGTATATACAAGAACATGGATGAGGAAAAG
ACAAGGCTGATTCCTGGTAGATGTCGGCGGGGAACAGCACGGTTTTTGTA
GCTCACAGAGTTGCTGTGGTTTTGCACTGTTCTCTGGTTCGGTCAGAGCA
GGCTCGCTTTCCCCCCGGTTGGCGATAAGCGAACTAACGAAAGCCGGGCA
CCTGATGCCTTTTTGTCGCTTCCTTTGCCATACCCCACCGATTTCGCTCC
TCTTGGGACGGGGTATTACTCGGTGTATCATTATTGCGCTGCAACAAAAG
AAAGCCCACAGACAGCAGAGTTGGAGGATAAGGCAGCAGAACTAGGGGGG
AGGATAGCATGGTAAGGGAGAAAGACACAAAATCCTGGCTAATTCTCGCA
GATGAGGAGCTCAAATTGATGGCCGGTAGAAAATGGGAACATGAGTGTTG
ACGGCGATAGGTTCCCGCGGTGGATTCGCACACGTCTCCCTTGTGGGTGA
TTGACCTGAATCGACCGTCCAAAAGACCCGAAAAAAAACTGGTACGAAGA
GGGA

Coding sequence (CDS) from alignment at C-linearis_contig104:208935..212038+

>mRNA_C-linearis_contig104.884.1 ID=mRNA_C-linearis_contig104.884.1|Name=mRNA_C-linearis_contig104.884.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=714bp|location=Sequence derived from alignment at C-linearis_contig104:208935..212038+ (Chordaria linearis ClinC8C monoicous)
AATGGCGGACACCATGCGATTCTGCAGCGAATGTGGCGGACACCATGCGA
TTCTGCAGCGAATGCAACAACATCATGCACCCGAAGGAGAACAAGGCGGA
CCGGAAACTCGTGTACGCGTGCAACCGATGTAGCTACAAGGAGGACGCAC
AGTCGGGATCATGCATCTACAGGAATAACCTCATCACCACTGCAGGCAAC
AACATCATGCACCCGAAGGAGAACAAGGCGGACCGGAAACTCGTGTACGC
GTGCAACCGATGTAGCTACAAGGAGGACGCACAGTCGGGATCATGCATCT
ACAGGAATAACCTCATCACCACTGCAGGGAATAAGCTAGATATCGTGCAG
ACGGACGTGGTGGACGACCCTACATTACAACGGAGCAAGAACGCGATCTG
CGAGAAGTGCAACTACAACGAGGCCGTCTTCTTCCAGGCAGACGAGGAAT
AAGCTAGATATCGTGCAGACGGACGTGGTGGACGACCCTACATTACAACG
GAGCAAGAACGCGATCTGCGAGAAGTGCAACTACAACGAGGCCGTCTTCT
TCCAGGCAGACGAGGGAGCCAAGTCGCAGAGCTTATCCCTGATTTTTGTG
TGCACCAACCGAGCGTGTGGACACAAGTGGGTCAGTTGAGGAGCCAAGTC
GCAGAGCTTATCCCTGATTTTTGTGTGCACCAACCGAGCGTGTGGACACA
AGTGGGTCAGTTGA