mRNA_C-linearis_contig104.873.1 (mRNA) Chordaria linearis ClinC8C monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Homology

BLAST of mRNA_C-linearis_contig104.873.1 vs. uniprot
Match: A0A6H5JEN4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEN4_9PHAE)

HSP 1 Score: 63.5 bits (153), Expect = 5.430e-10
Identity = 27/34 (79.41%), Postives = 30/34 (88.24%), Query Frame = 1

Query:   19 NGLTGFDCCQGKIVASGRLCSVTREAPCFMDTGD 120
            +GLTG DCCQ +I ASGRLCSVTREAPC+MD GD
Sbjct:   41 SGLTGEDCCQNRITASGRLCSVTREAPCYMDGGD 74

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BLAST of mRNA_C-linearis_contig104.873.1 vs. uniprot
Match: D8LL13_ECTSI (Endo-1,3(4)-beta-glucanase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LL13_ECTSI)

HSP 1 Score: 57.8 bits (138), Expect = 6.120e-8
Identity = 24/30 (80.00%), Postives = 27/30 (90.00%), Query Frame = 1

Query:   22 GLTGFDCCQGKIVASGRLCSVTREAPCFMD 111
            GLTG DCCQ +I ASGRLCSVT+EAPC+MD
Sbjct:  809 GLTGEDCCQNRITASGRLCSVTQEAPCYMD 838

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BLAST of mRNA_C-linearis_contig104.873.1 vs. uniprot
Match: D7FRL2_ECTSI (Endo alpha-1,4 polygalactosaminidase precusor n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRL2_ECTSI)

HSP 1 Score: 57.0 bits (136), Expect = 1.140e-7
Identity = 27/48 (56.25%), Postives = 32/48 (66.67%), Query Frame = 1

Query:    1 GCSNRGNGLTGFDCCQGKIVASGRLCSVTREAPCFMDTGDEDSPTPTP 144
            GCSNRG GLTG DCC   I   G LCSV  +APCF+D G+  + +P P
Sbjct:   96 GCSNRGGGLTGDDCCVSNIEEHGALCSVAGQAPCFVD-GEVGTSSPEP 142

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BLAST of mRNA_C-linearis_contig104.873.1 vs. uniprot
Match: A0A6H5JIY0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIY0_9PHAE)

HSP 1 Score: 55.1 bits (131), Expect = 3.220e-7
Identity = 23/37 (62.16%), Postives = 27/37 (72.97%), Query Frame = 1

Query:    1 GCSNRGNGLTGFDCCQGKIVASGRLCSVTREAPCFMD 111
            GCSNRG GL G DCCQ  I  +G +CSVT +APC +D
Sbjct:  189 GCSNRGEGLDGDDCCQSNIEDNGNMCSVTGKAPCMID 225

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BLAST of mRNA_C-linearis_contig104.873.1 vs. uniprot
Match: D8LJ42_ECTSI (FirrV-1-B30 n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJ42_ECTSI)

HSP 1 Score: 54.7 bits (130), Expect = 7.370e-7
Identity = 23/37 (62.16%), Postives = 27/37 (72.97%), Query Frame = 1

Query:    1 GCSNRGNGLTGFDCCQGKIVASGRLCSVTREAPCFMD 111
            GCSNRG GL G DCCQ  I  +G +CSVT +APC +D
Sbjct:  655 GCSNRGEGLDGDDCCQSDIKDNGNMCSVTGKAPCMID 691

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BLAST of mRNA_C-linearis_contig104.873.1 vs. uniprot
Match: D7FWE8_ECTSI (Mannuronan C-5-epimerase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FWE8_ECTSI)

HSP 1 Score: 50.1 bits (118), Expect = 3.170e-5
Identity = 24/46 (52.17%), Postives = 31/46 (67.39%), Query Frame = 1

Query:    1 GCSNRGNGLTGFDCCQGKIVASGRLCSVTREAPCFMDTGDEDSPTP 138
            GCS+RG+GLTG DCC   I+A+G+ C     APC ++ G   SPTP
Sbjct:   42 GCSDRGDGLTGADCCTSDILAAGKACG---SAPCLLEEGS--SPTP 82

The following BLAST results are available for this feature:

BLAST of mRNA_C-linearis_contig104.873.1 vs. uniprot

BLAST of mRNA_C-linearis_contig104.873.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 6

ZOOM

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POSITION

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Match Name	E-value	Identity	Description
A0A6H5JEN4_9PHAE	5.430e-10	79.41	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D8LL13_ECTSI	6.120e-8	80.00	Endo-1,3(4)-beta-glucanase n=1 Tax=Ectocarpus sili...	[more]
D7FRL2_ECTSI	1.140e-7	56.25	Endo alpha-1,4 polygalactosaminidase precusor n=1 ...	[more]
A0A6H5JIY0_9PHAE	3.220e-7	62.16	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D8LJ42_ECTSI	7.370e-7	62.16	FirrV-1-B30 n=2 Tax=Ectocarpus siliculosus TaxID=2...	[more]
D7FWE8_ECTSI	3.170e-5	52.17	Mannuronan C-5-epimerase n=2 Tax=Ectocarpus TaxID=...	[more]